ID HM188458; SV 1; linear; genomic RNA; STD; VRL; 1801 BP. XX AC HM188458; XX DT 31-JAN-2013 (Rel. 115, Created) DT 12-DEC-2013 (Rel. 119, Last updated, Version 2) XX DE Rice black streaked dwarf virus isolate SDTA25 segment S10, complete DE sequence. XX KW . XX OS Rice black streaked dwarf virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-1801 RX DOI; 10.1007/s00705-013-1766-8. RX PUBMED; 23807744. RA Yin X., Zheng F.Q., Tang W., Zhu Q.Q., Li X.D., Zhang G.M., Liu H.T., RA Liu B.S.; RT "Genetic structure of rice black-streaked dwarf virus populations in RT China"; RL Arch. Virol. 158(12):2505-2515(2013). XX RN [2] RP 1-1801 RA Zhu Q.; RT ; RL Submitted (03-MAY-2010) to the INSDC. RL Department of Plant Pathology, Shandong Agricultural University, No. 61, RL Daizong Street, Tai'an, Shandong 271018, China XX DR MD5; d467548b0122610637357c027b89c35c. XX FH Key Location/Qualifiers FH FT source 1..1801 FT /organism="Rice black streaked dwarf virus" FT /segment="S10" FT /host="maize" FT /isolate="SDTA25" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="20-Jul-2008" FT /PCR_primers="fwd_name: P1, fwd_seq: aagtttttttcctcaccca, FT rev_name: P2, rev_seq: gacaatagctgaatttcccccta" FT /db_xref="taxon:10990" FT 5'UTR 1..21 FT CDS 22..1698 FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:L7N7A9" FT /db_xref="InterPro:IPR008618" FT /db_xref="UniProtKB/TrEMBL:L7N7A9" FT /protein_id="ADI33173.1" FT /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNNLFHE FT LNIVKSPHVASSQTTVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKDHIRSFFQNEHQ FT PIFQTLTNNDLSEEFVGVTTFGLSLFATSKLDAEQIERVQIETLTEGNITLKPFSADGL FT EVILDDSYIGIVGKIPGLEVHKLLDKCCREVPAQMGILTDEVKLLMRTGKLRIDGGYDF FT NCPASTTDVTHYGGYDQFSRQMFERLNLFYNISLSIIPVSALKTVHLFEKELSVLDADK FT SLLEQTWSAVASFVETWQVKSKVKADDPDEYELTSLSTLRTNYDGTSASSPFTDKKFID FT WYIKTFSKTEKGSSLRRNELEEKSATSTSTTVKKVKIHFSVQYFDEFKVNGHEKSVVVQ FT THKGEMTLDYYRKIGEVLSAIWKRGKSLAVPCFDYIKLGVEKAFHLAPVILKKYNLTID FT DIINFIDKGPSYLAKLDKIDDWSLISKLIITSVLPNIIQAVYKTDPSDNVMNSVIISRA FT NNLLKSDRDRLLKKALSANVSSSNTSSHEHVQKIVLNKVTR" XX SQ Sequence 1801 BP; 575 A; 329 C; 324 G; 573 T; 0 other; aagttttttt cctcacccat aatggctgac ataagactcg acatagcgcc cgatcttatc 60 cataatggtg taccccagag actttccgat acaataattt taaacaaccg accaacaatc 120 actctgctat ctcatttcaa caatctattt catgaactaa acattgtcaa atcgccccac 180 gttgcatctt cccaaactac tgttaatttg tacattcgta agcatttgtt gacccgactt 240 catgatagac tacaaaccgt agaaactagc actttgccca acattacaca acttaaagac 300 catattcgta gcttttttca aaatgaacac caacctattt ttcagaccct aacgaacaac 360 gacctaagtg aagaatttgt aggtgtgact acttttggac taagcttatt tgctacctcc 420 aaacttgatg ctgaacaaat agaacgtgta caaattgaga ccctaactga aggaaacatt 480 actttgaaac ccttttctgc tgatggttta gaagtcattc tcgatgatag ttatattggt 540 atagttggta aaattccagg tttagaagtt cataaattgc tagataaatg ttgtcgtgaa 600 gttcctgctc aaatgggaat acttactgat gaagttaaac ttttgatgcg tactggtaaa 660 ttaagaattg atggtggtta cgattttaat tgtcctgcaa gcactactga tgttacacat 720 tatggtggtt atgaccaatt ttcacgtcaa atgttcgaac gtttgaatct attttataac 780 attagcctta gcataattcc cgtttcagct ttgaaaacag ttcatttatt tgaaaaagaa 840 ctaagtgttt tagatgcaga taaatcttta ctcgaacaaa cttggagcgc ggtagcgtca 900 tttgttgaaa cttggcaggt taaatctaaa gttaaagccg atgatccaga tgaatatgaa 960 ttgaccagtt tgtccacttt gcgcactaat tacgatggca cctctgcttc tagtcctttt 1020 acagataaga aattcattga ttggtacatt aagacttttt ctaagactga gaaaggatcg 1080 tcgttgcgtc gaaacgaatt agaagagaaa agtgccacta gtacttcaac tacagtaaag 1140 aaggttaaaa ttcatttctc cgttcaatat tttgatgaat ttaaagttaa tggacatgaa 1200 aaaagcgttg tagttcaaac tcataaaggc gaaatgacgt tagattatta tcgtaaaatt 1260 ggcgaagtgt taagtgctat ttggaaacgt ggtaaatctt tggctgtacc ttgttttgat 1320 tacattaagc ttggcgttga gaaagcattt catttagcac ccgtaattct gaagaagtat 1380 aatttgacta ttgatgacat tatcaacttt attgataaag gaccttctta tttagctaaa 1440 ttagacaaga ttgatgattg gtctttaatt tcaaagctta tcattaccag cgttttacct 1500 aatatcattc aagctgttta caaaaccgat ccaagtgata atgttatgaa ctcagtaatc 1560 atcagtagag cgaacaattt gttgaaatct gatagggaca ggctattaaa gaaggcactt 1620 tccgccaacg tttcttcttc caacacatct agtcatgaac atgtacagaa gatagtatta 1680 aacaaagtga caagatgacc actgggagta catccttagt gcgactagtt cagtgctgtg 1740 cgatcttcag ttcattatcg atgccgagtg acgacggcta gggggaaatt cagctattgt 1800 c 1801 //