ID   HM989934; SV 1; linear; genomic RNA; STD; VRL; 2241 BP.
XX
AC   HM989934;
XX
DT   15-MAR-2011 (Rel. 108, Created)
DT   28-JUN-2011 (Rel. 109, Last updated, Version 2)
XX
DE   Scophthalmus maximus reovirus segment M5, complete sequence.
XX
KW   .
XX
OS   Scophthalmus maximus reovirus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Aquareovirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-2241
RX   DOI; 10.1186/1471-2164-12-323.
RX   PUBMED; 21689389.
RA   Ke F., He L.B., Pei C., Zhang Q.Y.;
RT   "Turbot reovirus (SMReV) genome encoding a FAST protein with a non-AUG
RT   start site";
RL   BMC Genomics 12(1):323-323(2011).
XX
RN   [2]
RP   1-2241
RA   Ke F., He L.B., Pei C., Zhang Q.Y.;
RT   ;
RL   Submitted (26-JUL-2010) to the INSDC.
RL   State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of
RL   Hydrobiology, Chinese Academy of sciences, Donghu South Road #7, Wuhan,
RL   Hubei 430072, China
XX
DR   MD5; f3b873cf56f89e2593cd9e97be87bf1c.
XX
CC   GenBank Accession Numbers HM989930-HM989940 represent the complete
CC   genome of Scophthalmus maximus reovirus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2241
FT                   /organism="Scophthalmus maximus reovirus"
FT                   /segment="M5"
FT                   /host="Scophthalmus maximus (turbot)"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Jun-2007"
FT                   /note="acronym: SMReV"
FT                   /db_xref="taxon:994485"
FT   CDS             22..2214
FT                   /codon_start=1
FT                   /product="VP4"
FT                   /note="NTPase"
FT                   /db_xref="GOA:F2WJL0"
FT                   /db_xref="InterPro:IPR012494"
FT                   /db_xref="UniProtKB/TrEMBL:F2WJL0"
FT                   /protein_id="ADZ31980.1"
FT                   /translation="MITIVFIPGHGFNWNDSTPLKYIDSRIYRTRIPKDTLTLFAPAWF
FT                   KSQLEHYVGTHGIEEVYSWCQRLISPLTNRFVLLPRPKSFAKWLLSTPSANIWDIPRWK
FT                   LDLAAAGKAPPDLYDGIHPLLGHDATVTKSVSLIAGHPIVYSRTRHVFGGPLYLATDVS
FT                   AYSGFINQSALDAIFKHDADLPSSRRSAVHITILPNLTNSRSFMLDLPDLTIDPDYPLS
FT                   AFHGHLTRVGQNTTRMMPLDGLCWRLTRGSAKPTWTPEFDEAFRLLRLSRPAASDARPN
FT                   FGTETVLVHVDLTLNVDTRDNSAPRAPLHVHVLNVPLAYLTLMDLKLSQCYPLRTEDGN
FT                   TVPWFLVLVLLSDGVQLAGTKRPVLLQTSIAELQPWWEVTLNAFLNPHAVTVRSGVIKD
FT                   IMGVALALPKGSYKSTFIDVITKNLSNPDAIFPQETVTDSDDLGDSLSPSFENQIMDVW
FT                   HALGTDVLEQGVRAILTPGAYGAVFPIEIYQEFSKLYHDVMIPAQRARAAFISQRGRSL
FT                   VYVHTPYEIVSANVPMQVAPCQIALDSMVNVLIRHKRVGGVTGQVLLDHCYRLMGATTT
FT                   PQPAGLYYRSLFGPWLELAAHPTSTVPIWLETEVSAHTLREVGWSVDGDEPLLINILEG
FT                   LVPTDSVFLVKLPQRVPSRASVVVTAVTDLRISLSPPLPTRMVHSSVLLPVTSVARFMA
FT                   PNRILLAGTSISVRGPVTWMTTSSPVAESGSGPSGP"
XX
SQ   Sequence 2241 BP; 469 A; 711 C; 490 G; 571 T; 0 other;
     gttttatgca cacgcgccag gatgattacg attgtcttca tcccaggtca cggcttcaac        60
     tggaacgact ccaccccact taagtacata gactcccgaa tatatcgaac ccgcatccct       120
     aaagataccc ttaccctatt cgctcccgct tggttcaaat cccagctcga acactacgtt       180
     ggaactcacg gcattgagga agtttactca tggtgccaac gcttgatcag tccccttact       240
     aaccgattcg tcctcctacc ccgacctaag tcattcgcga aatggctctt gtccactccc       300
     tccgctaaca tttgggatat tcctcgttgg aaactcgatc tcgctgctgc aggcaaagcc       360
     cccccggatc tttacgatgg aatacatcca ttattaggtc atgacgccac cgtcaccaag       420
     tctgtctcgc tcatcgctgg tcatcccatc gtctactcac gtacacgtca tgtctttggt       480
     ggtcctcttt accttgccac cgatgtttcc gcctattctg gtttcatcaa tcagtcagcc       540
     ttggacgcca tcttcaagca cgacgctgac cttccgtcct ctcgccgctc agctgttcat       600
     attactatcc tcccaaacct gaccaactcc cgctccttta tgctcgatct acctgacttg       660
     acaatcgacc cagactatcc actttccgcc tttcatggtc atttaacacg tgtaggacag       720
     aacactaccc ggatgatgcc cctagatggc ctatgctggc gactgacacg tggttcggct       780
     aaaccaacgt ggactccaga gttcgatgag gcctttagac tccttcgact ttcccgtccc       840
     gctgcatcgg atgctcgccc taactttgga accgagacgg tgttggttca tgtagatctc       900
     acactaaacg tcgacacccg ggacaattcg gctccccgcg ctccgcttca cgtacacgta       960
     ctgaatgtgc cgctcgccta cttgacattg atggacttaa aactttcaca atgctatcca      1020
     ctccgtacag aagatgggaa caccgtacct tggttcctcg tgctggtcct gctatccgat      1080
     ggagtccaac tggctggtac caagagacca gtgttactac agacatcgat tgccgagtta      1140
     cagccctggt gggaagtgac cttaaatgct ttcctcaatc cccatgccgt gacggtcaga      1200
     tccggagtga ttaaagacat catgggagtg gccctcgccc tacccaaagg atcgtataaa      1260
     tccacgttca tcgacgtgat cactaagaac ttgagtaacc cggacgccat cttccctcag      1320
     gaaactgtca ccgactcgga cgatttaggt gactcgctct cccccagttt cgaaaatcag      1380
     atcatggatg tgtggcatgc tcttgggacc gatgtgttgg agcaaggtgt ccgcgccatt      1440
     ctaactcccg gtgcctacgg cgctgtgttc cccattgaga tatatcagga gttctccaag      1500
     ttgtatcatg acgttatgat ccccgcacaa cgtgctcgcg cggctttcat ctcccaacgt      1560
     ggcaggtcac ttgtttacgt ccacacccca tacgagatag tctctgccaa cgtcccgatg      1620
     caggtagctc cttgccaaat tgccctcgat tcaatggtca acgttctcat tcgtcacaag      1680
     cgtgttggcg gtgtcacagg tcaagtactg ctcgaccatt gctatagatt gatgggtgcg      1740
     acaactactc cgcaacccgc cggactatac taccggtctc tttttggccc atggctcgag      1800
     ctcgcggccc acccaacgtc cacggtcccc atctggctag agacagaggt atccgcccat      1860
     actctacgtg aagtcggctg gtccgttgac ggtgatgagc ctcttctcat taacatcctc      1920
     gagggtcttg ttccgacaga ctccgtcttc ttggtcaagc tgccccagcg tgtaccctca      1980
     cgtgcatccg tcgtcgtaac cgctgttacc gaccttagga tctccttatc cccaccctta      2040
     cccacccgca tggttcactc tagcgtactg ctccccgtta catcagtcgc tcgcttcatg      2100
     gcgcctaacc gcattctact cgccgggacg tcgatctcag tacgtggtcc tgtgacctgg      2160
     atgacaacgt cgtcgcccgt ggcggagagc ggatcagggc cgtcaggtcc gtgaaccccc      2220
     acgagtgtgt gctgattcat c                                                2241
//