ID HM627881; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC HM627881; XX DT 22-NOV-2010 (Rel. 106, Created) DT 22-NOV-2010 (Rel. 106, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate SDDY, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Wang F., Ji W.L.; RT "Molecular Characterization of Tomato Yellow Leaf Curl Virus in Shandong RT Province of China"; RL Unpublished. XX RN [2] RP 1-2781 RA Wang F., Ji W.L.; RT ; RL Submitted (05-JUL-2010) to the INSDC. RL College of Landscape and Horticulture, Qingdao Agricultural University, RL No.700 Changcheng Road, Qingdao, Shandong 266109, China XX DR MD5; 25b66df0f75df86c97448192807d79aa. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato yellow leaf curl virus" FT /host="Lycopersicon esculentum" FT /isolate="SDDY" FT /mol_type="genomic DNA" FT /country="China:Dongying, Shandong" FT /collected_by="Wang Fu and Ji Wen-lei" FT /collection_date="03-Jan-2010" FT /db_xref="taxon:10832" FT CDS 148..498 FT /codon_start=1 FT /product="AV2 protein" FT /db_xref="GOA:E5FXL0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E5FXL0" FT /protein_id="ADQ28117.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRDKQATIMDVQAHV FT PEAQNIQNVSKP" FT CDS 308..1084 FT /codon_start=1 FT /product="AV1 protein" FT /db_xref="GOA:E5FXL1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E5FXL1" FT /protein_id="ADQ28116.1" FT /translation="MSKRPGDIIISTPASKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDS FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRICFYDSISN" FT CDS complement(1081..1485) FT /codon_start=1 FT /product="AC3 protein" FT /db_xref="GOA:E5FXL2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E5FXL2" FT /protein_id="ADQ28114.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITAHSQRPFLMNNDI FT ISIQIRFNHNIRKALGIHKCFLNFRIWTTLRPQTGRFLRVFRYQVLKYLYSLGVISINN FT VIRAVDYVLYDVLENTINVTATHDIKYKFY" FT CDS complement(1226..1633) FT /codon_start=1 FT /product="AC2 protein" FT /db_xref="GOA:E5FXL3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E5FXL3" FT /protein_id="ADQ28113.1" FT /translation="MQSSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHI FT NCNNHGFTHRGTHHCSSSREWRFYMGDKQSPLFQDNSTQPAAISNEQRHHFHSDKIQPQ FT HQEGIGDSQMFSQLPNLDDITASDWSFLKSI" FT CDS complement(1542..2615) FT /codon_start=1 FT /product="AC1 protein" FT /db_xref="GOA:C0KYD3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C0KYD3" FT /protein_id="ADQ28112.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDSRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYISPFLSSSFNQVPDELDEWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDVWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNAIFVTLYEPLFA FT SINQGPTQDSQEETNKA" FT CDS complement(2171..2464) FT /codon_start=1 FT /product="AC4 protein" FT /db_xref="GOA:Q17UU4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q17UU4" FT /protein_id="ADQ28115.1" FT /translation="MGNHISMCLSNSKANTNVRTNGSSTWYPQTGQHISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSIADQLEEVSNLPTTHMPRHSIQAVNPRPSIY" XX SQ Sequence 2781 BP; 758 A; 530 C; 613 G; 880 T; 0 other; accggatggc cgcgccttca ctttttatgt ggtccccacg agggttccac atacgtcact 60 gtcaaccaat caaattgcat cctcaaacgt tagataagtg ttcatttgtc tttatatact 120 tggtccccaa gtagtctgtc ttgcaatatg tgggatccac ttctaaatga atttcctgaa 180 tctgttcacg gatttcgttg tatgttagct attaaatatt tgcagtccgt tgaggaaact 240 tacgagccca atacattggg ccacgattta attagggatc ttatatctgt tgtaagggcc 300 cgtgactatg tcgaagcgac caggcgatat aatcatttcc acgcccgcct cgaaggttcg 360 ccgaaggctg aacttcgaca gcccatacag cagccgtgct gctgtcccca ttgtccaagg 420 gacaaacaag cgacgatcat ggacgtacag gcccatgtac cggaagccca gaatatacag 480 aatgtatcga agccctgatg ttcctcgtgg atgtgaaggc ccatgtaaag tccagtctta 540 tgagcaacgg gatgatatta agcatactgg tattgttcgt tgtgttagtg atgttactcg 600 tggatctgga attactcaca gagtgggtaa gaggttctgt gttaaatcga tatatttttt 660 aggtaaagtt tggatggatg aaaatatcaa gaagcagaat cacactaatc aggtcatgtt 720 cttcttggtt cgtgatagaa ggccctatgg aaacagccca atggattttg gacaggtttt 780 taatatgttc gatagtgagc ccagtaccgc aactgtgaag aatgatttgc gggataggtt 840 tcaagtgatg aggaaatttc atgctacagt tattggtggg ccctctggaa tgaaggaaca 900 ggcattagtt aagagatttt ttagaattaa cagtcatgta acttataatc atcaggaggc 960 agccaagtat gagaaccata ctgaaaacgc cttgttattg tatatggcat gtacgcatgc 1020 ctctaatcca gtgtatgcaa ctatgaaaat acgcatctgt ttctatgatt caatatcaaa 1080 ttaataaaat ttatatttta tatcatgagt tgctgttaca tttattgtgt tttcaagtac 1140 atcatacaat acataatcaa ctgctctgat tacattgtta attgaaatta caccaagact 1200 atataaatac ttaagaactt gatatctaaa tactcttaag aaacgaccag tctgaggccg 1260 taatgtcgtc caaattcgga agttgagaaa acatttgtga atccccaatg ccttcctgat 1320 gttgtggttg aatcttatct gaatggaaat gatgtcgttg ttcattagaa atggccgctg 1380 gctgtgtgct gttatcttga aatagagggg attgtttatc tcccatataa aaacgccatt 1440 ctctgcttga ggagcagtga tgagttcccc tgtgcgtgaa tccatgattg ttgcagttga 1500 tgtggaggta gtatgagcag ccacagtcta ggtctacacg cttacgcctt attggtttct 1560 tcttggctat cttgtgttgg accttgattg atacttgcga acagtggctc gtagagggtg 1620 acgaagattg cattcttgag agcccaattt ttcaaggata tgtttttttc ttcgtctaga 1680 tattccctat atgaggaggt aggtcctgga ttgcagagga agatagtggg aattccccct 1740 ttaatttgaa tgggcttccc gtactttgtg ttgctttgcc agtccctctg ggcccccatg 1800 aattccttga agtgctttaa ataatgcggg tctacgtcat caatgacgtt gtaccacaca 1860 tcattactgt acacctttgg gcttaggtct agatgtccac ataaataatt atgtgggcct 1920 agagacctgg cccacattgt tttgcctgtt ctgctatcac cctcaatgac aatacttatg 1980 ggtctccatg gccgcgcagc ggaagatacg acgttctcgg cgacccactc gtcaagttca 2040 tctggaactt gattaaaaga agaagaaaga aatggagaaa tataaacttc taaaggagga 2100 ctaaaaatcc tatctaaatt tgaacttaaa ttatgaaatt gtaaaatata gtcctttggg 2160 gccttctctt ttaatatatt gagggcctcg gatttactgc ctgaattgag tgcctcggca 2220 tatgcgtcgt tggcagattg ctgacctcct ctagctgatc tgctatcgat ttggaaaact 2280 ccaaaatcaa tgaagtctcc gtctttctcc acgtaggtct tgacatctgt tgagctctta 2340 gctgcctgaa tgttcggatg gaaatgtgct gacctgtttg gggataccag gtcgaagaac 2400 cgttggttct tacattggta tttgccttcg aattggataa gcacatggag atgtggttcc 2460 ccattctcgt ggagttctct gcaaactttg atgtattttt tatttgttgg ggtttctagg 2520 ttttttaatt gggaaagtgc ttcctcttta gagagagaac aattgggata tgttaggaaa 2580 taatttttgg catatatttt aaataaacga ggcatgttga aatgaattgg tgtccctcaa 2640 agctctatgg caatcggtgt atcggtgtct tacttatacc tggacaccta atggctattt 2700 ggtaattttg taaaagtaca ttgcaattca acattcaaaa ttcaaaaatc aaatcaataa 2760 agcggccatc cgtataatat t 2781 //