ID HM117903; SV 1; linear; genomic RNA; STD; VRL; 4611 BP. XX AC HM117903; XX DT 16-JUN-2010 (Rel. 105, Created) DT 16-JUN-2010 (Rel. 105, Last updated, Version 1) XX DE Beet necrotic yellow vein virus isolate Pithivier segment RNA2, complete DE sequence. XX KW . XX OS Beet necrotic yellow vein virus OC Viruses; Riboviria; Benyviridae; Benyvirus. XX RN [1] RP 1-4611 RA Gilmer D., Ratti C., D'Alonzo M., Rubies Autonell C.; RT "BNYVV RNA-1 and -2 infectious clones from Pithivier isolate"; RL Unpublished. XX RN [2] RP 1-4611 RA Gilmer D., Ratti C., D'Alonzo M., Rubies Autonell C.; RT ; RL Submitted (14-APR-2010) to the INSDC. RL Institut de Biologie Moleculaire des Plantes Integrative Virology, 12 rue RL du General Zimmer, Strasbourg 67084, France XX DR MD5; 5875ed9c8216f1d152318d88515c469b. XX FH Key Location/Qualifiers FH FT source 1..4611 FT /organism="Beet necrotic yellow vein virus" FT /segment="RNA2" FT /host="Beta vulgaris" FT /isolate="Pithivier" FT /mol_type="genomic RNA" FT /country="France:Yevre-la-ville" FT /collection_date="2002" FT /note="type: P; acronym: BNYVV" FT /db_xref="taxon:31721" FT CDS 145..2217 FT /codon_start=1 FT /transl_except=(pos:709..711,aa:OTHER) FT /product="75k protein" FT /note="p75; readthrough protein; RT" FT /db_xref="GOA:D7RTC3" FT /db_xref="InterPro:IPR001337" FT /db_xref="UniProtKB/TrEMBL:D7RTC3" FT /protein_id="ADI60331.1" FT /translation="MSSEGRYMTWKDMSHNRFMTDRWARVSDVVSVIKQSHAMDLSKAA FT NLSIIKTALAGLGSGWTDNNPFVSPMTRFPQTLTMYGALVLYVNLSDPEFALIMTKIST FT LTDSGLADNASANVRRDVVSGNKAESSGKTAGTNENSAYTLTVSLAGLAQALRLEELMW FT TRDKFEDRLKLPWTPVQGRTSPPGQXQLAAARVTAHIRAAKRALLYPGDSPEWVGWKHF FT YPPPPYDVYDVPPLDIINAKLAADDIGGLVTPTPASSHGLPFEVSEEVEQANRNSLWLT FT VGLLLAALAVGIGVAAYHRKKLQSRLRELKLLWGSTGGSGGGGGFDTELYMRATDTVSL FT GTTLSEHAASAPSGLRHRPAATDSGPHEALPFEVWVFDNLAVVYDSIGMSDLFYTVREF FT VGVFNGEFEGLIELLESPDDDDGVYTNAPRDTAIDAYESQENYDRIDIETVLLERRINL FT KKLLLEEAELERRERDMTMIADEEQRTLLHRLESSRVEATHAVAKAEADARAAVAMAAL FT ASKEANDYDSKMAFDRSCKEQELRLRELEVNSMPSKTERYVHTGIQGGAQLAGAMAVGA FT MLRRGASSSSQTVSSGANIGSRSQSLTRGRSASQPLSSVGGSTRGVNNNISNTNLVRAG FT NSAEVSAGRSTNSGNSNFWSKLRVGEGWSKYSVERAATRAQRAIMLPAPPSAPAG" FT CDS 145..711 FT /codon_start=1 FT /product="21k protein" FT /note="coat protein; p21; CP" FT /db_xref="GOA:Q9YIL1" FT /db_xref="InterPro:IPR001337" FT /db_xref="UniProtKB/TrEMBL:Q9YIL1" FT /protein_id="ADI60330.1" FT /translation="MSSEGRYMTWKDMSHNRFMTDRWARVSDVVSVIKQSHAMDLSKAA FT NLSIIKTALAGLGSGWTDNNPFVSPMTRFPQTLTMYGALVLYVNLSDPEFALIMTKIST FT LTDSGLADNASANVRRDVVSGNKAESSGKTAGTNENSAYTLTVSLAGLAQALRLEELMW FT TRDKFEDRLKLPWTPVQGRTSPPGQ" FT CDS 2130..3284 FT /codon_start=1 FT /product="42k transport protein" FT /note="TGB-p1; p42" FT /db_xref="GOA:D7RTC5" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:D7RTC5" FT /protein_id="ADI60332.1" FT /translation="MVQVQRRTGGDKGAKGNYASSAPVRSRRMTQDDWSRTHPDDIFSV FT IEKTLVEDGYKWNGVKPGHCDWGKLKESGAIDNFRGTLEGELGKNCDLTCNAAAVKLDT FT LQKVKMSSDWTARVGIVLGAPGVGKSTSIKNLLDKFGAKHKMVLCLPFSQLLEGVFAGR FT LDTFLVDDLFCRSVEYGKYNTMLVDEVTRVHMCEILVLAGHLGVKNVICFGDPAQGLNY FT KAGSAVNYNFPIIAECYASRRFGKATADLINSSNGGGKPVVGNNEVKDSWTFEELCGKI FT LDMSTVLVATRETQKFLLEDNIESILYSDAHGQTYDVVTIILEDEFDDAAICDPNVRAV FT LLTRARKGGMIKMGPNIAARFKNGDFNSRGVSKSCTGDTFCEDR" FT CDS 3284..3640 FT /codon_start=1 FT /product="13k transport protein" FT /note="TGB-p2; p13" FT /db_xref="GOA:Q77NT3" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q77NT3" FT /protein_id="ADI60333.1" FT /translation="MSREITARPNKNVPIVVGVCVVAFFVLLAFMQQKHKTHSGGDYGV FT PTFSNGGKYRDGTRSADFNSNNHRAYGCGGSGGSVSSRVGQQLVVLAIVSVLIVSLLQR FT LRSPPEHICNGACG" FT CDS 3624..4022 FT /codon_start=1 FT /product="15k transport protein" FT /note="TGB-p3; p15" FT /db_xref="GOA:D7RTC7" FT /db_xref="InterPro:IPR010470" FT /db_xref="UniProtKB/TrEMBL:D7RTC7" FT /protein_id="ADI60334.1" FT /translation="MVLVVKVDLSNIVLYIVAGCVVVSMLYSPFFSNDVKASSYAGAVF FT KGSGCIMDRNSFAQFGSCDIPKHVAESITKVATKEHDADVMVKRGEVTVRVVTLTEIIF FT IILSRLFGLAVFLFMICLMSIVWFWCHR" FT CDS 4034..4423 FT /codon_start=1 FT /product="14k protein" FT /db_xref="InterPro:IPR009884" FT /db_xref="UniProtKB/TrEMBL:B6CMJ2" FT /protein_id="ADI60335.1" FT /translation="MSMGMVDSLCVFVGRVITEGSESVEGVERFSIKFSEWKLFTTAVY FT VEYRQLGEKECSLKDVGRLHFNMSCVKCCRKLKCKKQNKNHSKHVQNGYLRKVRNFSIL FT GVCGDCCESFTLADEKHHVIVDPEV" XX SQ Sequence 4611 BP; 1199 A; 767 C; 1212 G; 1433 T; 0 other; aaattctaac tattatctcc attgaataga atttcaccgt ctgttggttc ttattttgtt 60 ctgggggcaa ttttattcag ggccctactt taaatatagg tgcgagtaat aagtagccgc 120 cgtccagaag aagatagtac taacatgtcg agtgaaggta gatatatgac atggaaggat 180 atgtcacata ataggtttat gaccgatcga tgggcccgtg tttcggacgt cgtgagtgtt 240 attaaacaat cgcatgctat ggacttgtcc aaggctgcga atctatctat aattaaaact 300 gctttggcag gattaggctc gggttggact gacaataatc cttttgtgtc cccgatgacc 360 cgttttccac agacactaac tatgtacggt gcacttgtgt tatatgttaa tctgtctgac 420 ccagaatttg cgttgataat gactaagata agtactttaa ctgattcagg gttagcagat 480 aacgcatctg ctaatgtgcg tagagatgtg gtgtccggaa ataaagccga atcatccggt 540 aaaactgctg gcactaatga gaattctgct tatacgctta ccgttagtct tgctggtttg 600 gctcaagctc ttaggcttga ggaattaatg tggactcggg ataagtttga ggaccggttg 660 aaattaccat ggacacctgt tcaaggtaga accagtccac ccggacaata gcaattagct 720 gctgctcggg tgacggcaca cattcgagca gcgaagcggg cactattata tcctggtgat 780 agtcccgagt gggttggttg gaaacatttc tatcctcctc caccatatga tgtgtacgat 840 gtgccaccgc tggatattat taacgccaaa ttggctgctg atgatatcgg cggtcttgtt 900 actcctacac cggcatcttc acatggtctt ccttttgaag tttccgagga agttgagcag 960 gcaaatagga atagtctatg gctaacagtt ggactgctat tagctgcttt ggcagttggg 1020 attggtgtag ctgcttatca taggaagaag ctccaaagta gattacgtga gttaaaattg 1080 ctatggggtt ctactggtgg gtctggtggt ggtggtggtt ttgacaccga gctgtatatg 1140 cgcgctacag atactgttag tttgggaacc actctttcag agcatgctgc ttcagctccg 1200 tcggggttac ggcaccgacc tgctgctact gatagtggac ctcatgaagc actgccgttt 1260 gaggtgtggg tgtttgataa tctagctgta gtgtatgatt cgattggtat gagtgattta 1320 ttttatactg ttagagagtt tgttggggtg ttcaacggtg agtttgaagg gcttatagag 1380 ctgttagagt cacccgatga tgatgatggt gtgtatacca atgctcctag agacactgcc 1440 attgatgcct atgaatccca agaaaactac gatcgtattg atattgaaac tgtcttgctc 1500 gagaggcgta taaacttgaa aaagctgctt cttgaagaag cagagctaga acgacgagag 1560 cgagatatga ccatgattgc tgatgaagaa caaagaacat tattacatag gttggaaagt 1620 tctagggttg aagcaactca tgcagttgcc aaagccgaag ctgatgctcg ggcagctgtt 1680 gctatggctg ctcttgcttc caaggaagct aatgattacg acagtaagat ggcttttgac 1740 aggtcttgta aagaacagga actgcggttg cgcgaactcg aagtgaatag tatgccgagt 1800 aaaacagaga ggtatgttca tactggtata caaggtggcg cgcaattggc tggagctatg 1860 gctgttggtg ctatgctgcg acgtggggcc agttcttctt ctcaaaccgt ttctagtggt 1920 gctaatattg gttcccgctc acagagtttg actcgtggtc gtagtgcatc acaacctttg 1980 tcatcagttg gtggttctac tcgtggggtt aataataata ttagtaatac taatcttgtt 2040 agggctggta atagtgctga agtttctgct ggtagatcta ctaatagtgg taatagtaac 2100 ttttggtcca aattgcgtgt tggtgaagga tggtccaagt acagcgtaga acgggcggcg 2160 acaagggcgc aaagggcaat tatgcttcca gcgcccccgt ccgctcccgc cggatgactc 2220 aggatgactg gtcacgtacc catcccgacg atattttctc agttattgag aaaacactag 2280 tagaggatgg gtataaatgg aacggggtaa aacccggaca ttgcgattgg ggcaaattga 2340 aggaatctgg tgctattgat aattttaggg gtacattaga aggcgagtta ggtaaaaatt 2400 gtgatttaac ttgtaatgct gctgccgtta aacttgacac attgcaaaag gtgaaaatgt 2460 catcagattg gactgccaga gttggtattg ttttgggtgc tcctggtgtt gggaaatcta 2520 cctcgattaa gaacttatta gacaaatttg gagcaaaaca taaaatggtg ttatgcttac 2580 cttttagtca gttgttagaa ggagtgtttg ctggtcggtt ggacactttt ctggttgatg 2640 atttgttctg taggtccgtg gaatatggaa aatacaacac catgcttgta gatgaggtca 2700 ctcgtgtgca tatgtgtgag attttggtac ttgccggaca tttaggtgtt aagaacgtga 2760 tatgttttgg tgatccggcg caagggttaa attataaggc cggttctgcc gtgaactata 2820 attttccgat tattgctgaa tgttatgcta gtagacggtt cggtaaggcg actgccgatc 2880 tcattaattc cagcaatggt ggtggtaaac ctgtagtcgg taataacgag gtaaaggata 2940 gttggacttt tgaagaacta tgtgggaaga tactagatat gtctactgtt ttggtagcaa 3000 cacgcgaaac ccaaaagttt ctattagaag ataatattga gtctattctt tactcggacg 3060 cccacgggca aacatacgac gttgtcacta tcattttgga agacgagttt gatgatgctg 3120 ccatttgcga cccaaatgtt agggctgtct tgttaactag agctcgtaag ggtggtatga 3180 ttaagatggg tcctaacatt gctgccaggt tcaaaaacgg tgattttaat tcacgtggag 3240 ttagtaagtc ttgcaccgga gatacttttt gcgaagatag ataatgtcta gggaaataac 3300 cgctcgaccc aataagaatg tgcctattgt tgttggtgtt tgtgttgtgg ctttctttgt 3360 attgctggcg ttcatgcagc aaaaacataa gacacattct gggggcgatt acggagtccc 3420 aacattttct aacggtggta aatatagaga cggcacaagg tcagctgatt ttaatagtaa 3480 taatcatcgt gcttacgggt gcggtgggtc tgggggtagc gttagtagtc gagtcgggca 3540 gcaacttgtt gtgttagcta ttgtgtctgt gttgatagta tcactgttac aacgattaag 3600 atctccacca gaacatattt gtaatggtgc ttgtggttaa agtagattta tctaatattg 3660 tgttgtatat agttgccggt tgtgttgttg ttagcatgtt gtactcacca tttttcagca 3720 acgatgttaa agcgtccagc tatgcgggag cagtttttaa agggagtggc tgtatcatgg 3780 acaggaattc gtttgctcaa tttgggagtt gcgatattcc gaagcatgta gccgagtcca 3840 tcactaaggt tgctaccaaa gagcacgatg ctgatgtaat ggtaaaaaga ggtgaagtga 3900 ccgttcgtgt tgtgactctc accgaaatta ttttcataat attatctaga ttgtttggtt 3960 tggcggtgtt tttgttcatg atatgtctaa tgtctatagt ttggttttgg tgtcatagat 4020 aaattgtggt agaatgagta tggggatggt agatagtttg tgcgtgtttg ttggtcgagt 4080 cataactgag ggatctgaaa gtgttgaggg tgtggaacgg ttttccatta agtttagtga 4140 gtggaaattg ttcaccaccg cggtgtacgt tgaatatcgt cagttaggtg agaaagagtg 4200 tagtttgaag gatgttggta ggttacattt taatatgtca tgtgtgaaat gctgtcgaaa 4260 acttaaatgc aagaaacaaa ataaaaatca tagtaaacac gtccaaaatg gatatttacg 4320 caaggtgcgt aatttttcca ttttaggtgt ttgcggtgat tgttgtgagt cttttacact 4380 tgcggacgaa aaacatcatg ttattgtcga tcctgaggtg taacaggatt tattcaagag 4440 actatgttta atattaataa tcagggccat gccacaggcc tcctattggg ttgttccgaa 4500 ggttgttgtg gtttatattg cttattggta agtgatttga ttaaggttgc agtgtactga 4560 ctgggtgtga attgtaccag tccatgtagg gtctgttttc agtatattga a 4611 //