ID HM015518; SV 1; linear; genomic RNA; STD; VRL; 4787 BP. XX AC HM015518; XX DT 08-DEC-2010 (Rel. 107, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Tomato spotted wilt virus isolate Llo2TL3 segment M, complete sequence. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4787 RX PUBMED; 20881087. RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT "Evolutionary analysis of tomato Sw-5 resistance breaking isolates of RT Tomato spotted wilt virus"; RL J. Gen. Virol. 92(1):210-215(2011). XX RN [2] RP 1-4787 RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT ; RL Submitted (20-MAR-2010) to the INSDC. RL COMAV-Universidad Politecnica de Valencia, Camino de Vera 14, Valencia RL 46022, Spain XX DR MD5; 539809e6b4c5d22772929a008e7113d9. XX FH Key Location/Qualifiers FH FT source 1..4787 FT /organism="Orthotospovirus tomatomaculae" FT /segment="M" FT /host="Solanum lycopersicum" FT /isolate="Llo2TL3" FT /mol_type="genomic RNA" FT /country="Spain: Barcelona" FT /collection_date="2005" FT /proviral FT /note="biotype: T: Tomato Sw-5 resistance breaking" FT /db_xref="taxon:3052585" FT gene 101..1009 FT /gene="Nsm" FT CDS 101..1009 FT /codon_start=1 FT /gene="Nsm" FT /product="putative movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:E5EW91" FT /protein_id="ADR66479.1" FT /translation="MLTFFSNKGSSKSAKKDEGPLVSLAKHNGNVEVSKPWSSSDEKLA FT LTKAMDTSKGKILLNTEGTSSFGTYESDSITESEGYDLSARMIVDTNHHISNWKNDLFV FT GNGKQNANKVIKIYPTWDSRKQYMMISRIVIWVCPTIPNPTGKLVVALVDPNMPSEKQV FT ILKGQGTITDPICFVFYLNWSIPKTNNTPENCCQLHLMCSQEYKKGVSFGSVMYSWTKE FT FCDSPRADKDKSCVVIPLNRAIRARSQAFIEACKLIIPKGNSEKQIKKQLKELSSNLER FT SVEEEEEGISDSVAQLSFDEI" FT CDS complement(1296..4703) FT /codon_start=1 FT /product="glycoprotein precursor" FT /note="precursor of glycoproteins Gn and Gc" FT /db_xref="GOA:E5EW92" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:E5EW92" FT /protein_id="ADR66480.1" FT /translation="MRILKLLELVVKVSLFTIALSSVLLAFLIFRATDAKVETIRGDHP FT EVYDDSAENEVPTAASIQRKAILETLTNLMLESQTPGTRQIREEESTIPIFAESTTQKT FT ISVSDLPNNCLNASSLKCEIKGVSTYNVYYQVENNGVIYSCVSDSAEGLEKCDNSLNLP FT KRFSKVPVIPITKLDNKRHFSVGTKLFISESLTQDNYPITYNSYPTNGTVSLQTVKLSG FT DCKITKSNFANPYTVSITSPEKIMGYLIKKPGENVEHKVISFSGSASITFTEEMLDGEH FT NLLCGDKSAKIPKTNKRVRDCIIKYSKSIYKQTACINFSWIRLILIALLIYFPIRWLVN FT KTTKPLFLWYDLIGLITYPILLLINCLWKYFPFKCSNCGNLCITTHECTKICICNKSKA FT SKEHSSECPILSKETDHDYNKHKWTSMEWFHLIVNTKLSFSLLKFVTEILIGLVILSQM FT PMSMAQTTQCLSGCFYVPGCPFLVTSKFEKCPEKDQCYCNVKEDTIIESIFGTNIVIEG FT PNDCIENQNCIAHPSIDNLIKCRLGCEYLDLFRNKPLYNGFSDYTGSSLGLTSVGLYEA FT KRLRNGIIDSYNRTDKISGMIAGDSLNKNETSIPENILPRQSLIFDSVVDGKYRYMIEQ FT SLLGGGGTIFMLNDKTSETAKKFVIYIKSVGIHYEVSEKYTTAPIQSTHTDFYSTCTGN FT CDTCRKNQALTGFQDFCITPTSYWGCEEAWCFAINEGATCGFCRNIYDMDKSYRIYSVL FT KSTIVADVCISGILGGQCSKITEEVPCENALFQADIQADLHNDGITIGELIAHGPDGHI FT YSGNIANLNDPVKMFGHPQLTHDGVPIFTKKTLEGDDMSWDCAAIGKKSITIKTCGYDT FT YRFRSGLEQISDIPVSFKDFSSFFLEKAFSLGKLKIVVDLPSDLFKVAPKRPSITSTRL FT NGNGCLLCGQGLSCILEFFSDLTFSTSISIDACSLSTYQLAVKKGANKYNITMFCSANP FT DKKKMTLYPEGNPDISVEVLVNNVVVEEPENIIDQNDEYAHEEQQYNSDSSAWGFWDYI FT KSPFNFIASYFGSFFDTIRVILLIAFIFLVIYFCSILTTICKGYVKNKSYKSRSKIVDD FT DDSEIKAPMLMKDTMTRRRPPMDFSHLV" XX SQ Sequence 4787 BP; 1551 A; 849 C; 841 G; 1546 T; 0 other; agagcaatca gtgcatcaga aatataccta ttatacactt tgctaagaat caatcaatta 60 cattacacaa gctcctctac cttaggctgt tgaactcaaa atgttgactt ttttcagcaa 120 taaggggtct tctaagtctg ccaaaaagga tgaaggtcct ttagtttcac tagctaaaca 180 taatggtaat gtagaagtct caaaaccatg gtcttcttct gatgaaaagc ttgctttgac 240 taaagctatg gatacatcca aaggaaagat actgttgaac acagagggaa catcttcctt 300 tggaacctat gaatctgatt ctatcacaga atcagagggt tatgatcttt ctgcaagaat 360 gatagtagat acaaaccatc atatctcaaa ctggaaaaat gatctttttg ttggcaatgg 420 gaagcagaac gctaataagg tcatcaagat ctatccaact tgggacagca gaaaacaata 480 catgatgatt tccaggattg tgatatgggt ctgccccact ataccaaacc ctacagggaa 540 acttgtggtt gccctagttg atcccaacat gccatctgaa aagcaagtca ttctgaaggg 600 tcaagggaca ataactgatc ctatatgttt tgtcttttat ctgaactggt ctattccaaa 660 aacaaacaac actccagaaa actgctgtca gctgcatttg atgtgcagcc aagaatacaa 720 gaaaggggtt tcttttggta gtgtcatgta ttcttggaca aaggagtttt gtgattcacc 780 cagagctgat aaagacaaaa gttgtgtggt tatacctcta aacagagcta ttagagctag 840 atctcaagca ttcattgagg cttgcaagct gataattcct aaaggaaaca gtgagaagca 900 gattaaaaaa cagcttaaag agttgagctc aaatcttgag agatcagttg aagaagaaga 960 ggaagggatt tctgatagtg ttgctcagtt atcttttgat gaaatatagt acttttaata 1020 ccacttattt aagcttaaat ttctgttaat tttgcatttt aaaatcaaaa aacaaaacaa 1080 aaaacaaaaa acaaaaagaa aaacaaaaaa caaaaaaaat caaaaacaga aaacaaaaac 1140 aaaataaggc tgaaaagcca aactttggtc cgaagactct ttttgttgtt ttttgtttat 1200 ttgtattttt tgtttgttgt tttttgttta ttttatatat acataatctg actaatgtag 1260 aaaattgaat caaatttagc ctgtgacaag cagcctcaga caaggtgaga gaaatccata 1320 ggtggccttc gtcttgtcat tgtatctttc attaacatag gggctttgat ctcagaatca 1380 tcatcatcca ctatcttgga tctagattta taagatttat tcttgacata tcctttacaa 1440 atggttgtta gaatagaaca gaaataaatc acaaggaaaa tgaatgcaat aagcaatatc 1500 actctgatag tatcaaaaaa cgagccaaaa taacttgcaa tgaaattgaa tgggctctta 1560 atataatccc agaaacccca tgctgaagaa tcagaattat attgttgttc ttcatgagca 1620 tactcatcat tttgatctat tatgttctct ggttcttcta cgacaacatt attgaccaga 1680 acctccacag aaatatctgg attgccttct ggatacaacg tcatcttctt cttgtccgga 1740 ttagcagaac aaaacattgt tatgttgtat ttatttgccc cttttttaac agccagttga 1800 taagtagata gagagcaagc atctatagaa attgaagtag aaaatgtcaa atccgagaaa 1860 aattctaaga tgcaagataa accttgaccg catagaagac agccgttgcc atttaatctt 1920 gttgaagtta tggaaggtct cttaggagca actttaaaaa gatcagatgg aagatcaacg 1980 acaatcttga gtttgcctaa actgaaagct ttttccaaga aaaaactaga gaaatctttg 2040 aaactaacag gaatatctga tatttgctct aaaccagatc taaatctgta tgtatcatat 2100 ccgcatgttt taatagtgat tgattttttc cctattgctg cacaatccca agacatgtca 2160 tctccttcta gagttttctt agtaaaaata ggcactccat catgagtcaa ttgtgggtga 2220 ccaaacattt tgacaggatc attcaagttt gcaatatttc cagaataaat atggccatca 2280 ggtccatgag ctatcagttc acctatagtg ataccatcat tgtgcagatc tgcttgtata 2340 tcagcttgaa acaaggcatt ttcacaagga acctcttcag tgatctttga gcactgacct 2400 cctaaaatac cagaaataca aacatctgcc actatagttg attttagcac tgaataaatt 2460 ctgtatgatt tatccatgtc atagatattc cgacagaatc cacatgtagc accttcatta 2520 attgcaaaac accaagcttc ttcacatccc caataagaag ttggtgttat acaaaaatct 2580 tggaaacctg ttaaagcttg attttttctg caagtgtcac agtttcctgt acaagttgaa 2640 taaaaatctg tgtgagtact ttggataggg gctgttgtgt atttttctga cacttcataa 2700 tgaattccca cacttttgat ataaatcaca aattttttgg ctgtttctga ggtcttatca 2760 ttcaacatga atatagtccc tcctcctcct aaaagagatt gttctatcat gtatctatat 2820 ttcccgtcta caacagaatc aaagatcaat gattgtctag gcagaatgtt ctctggtatg 2880 cttgtttcat ttttgtttag agagtctcct gcaatcattc cagaaatttt gtctgtacga 2940 ttataagaat ctattatacc attcctcaat ctcttggctt catacagacc aaccgatgtt 3000 aaccctaaag agcttcctgt ataatctgaa aatccattat acaaaggttt gtttctaaat 3060 aaatctaggt attcgcaacc taatctgcat tttataagat tatcgataga tgggtgtgca 3120 atgcaattct ggttttctat gcaatcatta ggaccttcta taacaatgtt agtgccaaag 3180 atactttcta taatcgtatc ttcttttaca ttacagtaac attgatcttt ttcagggcat 3240 ttttcaaatt tgcttgtaac caaaaacgga cagcctggaa cataaaaaca cccacttaaa 3300 cattgggtag tttgagccat agacatgggc atttgagaca aaatgaccaa acctattaag 3360 atttcagtca caaattttag caaactaaag ctcagcttag tgttcactat tagatggaac 3420 cattccatgc tagtccactt atgtttgttg tagtcatgat ctgtttcttt ggataatatg 3480 ggacactctg aagaatgttc ttttgaagct ttgcttttgt tgcagatgca aattttagta 3540 cattcatgtg tggttatgca caaattgcca cagttagaac atttaaatgg aaaatatttc 3600 cataagcaat ttatgagcaa caaaataggg tatgtgatca agcctataag atcataccag 3660 agaaagaggg gtttggttgt cttgtttact agccaccgga tagggaaata gatcaacaaa 3720 gctatcaata ttaatcttat ccaagaaaaa ttgatgcagg ctgtttgttt ataaatgctt 3780 tttgaatatt tgattatgca atctctaact cttttgtttg tttttggtat tttagctgat 3840 ttgtcaccgc acaagagatt gtgctcacca tccaacattt cctcagtaaa agtgatgctt 3900 gctgatccag aaaaagatat gaccttgtgt tccacatttt caccaggctt ttttatcaaa 3960 taacccatga tcttctcagg gctagtgatg ctaacagtgt agggattcgc aaagtttgat 4020 ttagttattt tgcaatcgcc agataacttc acagtttgta atgatactgt tccattagta 4080 gggtacgagt tataagttat aggataatta tcttgtgtca ggctttctga aatgaagagt 4140 tttgttccaa ctgaaaaatg ccttttgttg tcaagtttag taatgggaat aaccgggact 4200 ttagagaatc tttttggcag atttaaagaa ttgtcacatt tttctaaacc ttctgctgaa 4260 tcagaaacac aggaatatat gacaccatta ttttccactt gataataaac attataagtg 4320 gatacccctt ttatctcaca ttttaatgaa gaagcattca agcagttgtt aggaagatcc 4380 gagacagaga tcgttttttg cgtagttgat tcagcaaaaa tagggatggt tgattcttct 4440 tctcgtatct ggcgggttcc aggagtctga gattctagca tcagattagt taaagtctcc 4500 aagatagcct tgcgttgaat tgatgcagca gtgggtactt cattctcagc agaatcatca 4560 taaacctcag gatggtctcc acgaattgtt tctactttgg catctgtggc tctgaagatc 4620 aagaatgcca acaagacaga actcagggca attgtgaaaa gactcacttt taccactagt 4680 tctagtagtt ttaaaattct catcttagac gtctgcccag attataatgg ttatatgatt 4740 aatttcaaga tgtctggatt aaggtttttg tttgcactga ttgctct 4787 //