ID HM149260; SV 3; circular; genomic DNA; STD; VRL; 2760 BP. XX AC HM149260; XX DT 02-AUG-2010 (Rel. 105, Created) DT 20-JUN-2014 (Rel. 121, Last updated, Version 3) XX DE Ageratum enation virus-Papaver somniferum isolate 2 segment DNA-A, complete DE sequence. XX KW . XX OS Ageratum enation virus-Papaver somniferum OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2760 RA Raj S.K., Srivastava A., Snehi S.K., Kumar S.; RT "Ageratum enation virus associated with enations in Papaver somniferum in RT India"; RL Unpublished. XX RN [2] RP 1-2760 RA Raj S.K., Snehi S.K.; RT ; RL Submitted (26-APR-2010) to the INSDC. RL Plant Molecular Virology Lab, National Botanical Research Institute, Rana RL Pratap Marg, Lucknow, U.P. 226001, India XX RN [3] RC Sequence update by submitter RP 1-2760 RA Raj S.K., Snehi S.K.; RT ; RL Submitted (16-APR-2013) to the INSDC. RL Plant Molecular Virology Lab, National Botanical Research Institute, Rana RL Pratap Marg, Lucknow, U.P. 226001, India XX RN [4] RC Sequence update by submitter RP 1-2760 RA Raj S.K., Snehi S.K.; RT ; RL Submitted (17-JUN-2014) to the INSDC. RL Plant Molecular Virology Lab, National Botanical Research Institute, Rana RL Pratap Marg, Lucknow, U.P. 226001, India XX DR MD5; 03122d9a2b479d846f093cd01186ce2a. DR EuropePMC; PMC4353908; 25674770. XX CC On Jun 17, 2014 this sequence version replaced gi:479286141. XX FH Key Location/Qualifiers FH FT source 1..2760 FT /organism="Ageratum enation virus-Papaver somniferum" FT /segment="DNA-A" FT /host="Papaver somniferum" FT /isolate="2" FT /mol_type="genomic DNA" FT /country="India:UP" FT /collected_by="S. K. Snehi and Meenakshi Mahimamayi" FT /collection_date="20-Feb-2010" FT /identified_by="Dr. S. K. Raj" FT /clone="SKS-P" FT /db_xref="taxon:1322247" FT gene 133..480 FT /gene="V2" FT CDS 133..480 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:M9V2W7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:M9V2W7" FT /protein_id="AGJ73649.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL FT ISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHVPRHQSKSMGEQAHEQ FT KAQDVQDVQKS" FT gene 293..1063 FT /gene="V1" FT CDS 293..1063 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /note="involved in virion encapsidation" FT /db_xref="GOA:E2FHQ2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E2FHQ2" FT /protein_id="ADK73489.3" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPMSRVTKARAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKHHTNSVMFFLVRDRRPQDTPQDFGEDFGEVFNMF FT DNEPSTATVKNMHRDRYQVLRKWHATVTGGTYASREQALVRKFVRVNNYVVYNQQEAGK FT YENHSENALMLYMACTHASNPVYATLKIRIYFYD" FT gene complement(1072..1476) FT /gene="C3" FT CDS complement(1072..1476) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancer protein" FT /note="REn; increases viral replication" FT /db_xref="GOA:E2FHQ3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E2FHQ3" FT /protein_id="ADK73490.3" FT /translation="MDSRTGELITAAQAENGVFIWEIQNPLYFKITDHQNRPFLMKEDI FT ITVQIQFNYNLRKALGIHKCFLVYRIWMTSQPQTGRFLRVFKTQVLKYLNNLGVISINN FT VIRSVDHVLWGVLEHNVYVEQSYSIKFNIY" FT gene complement(1217..1621) FT /gene="C2" FT CDS complement(1217..1621) FT /codon_start=1 FT /gene="C2" FT /product="transcriptional activator protein" FT /note="TrAP; transcriptional activator for virus sense FT genes" FT /db_xref="GOA:E2FHQ4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E2FHQ4" FT /protein_id="ADK73491.3" FT /translation="MRSSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALA FT CHNHGFTHRGTHHCSSSREWRVYLGDSKSPVFQDNRSPEPAISHERGHHHRPNTVQLQP FT EESVGDTQVFSSLPNLDDFTASDWSFLKGL" FT gene complement(1524..2609) FT /gene="C1" FT CDS complement(1524..2609) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /note="Rep; involved in virus replication" FT /db_xref="GOA:E2FHQ5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E2FHQ5" FT /protein_id="ADK73492.3" FT /translation="MAPPKRFQIYAKNFFLTYPHCSLTKEDALSQIQNLQTPVNKKYIK FT ICRELHENGEPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSIDVKSYI FT DKDGDTLEWGEFQIDGRFARGGQQTANDAAAEALNAGSKEAAMAIIREKLPEKFIFQYH FT NLNSNLDRIFSPPLEVYVSPFLSSSFDQVPEELEEWVSENVMVAAARPLRPQSIVIEGD FT SRTGKTLWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALRNWALKNAIFVTLEGPL FT YSGSNQSAAQASQEGDEASTC" FT gene complement(2195..2452) FT /gene="C4" FT CDS complement(2195..2452) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M9V2Z8" FT /protein_id="AGJ73650.1" FT /translation="MGNLIFTCLSSSKENTNAKITDSSTWYPQPDQHISIRTFRELNPA FT STSSPTSTRTETPSNGENSRSMEDLHEEVNRQLMMLLQKP" XX SQ Sequence 2760 BP; 764 A; 546 C; 612 G; 838 T; 0 other; accggatggc cgcgattttt ttaaagtggt cccctgacaa agacacgtcc accaatctaa 60 atcgtcgctc aaagcttaat tgttttgtgg tcccttattt aaacttgctc accaagtagt 120 gcactccgca ctatgtggga tccattagta aacgagtttc ccgaaaccgt tcacggtttt 180 agatgtatgt tagcagttaa atatctgcag ttagtagaga agacttattc tcctgataca 240 ttagggcacg atttaattag ggatttaatt tcagtaatta gggctagaaa ttatgtcgaa 300 gcgaccagca gatataatca tttccacgcc cgcttcgaag gtacgccgcc gtctcaactt 360 cgacagccca tatgtgagcc gtgctgctgc ccccatgtcc cgcgtcacca aagcaagagc 420 atgggcgaac aggcccatga acagaaagcc caggatgtac aggatgtaca gaagtcctga 480 tgtccctaga ggatgtgaag gcccatgtaa ggtccagtcg tttgagtcca gacatgacat 540 tcagcatata ggtaaagtca tgtgtgtcag tgatgttacg cgtggaactg ggctgactca 600 ccgagtgggt aaaaggtttt gtgttaaatc cgtttatgtc ttgggtaaga tatggatgga 660 cgaaaatatt aagaccaagc accatactaa cagtgtcatg ttttttttgg tccgtgaccg 720 tcgtcctcag gatacccctc aagattttgg ggaagatttt ggggaagttt ttaacatgtt 780 tgacaatgaa ccgagcacag caacggtgaa gaacatgcat cgtgatcgtt atcaagtctt 840 acggaaatgg catgcgactg tgacgggagg aacatatgca tctagggagc aagcattagt 900 taggaagttt gttagggtta ataattatgt agtttacaat cagcaagaag ctggcaagta 960 tgaaaatcat tctgagaatg cgttaatgtt gtatatggca tgtacgcatg cctctaaccc 1020 agtgtatgct actttgaaga tacggatcta tttctatgat taagtaacaa attaataaat 1080 attaaatttt attgaatatg attgttctac atatacattg tgttctaata caccccataa 1140 aacatgatca actgatctga ttacattatt aatactgata actcctaaat tatttaaata 1200 ttttaaaact tgagtcttaa agacccttaa gaaacgacca gtctgaggct gtgaagtcat 1260 ccagattcgg tagactagaa aacacttgtg tatccccaac gctttcctca ggttgtaatt 1320 gaactgtatt tggacggtga tgatgtcctc tttcatgaga aatggccggt tctggtgatc 1380 tgttatcttg aaatacaggg gattttgaat ctcccagata aacacgccat tctctgcttg 1440 agctgcagtg atgagttccc ctgtgcgtga atccatggtt gtggcaggct aatgctatga 1500 agtatgaaca cccacaaggg agatcaacac gtcgacgcct cgtccccttc ttggctagcc 1560 tgtgctgcac tttgattgga acctgagtag agtgggcctt cgagggtgac gaagatcgca 1620 ttctttaaag cccaatttct gagtgcatta ttcttctctt catccaagaa ctctttataa 1680 cttgaattag gtcctggatt gcagaggaag atagtgggaa ttccgccttt aatttgaact 1740 ggctttccgt atttggtatt tgattgccag tccctttggg cccccatgaa ttctttaaag 1800 tgctttaggt agtggggatc tacgtcatca atgacgttat accacgcatc attgctgtaa 1860 actttggggc ttagatctaa atgaccgcat aggtaattat gaggccctaa tgacctagcc 1920 cacaacgttt tacccgtacg actgtcaccc tcaattacta tactttgagg cctcagaggc 1980 cgcgcagcgg caaccatgac attttctgag acccattctt caagttcttc aggaacttga 2040 tcaaaagaag aagataaaaa aggcgaaaca taaacctcca acggaggact gaaaatccta 2100 tctaaattag aatttaaatt atgatattga aaaataaatt tttctgggag tttctccctt 2160 attatagcca ttgcagcttc tttagagcct gcatttaggg cttctgcagc agcatcatta 2220 gctgtctgtt gacctcctcg tgcaaatctt ccatcgatct ggaattctcc ccattcgagg 2280 gtgtctccgt ccttgtcgat gtaggacttg acgtcgatgc tggatttagc tccctgaatg 2340 ttcggatgga aatgtgctga tctggttggg gataccaggt cgaagaatct gttattttgg 2400 catttgtatt ttccttcgaa ctggataagc acgtgaagat gaggttcccc attttcgtga 2460 agctctctgc agattttgat gtattttttg tttactgggg tttgtaggtt ttggatttgg 2520 gaaagtgcgt cttctttagt aagagagcaa tgtggataag tgagaaagaa atttttggca 2580 tatatttgaa atcgttttgg aggagccatt gacttggtca atcggtactc agctctagtc 2640 ttatgtcaat cggtgatcag tactcaatat atagtgagta ccgaatggca ttattcgtaa 2700 ttctcaaaag aaattcaaaa ttcaaatttg aaatccaaaa gcggccatcc gtataatatt 2760 //