ID   HM473189; SV 1; linear; genomic RNA; STD; VRL; 1118 BP.
XX
AC   HM473189;
XX
DT   26-JUL-2010 (Rel. 105, Created)
DT   08-JAN-2012 (Rel. 111, Last updated, Version 2)
XX
DE   Onion yellow dwarf virus isolate Egyptian polyprotein gene, partial cds.
XX
KW   .
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1118
RA   Soliman A.M., Mahmoud S.Y.M., Dawood R.A.;
RT   "Molecular Characterization of Onion Yellow Dwarf Virus (Garlic Isolate)
RT   with Production of Virus-free Plantlets";
RL   Int J Virol 8(1):61-70(2012).
XX
RN   [2]
RP   1-1118
RA   Soliman A.M., Dawood R.A., Mahmoud S.Y.;
RT   ;
RL   Submitted (06-JUN-2010) to the INSDC.
RL   Virus & Phytoplasma Section, Plant Pathology Research Institute, 9- El
RL   Gamaa St., Giza 12619, Egypt
XX
DR   MD5; b0c3c24d542dd2324e2e8e3a80aba464.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1118
FT                   /organism="Onion yellow dwarf virus"
FT                   /host="garlic"
FT                   /isolate="Egyptian"
FT                   /mol_type="genomic RNA"
FT                   /country="Egypt"
FT                   /collection_date="10-Jan-2010"
FT                   /PCR_primers="fwd_name: OYDVVKBF, fwd_seq:
FT                   atagcagaaacagctctta, rev_name: OYDVVKBR, rev_seq:
FT                   gtctcygtaattcacgc"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..903
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains RNA polymerase (NIb) and coat protein"
FT                   /db_xref="GOA:E2IFH4"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:E2IFH4"
FT                   /protein_id="ADK46886.1"
FT                   /translation="IAETALRKLYTNIDASEGELEKYYAMYLTLENQEPIIKEVRYQAG
FT                   DTEDAAAQSSDARRIAKQKDKDVDAGTTGKFTVPRIKALSDKMRFPKVGKNVVLNAEHL
FT                   LAYKPEQIELYNTRATQRQFENWFMAVKKEYDVDDEQMKILLDGLMVWCIENGTSPNLS
FT                   GNWTMMDGDEQIEYPLAPILDNAKPTFRQIMAHFSDAAEAYIEYRNATEKYMPRYGIQR
FT                   NLTELSLARYAFDFYEMTSKTPKRAKEAHMQMKAAAVRGATNRLFGLDGNVNTTEEDTE
FT                   RHTAADVNKNQHTLLGIKM"
XX
SQ   Sequence 1118 BP; 387 A; 205 C; 257 G; 269 T; 0 other;
     atagcagaaa cagctcttag gaagctatat accaacatcg acgcgagtga gggcgaactt        60
     gaaaaatatt atgcgatgta tctaacactt gaaaatcaag aacccattat taaagaagtt       120
     cgataccaag ctggagatac agaagatgct gcagcacaat caagtgatgc aaggcgaatc       180
     gcgaagcaga aagataaaga tgtcgatgct ggaaccactg gaaaattcac agtacctaga       240
     atcaaagcac tctccgataa aatgcgattt cccaaagttg gcaagaatgt agtactcaat       300
     gccgaacatc tattagcgta taaaccagaa caaatagagc tatacaatac gagagcgaca       360
     caacgccaat tcgagaattg gtttatggca gtgaagaagg agtatgacgt ggatgatgaa       420
     caaatgaaaa ttttactgga tgggctaatg gtttggtgca ttgaaaatgg tacatctccg       480
     aacctgtcag gtaattggac tatgatggat ggtgatgaac aaattgagta tccattagca       540
     ccaattttag acaatgctaa accaacgttt agacagatta tggcgcattt cagtgatgca       600
     gctgaagcat acattgaata ccgaaacgcc acggaaaaat acatgccccg gtatggaatt       660
     cagcgaaatt taacagaatt gagtttagca cgttacgcat tcgattttta tgaaatgact       720
     tcaaagactc cgaagcgagc gaaagaagca cacatgcaaa tgaaggcggc agcggttaga       780
     ggggcaacta atcgcttgtt tggcctggat ggtaacgtca acacaacaga agaggacacg       840
     gaaagacaca cggctgcaga tgtaaataaa aaccagcaca cgctgctggg cattaagatg       900
     taacatcgca ccaatgtgtc tctagtctta tataaatata tctatgtaag aacgtatgta       960
     atatgtaatt ctcttcgttt cgtttaacct gactttgagc agtaaaatgt ggtgtaccac      1020
     tagttgtggc gaacgatacg gttaaacatc tgtgattaat gtcgagcttc atgagtgtgg      1080
     tttcccacga ggtggatctt agcgtgaatt acagagac                              1118
//