ID   HM989935; SV 1; linear; genomic RNA; STD; VRL; 2057 BP.
XX
AC   HM989935;
XX
DT   15-MAR-2011 (Rel. 108, Created)
DT   28-JUN-2011 (Rel. 109, Last updated, Version 2)
XX
DE   Scophthalmus maximus reovirus segment M6, complete sequence.
XX
KW   .
XX
OS   Scophthalmus maximus reovirus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Aquareovirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-2057
RX   DOI; 10.1186/1471-2164-12-323.
RX   PUBMED; 21689389.
RA   Ke F., He L.B., Pei C., Zhang Q.Y.;
RT   "Turbot reovirus (SMReV) genome encoding a FAST protein with a non-AUG
RT   start site";
RL   BMC Genomics 12(1):323-323(2011).
XX
RN   [2]
RP   1-2057
RA   Ke F., He L.B., Pei C., Zhang Q.Y.;
RT   ;
RL   Submitted (26-JUL-2010) to the INSDC.
RL   State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of
RL   Hydrobiology, Chinese Academy of sciences, Donghu South Road #7, Wuhan,
RL   Hubei 430072, China
XX
DR   MD5; a74d1bffe898f8f4c7d71727a6c41a37.
XX
CC   GenBank Accession Numbers HM989930-HM989940 represent the complete
CC   genome of Scophthalmus maximus reovirus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2057
FT                   /organism="Scophthalmus maximus reovirus"
FT                   /segment="M6"
FT                   /host="Scophthalmus maximus (turbot)"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Jun-2007"
FT                   /note="acronym: SMReV"
FT                   /db_xref="taxon:994485"
FT   CDS             29..1990
FT                   /codon_start=1
FT                   /product="VP5"
FT                   /note="outer capsid"
FT                   /db_xref="GOA:F2WJL1"
FT                   /db_xref="InterPro:IPR009113"
FT                   /db_xref="InterPro:IPR015960"
FT                   /db_xref="InterPro:IPR015962"
FT                   /db_xref="InterPro:IPR036256"
FT                   /db_xref="UniProtKB/TrEMBL:F2WJL1"
FT                   /protein_id="ADZ31981.1"
FT                   /translation="MGNVQTSTNVYNVNGDNNAFTPTSEMVASASPAIDLKPGVLNPNG
FT                   KLYQLEAGSAPDPTNLILVVDASEGDFSYLTNNTWETLSKSALETNSWEPMFSVTMTGC
FT                   GPLKLGDYTVTMSGYVGASPSDAFDGGVIEDGSFISSRRLKNFKLMLSNRCEAIAKWNM
FT                   SLNQAMSLLTPDLLAGSGSCKWKSVLQYMQKVLPSDNEVLQYPDEFYTVAVGKYPALKP
FT                   GSSPDTPPPAAGPLGEIACVMNAASASVGLMSGSSALLTSAMDTLAAKNLDLVCAEAPL
FT                   PVSTFTPSLAPRDYRPAFIKDADAHWVTSITPTTYFRVTTTLSAKNYSVQLGPGATKVL
FT                   DMNRMVDSDLLLDVSGMPIDWMSNPDYATSVAAIVLLESRVPASEISAAEDITGVSIVA
FT                   SSPLSIVNSTVNVRGQHFLEMLHLRTTFERETIAGKPYIYGLGTLLLLSPTTASNSRNP
FT                   TLMDGLLTITPILLRDTTYKGEIVEEIVPSDILGNHTSEEMAVALANDAVVLMENSLKE
FT                   VAEVIGNAVPIASDLDDSATASVVSRLAITETASTRSRSNNPLAFPDFGALWKKAKRAA
FT                   SLFVSNPKSVLQVGVPVLASAGVIDALTSAVGTSVRTGNIGKGVQDALSILKARNSVTK
FT                   LRQGFFSKIEELWPVLEG"
XX
SQ   Sequence 2057 BP; 462 A; 629 C; 501 G; 465 T; 0 other;
     gttttatctc cttgcgccct tctcaatcat gggaaacgtc caaacctcaa ctaacgtcta        60
     caacgtaaac ggcgataaca atgctttcac accaacttcc gagatggtgg cgtcagcttc       120
     gcccgctatt gacctcaaac ccggcgtgct caatcccaat ggcaagctct atcaacttga       180
     ggctggctca gctccagatc ctaccaactt aattttggtg gtcgacgcat cagagggtga       240
     cttctcgtac ctcaccaaca acacatggga gacactcagc aaatcggctt tggagaccaa       300
     ctcctgggaa ccaatgttca gcgtgacgat gaccggttgc ggtccgctca aattgggtga       360
     ctacactgtg acgatgtccg gctacgtcgg tgcctctcca agtgacgcct tcgatggtgg       420
     tgtgatcgaa gatggctcat tcatttccag tcgaagactg aagaacttca agctgatgct       480
     ctccaacagg tgtgaagcca tcgcaaagtg gaacatgtcc ttgaatcaag ccatgtcact       540
     actgactccc gacctgcttg ctggatctgg ttcctgtaag tggaaatccg tcttgcagta       600
     catgcagaaa gtgcttccct ctgacaacga ggtgcttcag tacccagatg agttctacac       660
     cgtggcagtc ggcaagtacc ccgcgctcaa gcccggatcc tcgcccgata ctcccccacc       720
     tgctgcagga ccccttggcg agatagcatg tgtcatgaac gcagccagcg cctccgttgg       780
     tctcatgagt ggatcaagcg cactcctcac ctccgccatg gacaccctgg ctgcaaagaa       840
     tctggatctt gtatgcgctg aagccccgct gcctgtctcc accttcaccc cttcgctagc       900
     gccacgggac tacaggcctg ccttcatcaa agatgcggat gcccattggg tcacgtccat       960
     aaccccgacg acgtactttc gcgtgacgac caccctgtcc gccaaaaact actcggtcca      1020
     gctcggccca ggcgcgacta aagttttgga catgaatcgc atggtcgact cagatctcct      1080
     gctcgatgtc agtggcatgc ccattgattg gatgtctaat cccgactacg ccacctcggt      1140
     cgccgccatc gtcctgttgg agtcacgcgt tccagcttca gagatctccg ccgctgagga      1200
     catcactggc gtttccatcg tggcaagctc gccgctttca atcgtcaatt cgaccgtgaa      1260
     cgtgcgggga caacacttcc tggagatgct ccacttaagg accactttcg aacgtgaaac      1320
     catcgccgga aagccataca tctatggtct cgggactctg ttgctgctgt cccccaccac      1380
     cgcgtcaaac tcacggaacc ccactctgat ggatggtctg ctaaccatca ctccaatcct      1440
     cctgcgtgac acgacctaca agggcgaaat cgtcgaggag atcgtgccct ccgacattct      1500
     cggcaaccac acttcagaag aaatggctgt agcgttagca aacgatgctg tcgttctgat      1560
     ggagaatagc ttgaaggaag tggctgaagt gatcggaaac gccgtcccca tcgcttccga      1620
     tcttgatgac agtgccaccg catcggtcgt aagtcgtctg gccatcaccg agaccgcctc      1680
     tacgcgctca cgatccaaca atcccctcgc attcccagat ttcggagctc tctggaagaa      1740
     agccaagcgc gccgcctcac tgttcgtctc taatccgaaa tctgtactcc aagtcggtgt      1800
     cccagttctc gcatccgccg gggtgatcga tgcactcacg tcagccgttg gcacatctgt      1860
     caggacgggc aacattggaa aaggtgtcca agatgctcta tctattctta aagcacgaaa      1920
     tagtgtgacg aagttgaggc aggggttctt ctcaaagatt gaggagcttt ggccagtact      1980
     cgaaggctag acgtgtggct tgtccacgtc gcgccctaga gccctcgggt gacgccgagg      2040
     ggggatatcc attcatc                                                     2057
//