ID   HE866947; SV 1; linear; genomic RNA; STD; VRL; 657 BP.
XX
AC   HE866947;
XX
DT   29-OCT-2012 (Rel. 114, Created)
DT   21-AUG-2013 (Rel. 117, Last updated, Version 2)
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DE   Apple mosaic virus CP gene for coat protein, genomic RNA, isolate HL-ZAF
XX
KW   .
XX
OS   Apple mosaic virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-657
RA   Grimova L.;
RT   ;
RL   Submitted (29-JUN-2012) to the INSDC.
RL   Czech University of Life Sciences Prague, Department of Plant Protection,
RL   Kamycka 129, Praha 6, 165 21, CZECH REPUBLIC.
XX
RN   [2]
RX   DOI; 10.1007/s11262-013-0925-z.
RX   PUBMED; 23740269.
RA   Grimova L., Winkowska L., Rysanek P., Svoboda P., Petrzik K.;
RT   "Reflects the coat protein variability of apple mosaic virus host
RT   preference?";
RL   Virus Genes 47(1):119-125(2013).
XX
DR   MD5; 347a4acc036c2e876ddc5a35dc78711d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..657
FT                   /organism="Apple mosaic virus"
FT                   /segment="3"
FT                   /host="Humulus lupulus"
FT                   /isolate="HL-ZAF"
FT                   /mol_type="genomic RNA"
FT                   /country="South Africa"
FT                   /PCR_primers="fwd_name: 87E5, fwd_seq:
FT                   ggccattagcgacgattagtc, rev_name: 87E6, rev_seq:
FT                   atgctttagtttcctctcgg"
FT                   /db_xref="taxon:12319"
FT   CDS             1..657
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:K4QDF7"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="UniProtKB/TrEMBL:K4QDF7"
FT                   /protein_id="CCI88184.1"
FT                   /translation="MVCKYCGHTHPGSCVNCKWCHGTNRPAPPKRAVIRAQANPNKGKN
FT                   PVKGGPSVRRAAWEVRGPNVEPKIPKGHRALSSREVTATVEGKLVNIDFADVFRNLLEK
FT                   DLKVYTFIIRVNSLSSNGWIGLVEDYDESNPKGPNPMDRKGFKKDQPRGWQWEAPPNTT
FT                   LDDFVKKFRLVLEFKTNFAAGAKVFMRDLYVITSELPPVQIPMNVLLIDEDLLEL"
XX
SQ   Sequence 657 BP; 179 A; 133 C; 185 G; 160 T; 0 other;
     atggtctgca agtactgtgg tcacactcac cctggatctt gcgttaattg caagtggtgt        60
     cacggaacga atagacctgc tcctccgaag cgcgctgtca ttcgcgccca agcgaacccg       120
     aataagggta agaaccccgt gaagggaggt ccatccgtga ggagggcagc ttgggaggtt       180
     agaggcccga acgtggaacc caagattcca aagggtcaca gggctctgag cagtcgtgaa       240
     gtgactgcta cggttgaagg caagcttgtg aatatcgact ttgccgatgt cttccgtaat       300
     ctgctagaaa aggatttgaa ggtgtatacc ttcataatcc gagtaaacag tctatcctct       360
     aatgggtgga ttggtctagt agaggattac gatgagagta atccgaaagg tccgaatccg       420
     atggaccgaa agggcttcaa aaaggaccaa ccgagaggtt ggcagtggga agctcctcca       480
     aacacaactc ttgatgactt cgtgaagaag tttagattgg ttttggagtt taagacgaat       540
     ttcgccgctg gtgcgaaagt ctttatgagg gatttgtacg tgataacgag tgagttacca       600
     ccggtgcaaa taccgatgaa tgttctactt atcgatgaag atttgttaga actgtag          657
//