ID HM346941; SV 1; linear; genomic RNA; STD; VRL; 1678 BP. XX AC HM346941; XX DT 03-FEB-2011 (Rel. 107, Created) DT 23-MAR-2011 (Rel. 108, Last updated, Version 2) XX DE Cassava brown streak virus isolate Diani3-1 polyprotein gene, partial cds. XX KW . XX OS Cassava brown streak virus OC Viruses; Riboviria; Potyviridae; Ipomovirus. XX RN [1] RP 1-1678 RX DOI; 10.1099/vir.0.026922-0. RX PUBMED; 21169213. RA Mbanzibwa D.R., Tian Y.P., Tugume A.K., Patil B.L., Yadav J.S., RA Bagewadi B., Abarshi M.M., Alicai T., Changadeya W., Mkumbira J., RA Muli M.B., Mukasa S.B., Tairo F., Baguma Y., Kyamanywa S., Kullaya A., RA Maruthi M.N., Fauquet C.M., Valkonen J.P.; RT "Evolution of cassava brown streak disease-associated viruses"; RL J. Gen. Virol. 92(Pt 4):974-987(2011). XX RN [2] RP 1-1678 RA Abarshi M.M., Maruthi M.N.; RT ; RL Submitted (20-MAY-2010) to the INSDC. RL Natural Resources Institute, University of Greenwich, Blake Building, RL Central Avenue, Chatham Maritime, Kent 44, England XX DR MD5; f83f8819bea6493a8e7068d79b4f37a2. XX FH Key Location/Qualifiers FH FT source 1..1678 FT /organism="Cassava brown streak virus" FT /host="Manihot esculenta" FT /isolate="Diani3-1" FT /mol_type="genomic RNA" FT /country="Kenya:Diani" FT /collection_date="Oct-2008" FT /db_xref="taxon:137758" FT CDS <1..1479 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:E9KZC9" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR002637" FT /db_xref="InterPro:IPR029001" FT /db_xref="UniProtKB/TrEMBL:E9KZC9" FT /protein_id="ADW23653.1" FT /translation="GPYIKWFLKELGLEGVVKMLSAFGDKSAYALCTFAYAHNELSDPI FT VFKGIVNGEIVPPRGNNGFGWDPIFKPDECSYTFAEMPSNIKNNFSHRRRALEKVKLFL FT DNLVVKQEEKKARVALTIDIQALNQEEIEAEITALKKLWKDNGPTRTRSPFEARRLRAP FT QVERVNELLQKLKDEGLQTKKRPCGEPDDGEVVDDDSDDGNNQRSGKEVIDESQNNQQV FT DPKKPKFKIRGDGSAIRRDDIDKIPTNALEIKKTFKPPKVSQSAYIWIPRSQRDNLTPD FT VIQNFLAYIPPSHAIDNQLASGIEVENWAIEVAKAYGVNIQEFYRTILPAWIVNCIVNG FT TSDERKNEKSWRAVELNSQGEDVDDFEYPMEPMYKFALPTMRKVMRNFSSQAILMYQNS FT VAAGKAFVIKAARNAGYTSIENKWLGIDFLAEAQLSQSQLDIKHQILAANVGRTKTRLF FT ALAAPGDDNNVDRERHTTHDVSANRHSYSGAAIE" FT mat_peptide 376..1476 FT /product="coat protein" XX SQ Sequence 1678 BP; 550 A; 252 C; 414 G; 462 T; 0 other; gggccataca tcaagtggtt tttgaaggaa ttgggtcttg aaggtgttgt taaaatgctg 60 tcagcatttg gagataagtc agcgtacgca ttatgcacat tcgcatacgc gcacaatgaa 120 ttgtctgatc caattgtgtt taaaggaatt gtgaatggtg agattgtgcc accacgaggt 180 aacaatggtt ttggctggga tcctatattt aagcctgatg aatgtagtta tacattcgca 240 gaaatgccaa gcaacattaa gaataatttt tcccacagga gaagagcttt agagaaagtg 300 aaattgtttc ttgataactt ggtggtgaag caagaagaga agaaggcaag ggtggctcta 360 acgattgata ttcaggcctt aaatcaggag gaaatagaag cagagatcac tgctttaaag 420 aagctgtgga aagataatgg accaacaaga acgcgtagtc cattcgaggc tagaaggttg 480 agagctccac aagttgagcg tgtgaatgag ttacttcaga aactgaaaga tgaaggattg 540 caaacaaaga agaggccgtg tggagagcca gacgatggag aagtggtaga tgatgatagt 600 gatgatggta ataatcagag atctggaaag gaagtcattg atgagagcca gaataaccaa 660 caagttgatc caaagaagcc gaaattcaaa attagaggag atggaagtgc tattagacgg 720 gatgacattg acaagattcc aactaatgct cttgagatca agaagacgtt taagcctcca 780 aaggtgtcac agtcagctta catttggatt ccacgctctc aaagggataa tctaactcct 840 gatgtaattc agaatttcct ggcatacata cctccatctc atgctataga taatcaactt 900 gcttcaggaa ttgaagttga gaattgggca attgaggtcg ctaaagcata tggagttaat 960 atacaggaat tttatcgcac gattttgcca gcttggatag tgaactgtat agtgaatggt 1020 actagcgatg aaaggaaaaa tgagaagtca tggcgagcag tcgagttgaa ttctcagggg 1080 gaagatgttg atgattttga gtatccaatg gagccaatgt acaaatttgc attaccaact 1140 atgaggaagg taatgagaaa cttttctagt caagcaatcc tcatgtatca gaatagtgtt 1200 gctgcaggta aggcgtttgt gattaaagct gctaggaatg ctggatacac aagtatcgaa 1260 aataaatggc taggtataga ttttcttgcc gaagcccaat tgtctcagag tcaacttgat 1320 atcaagcatc agattttggc agcgaatgtt ggtagaacaa aaacaagact gtttgcacta 1380 gcagctcctg gggatgataa caatgtagat agagaaaggc acacgacaca cgatgtcagt 1440 gcaaacaggc acagctacag tggtgccgca attgaataaa taagatatta gtgtttctaa 1500 ttgagtttga atgagattat agcttagttg ggaagctaag tcatatttca aattcgaatt 1560 caagtactta aatattgtat tttgttttca agtttggtgg agttttggat agccaattat 1620 gttttggttg gataagccag aatgtatttt ggagatcttt ctccatatcc ttttgtta 1678 //