ID HM125563; SV 1; linear; genomic RNA; STD; VRL; 2681 BP. XX AC HM125563; XX DT 01-MAY-2011 (Rel. 108, Created) DT 01-MAY-2011 (Rel. 108, Last updated, Version 1) XX DE Rice ragged stunt virus isolate SX segment 5, complete sequence. XX KW . XX OS Rice ragged stunt virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Oryzavirus. XX RN [1] RP 1-2681 RA Chen Q., Wu M.A., Wu Z.J., Xie L.H.; RT "Phylogenetic evidence for origin and evolution of rice rigged stunt RT virus"; RL Unpublished. XX RN [2] RP 1-2681 RA Chen Q., Wu M.A., Wu Z.J., Xie L.H.; RT ; RL Submitted (15-APR-2010) to the INSDC. RL Institute of Plant Virology, Fujian Agricultural and Forestry University, RL Fuzhou, Fujian 350002, P.R. China XX DR MD5; 3c8fab9af8140814eeef4d73dc6cbb57. XX CC GenBank Accession Numbers HM125559-HM125568 represent sequences CC from the 10 segments of Rice ragged stunt virus. XX FH Key Location/Qualifiers FH FT source 1..2681 FT /organism="Rice ragged stunt virus" FT /segment="5" FT /host="rice" FT /isolate="SX" FT /mol_type="genomic RNA" FT /country="China:Shaxian, Fujian province" FT /collection_date="2006" FT /db_xref="taxon:42475" FT CDS 52..2478 FT /codon_start=1 FT /product="structural protein" FT /note="RRSVs5gp1; P5" FT /db_xref="UniProtKB/TrEMBL:F4YTV0" FT /protein_id="AEC32905.1" FT /translation="MDKFAEIRKRLKQKHNEWLQQTAAERIEQDAGIKMTARTIQGLRI FT TRNSKNDESSLHVDSATDLEMDVTGASKFESKKETFDYRPNTSSSRIVLTPKSNDCKTE FT KKLVSGDDVTEISRPTSSSAVEISELPEVCVKVVFSQPCDVSRYPSDATKVRITKCDHA FT NWRGWRSFLHALGICNREIQDSFLEQAASGCSAHVKDVVTAFDRGENLELLCAMAGVNV FT CLVNVSDEEIELIKISPEPLTCVVRIDFVGSEIKCLPCHATDAALASLFKTALRVYDYG FT RRIPWMHLSETVTFLSLDKTRTRVNVSNLCFDDGWRNIFEALNNDYPELYLVPENGDPE FT ARSRCFIDPERQIEEEERYRAAKEAYLKRMNTPLEWWQEEVLTLTDGEREPKLDEFFFR FT TLLPRIIRQSAHCGDNPTEKLPMIGFGFDAIMKSRAERASQMSIGAKGNAGKEVGLPLR FT YKQHVINFRKREMHQKNSNIMTGYLPGGLLHDTLGGIVICLRLDIFEDTVISVYGIYNG FT MKLIRLICMICVYSGINIPGRPYFVYEVGEGILLTPGMFEEYFTGARTVSRLTSTHGVI FT HLGKLERCVRQFNNYLSAFKIKPGEIIDRSRAPRCKAKEKKFVPRSVGKGVFYASDLAN FT YPFEINRHDKRSGLFHVGEIDFQAAISSIWPQMMCHYMASEDREDKQDDEKSKSDNFLV FT PEAVDPSLVIPSAAIYDCGMSKVNPENAKVKTRGNKLLLPCGMLEHCRATSLTKHRCLL FT PYLGVLACDLPYGSERMPACLGCGRLYPQQILAKLCAQVRCPAWPSTSDCLIRSE" XX SQ Sequence 2681 BP; 759 A; 508 C; 716 G; 698 T; 0 other; gataaaactc tcgaagcaaa cacattcccc cacgcgacca ccgtaaaacc aatggacaag 60 ttcgctgaga tcagaaagag acttaaacag aaacacaatg aatggcttca acagacagca 120 gcagagagaa ttgagcaaga cgcaggaatt aagatgacgg ctcgtacaat tcaaggactg 180 agaatcacca ggaactcaaa gaacgacgag tcaagcctcc acgttgattc cgcaacagac 240 ttggaaatgg atgttactgg cgcgagcaaa tttgagtcga agaaagagac gtttgactat 300 agacctaaca ccagctcgag tcggatcgtt cttaccccaa agtcaaatga ttgtaaaacg 360 gagaagaagt tggtcagcgg agacgatgtc actgaaatca gtcgtccaac atcaagtagc 420 gctgtcgaga tatctgagct gccagaggta tgtgttaaag ttgtgttttc tcagccatgt 480 gatgtcagtc ggtacccatc ggacgcaaca aaagtgagaa taacaaaatg tgatcatgcc 540 aattggagag gatggcgatc gtttttgcac gctttaggca tatgtaaccg cgagatacaa 600 gacagtttct tagaacaggc ggcatcgggt tgttctgcac atgttaagga tgtggttact 660 gcgtttgata gaggtgagaa tttggagcta ctgtgtgcaa tggccggcgt taatgtatgc 720 ttagtcaatg taagtgatga agagattgag ctaatcaaaa tatcgcccga accactgact 780 tgtgttgtac gtatcgattt tgttggctct gagattaaat gtcttccttg tcatgcgacc 840 gacgctgccc ttgcatcttt gtttaaaaca gctctgcgcg tatatgacta tgggcgtcgg 900 ataccttgga tgcacctctc agaaacggta acatttcttt ctctggataa gacgaggaca 960 agagtcaacg tgagtaatct gtgttttgat gatggatggc ggaatatttt tgaagcgttg 1020 aataacgatt atccggagtt gtacctggta ccagagaatg gggacccgga ggcaaggagt 1080 cgctgtttta ttgacccaga gcgacaaatc gaggaggagg agagatatcg cgcagctaaa 1140 gaggcttatc tgaagaggat gaataccccg cttgagtggt ggcaagagga agtcttgacg 1200 ctaactgacg gagagagaga gccaaaactg gatgagtttt tctttcgtac actgctccct 1260 cggattatca gacagagcgc tcactgtgga gacaacccaa ctgaaaagtt gcctatgata 1320 ggcttcggat ttgatgctat tatgaagagt agagctgaac gagcatccca gatgtcgatt 1380 ggggcgaaag gaaatgcggg aaaggaggtt ggattgccgc tgcgctacaa acagcatgtg 1440 attaatttca gaaagcgtga aatgcatcag aagaactcga atatcatgac ggggtatctg 1500 ccaggcggtc tgttacatga tactcttggc gggattgtca tctgtttaag gctagatata 1560 tttgaggata cagtgatcag cgtttatgga atctataatg ggatgaagct gatcagactg 1620 atttgtatga tttgtgtata tagtggtatc aatattccag gacgtcctta ctttgtttat 1680 gaagtaggag aaggcatatt gttaacaccc ggaatgtttg aggagtattt cacaggtgcg 1740 cgaacggtgt cgcggttaac aagtactcat ggtgtgatcc atcttggcaa gcttgaacga 1800 tgcgtgcgtc aatttaataa ttatctgtca gcatttaaga tcaagcctgg tgagataatc 1860 gatcgttcta gagcaccgag atgtaaggct aaagagaaga agtttgtgcc aagaagcgtt 1920 ggtaaaggcg ttttctatgc gtctgatttg gccaactatc cgttcgagat taacagacat 1980 gataaaagat caggattgtt ccatgttggt gagattgact ttcaagccgc catttcttca 2040 atttggcctc agatgatgtg tcattacatg gcaagcgagg atagagagga taagcaggac 2100 gatgagaaat cgaaatcgga caatttcctt gtgcctgaag ccgttgatcc ttctttggtc 2160 attccgtcgg cggcgatcta tgattgtggt atgagcaaag tgaatcctga gaacgctaaa 2220 gtgaagaccc gagggaataa gttactacta ccttgtggaa tgttggagca ttgtcgcgct 2280 actagtctga ccaagcacag atgtctattg ccatatcttg gtgttttagc atgtgatcta 2340 ccttatggtt ctgagagaat gccggcgtgt ttaggatgtg gaagattgta cccacaacag 2400 atcctcgcga aactgtgcgc tcaagtcaga tgtccagcct ggccttctac atcggattgc 2460 ttaataagga gtgagtaatt taataggtat gtacgctttt gaacgcgcgc accaaagtca 2520 ctctcatgat ctcacgcggc gttgaagttt tacgaccgaa gaagggtgtg tttgagccct 2580 gagaaagctg tgagcctcat gcgggacgga tttcgtaatg gctgagtcct tgcgcggttc 2640 gtgacgtatg gggataaccc agtagagagt gacagaggtg c 2681 //