ID   HM585272; SV 1; linear; genomic RNA; STD; VRL; 1928 BP.
XX
AC   HM585272;
XX
DT   07-MAY-2013 (Rel. 116, Created)
DT   07-MAY-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Southern rice black-streaked dwarf virus isolate Hubei segment S8, complete
DE   sequence.
XX
KW   .
XX
OS   Southern rice black-streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1928
RA   Zhang S., Wu Z., Wei T., Xie L.;
RT   "The complete genome sequence of Hubei isolate of Southern rice
RT   black-streaked dwarf virus, a new member of the genus Fijivirus";
RL   Unpublished.
XX
RN   [2]
RP   1-1928
RA   Zhang S., Wu Z., Wei T., Zhuang J., Xiao D., Lin Q., Xie L.;
RT   ;
RL   Submitted (23-JUN-2010) to the INSDC.
RL   Fujian Agriculture and Forestry University, Key Laboratory of Biopesticide
RL   and Chemical Biology, Ministry of Education, Kingshan, Fuzhou, Fujian
RL   350000, P.R. China
XX
DR   MD5; f4c4813167172ba8c190c96867f33232.
DR   EuropePMC; PMC5549333; 28789694.
XX
CC   GenBank Accession Numbers HM585270-HM585279 represent sequences
CC   from the 10 segments of Southern rice black-streaked dwarf virus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1928
FT                   /organism="Southern rice black-streaked dwarf virus"
FT                   /segment="S8"
FT                   /host="rice"
FT                   /isolate="Hubei"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:519497"
FT   CDS             25..1800
FT                   /codon_start=1
FT                   /product="core capsid"
FT                   /note="inner protein shell of the virion"
FT                   /db_xref="UniProtKB/TrEMBL:R4HGI6"
FT                   /protein_id="AEI59014.1"
FT                   /translation="MIGTYDDRISLRLLFFNLWIKKRPNDPINHRKTKKKQKTMHEIAT
FT                   STDHLVSPSLSEYAEQLADEFAKTKHPIFTPSQLFSTFTRLETIFNRTGHFPDLFSTPI
FT                   KYLGFLIFMPDSSVLFDPPTPEHSYYNLKKNHKMSFSELETLLTAKALTGQIIKTEIND
FT                   FADSFETYYYDPRSERASFGFLRRTAMVRFDFLSYKYNNDLTVTEREKLPTWASNLITR
FT                   MNVVNTSLPYEINCGNINVNQHFAVIVLKNAKTNVTRARFWTVLDDERNFVSIKMDLQA
FT                   ITFERNDQAISGNLKHILNNCVALGEPFVFNALNYCFKITLLETGLSPLDDVATIRMKD
FT                   LLRVFQEGQDIQVIGNKGVGKSEIGKRLSVLYPSLLVVDSDDYGKFLVLLLNLVPSMFK
FT                   NGEFEVDEIALTDDLYFQAMADFISLKQSENDNIDSIFEHIMEGLIEPNTLGNGDIQGE
FT                   AIMDSYNRIFHYIQGSKIVGYRRFITEYVRLMYTNFNKNQTCHFVHSYCELAFVPHSLA
FT                   YITLHSSYNSAVIGILPRNGQSVLSPTRAIANQMLHSFYERYTSNMNPTPAFLLSYFFG
FT                   LTKGINPLTAVSILC"
XX
SQ   Sequence 1928 BP; 596 A; 348 C; 340 G; 644 T; 0 other;
     aagttttttt cgcactgtct aaagatgatt ggcacctatg atgaccggat ttctttaaga        60
     ctattattct tcaacttatg gattaaaaaa cgacccaatg acccaatcaa ccaccgaaaa       120
     acgaagaaaa aacagaaaac gatgcatgaa atcgcaactt cgactgacca tttagtctct       180
     ccttcccttt ctgaatatgc ggaacaacta gcagatgagt ttgcgaaaac taaacatcct       240
     atctttacac cttctcaatt attttccact ttcacgcgtc tagaaacgat ctttaaccga       300
     acaggccatt ttcctgattt atttagcacg cctattaaat accttggatt cttgattttc       360
     atgcctgact cctcagttct cttcgaccca cccactccag aacattctta ttacaattta       420
     aaaaagaatc ataaaatgag cttcagtgaa ttggaaacat tgttaactgc gaaagcattg       480
     acaggtcaaa ttattaaaac tgaaataaat gattttgctg atagttttga aacttattat       540
     tacgatccca gaagtgagag agctagtttc ggctttttga gaagaacagc catggtgaga       600
     tttgatttct tatcctacaa atataacaat gatttgaccg taactgaacg tgaaaaatta       660
     ccaacttggg cttccaattt gatcactcgt atgaacgttg taaacacttc tcttccttac       720
     gaaattaact gtggaaatat taatgtaaat cagcattttg ctgtaatagt tttgaaaaat       780
     gctaagacga atgttactcg agctagattc tggaccgtat tggacgatga gcgcaacttt       840
     gtttcaataa aaatggatct tcaagctatc acctttgaac gtaacgatca ggcaatatct       900
     ggtaatttga aacatatttt aaataattgt gtggctctag gcgagccttt tgtatttaac       960
     gctttaaatt attgttttaa aatcactttg ttagaaacgg gattgtctcc tttggatgat      1020
     gttgccacta tcagaatgaa ggatttgtta cgtgtatttc aagaaggaca ggacattcaa      1080
     gttattggaa acaaaggggt tggaaaatct gagattggaa aaaggttaag tgtgttatat      1140
     ccctctttgc ttgtagttga cagcgatgat tatggtaaat ttttggtatt attgctaaat      1200
     cttgttcctt ccatgtttaa aaacggtgaa tttgaagtcg atgaaatcgc gcttactgat      1260
     gatttgtatt ttcaagcaat ggcagatttt atttctttga aacaatcaga gaatgacaac      1320
     attgactcta tttttgagca tattatggag ggtttaattg aaccgaatac tttgggaaat      1380
     ggtgacattc aaggagaagc tattatggat agttacaatc gcatctttca ttatattcaa      1440
     ggatctaaaa tagtgggata tagaagattc atcactgaat atgttcgttt gatgtatacc      1500
     aattttaata aaaaccaaac ttgtcacttt gttcattctt actgtgaatt agcgttcgta      1560
     cctcattcgc tggcatatat tactcttcac agtagttata actccgcagt tatcggaatt      1620
     cttccacgaa atggtcaaag cgtattaagt cctactcgcg ccattgcgaa tcagatgtta      1680
     cacagcttct atgaacgcta tacatccaat atgaatccca ctcccgcttt tctcctctca      1740
     tatttctttg gtttaaccaa aggaatcaac cctttaacag ctgtgtctat tctttgttaa      1800
     attatacttt gaggaataat acgtcctttt tgggttcgac tcatataacg gtgtttcagt      1860
     ccaatatctt gatggcagac taggtcgatg tagattctag tgaagtgtgc gaaaattcag      1920
     ctgatgtc                                                               1928
//