ID HE818458; SV 1; linear; genomic RNA; STD; VRL; 6396 BP. XX AC HE818458; XX DT 21-MAY-2012 (Rel. 112, Created) DT 21-MAY-2012 (Rel. 112, Last updated, Version 1) XX DE Tobacco mosaic virus isolate Yongren-2, complete genome XX KW complete genome. XX OS Tobacco mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6396 RA Yang J.; RT ; RL Submitted (13-MAY-2012) to the INSDC. RL Yang J., Tobacco Research Institute of Chinese Academy of Agriculture, RL Tobacco disease protection, 11# Keyuan 4 Road, Laoshan Distinc, Qingdao RL 266101, Shandong Province, CHINA. XX RN [2] RA Yang J., Wang F., Shen L., Qian Y.; RT "The population variation of tobacco mosaic virus in tobacco of China"; RL Unpublished. XX DR MD5; 77ff600679765460cff8547286922809. XX FH Key Location/Qualifiers FH FT source 1..6396 FT /organism="Tobacco mosaic virus" FT /host="Nicotiana tabacum" FT /isolate="Yongren-2" FT /mol_type="genomic RNA" FT /country="China:Yunnan Province" FT /db_xref="taxon:12242" FT CDS 69..3419 FT /gene="relicase" FT /product="replication protein" FT /db_xref="GOA:I2HB22" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:I2HB22" FT /protein_id="CCH64144.1" FT /translation="MAYTQTATTSALLDTVRGNNSLVNDLAKRRLYDTAVEEFNARDRR FT PKVNFSKVISEEQTLIATRAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQIPYGSL FT TYDIGGNFASHLFKGRACVHCCMPNLDVRDIMRHEGQKDSIELYLSRLEREGKTVPNFQ FT KEAFDRYAEIPEDAVCHNTFQTCEHQPMQQSGRVYAIALHSIYDIPADEFGAALLRKNV FT HTCYAAFHFSENLLLEDSYVNLDEINACFSRDGDKLTFSFASESTLNYCHSYSNILKYV FT CKTYFPASNREVYMKEFLVTRVNTWFCKFSRIDTFLLYKGVAHKSVDSEQFYTAMEDAW FT HYKKTLAMCNSERILLEDSSSVNYWFPKMRDMVIVPLFDISLETSKRTRKEVLVSKDFV FT FTVLNHIRTYQAKALTYANVLSFVESIRSRVIINGVTARSEWDVDKSLLQSLSMTFYLH FT TKLAVLKDDLLISKFSLGSKTVCQHVWDEISLAFGNAFPSVKERLLNRKLIRVAGDALE FT IRVPDLYVTFHDRLVTEYKASVDMPALDIRKKMEETEVMYNALSELSVLRESDKFDVDV FT FSQMCQSLEVDPMTAAKVIVAVMSNESGLTLTFERPTEANVALALQDQEKASEGALVVT FT SREVEEPSMKGSMARGELQLAGLAGDHPESSYSRNEEIESLEQFHMATADSLIRKQMSS FT IVYTGPIKVQQMKNFIDSLVASLSAAVSNLVKILKDTAAIDLETRQKFGVLDVASRKWL FT IKPTAKSHAWGVVETHARKYHVALLEYDEQGVVTCDDWRRVAVSSESVVYSDMAKLRTL FT RRLLKNGEPHVSSAKVVLVDGVPGCGKTKEILSRVNFDEDLILVPGKQAAEMIRRRANS FT SGIIVATKDNVKTVDSFMMNFGKSTRCQFKRLFIDEGLMLHTGCVNFLVAMSLCEIAYV FT YGDTQQIPYINRVSGFPYPAHFAKLEVDEVETRRTTLRCPADVTHYLNRRYEGFVMSTS FT SVKKSVSQEMVGGAAVINPISKPLHGKILTFTQSDKEALLSRGYSDVHTVHEVQGETYS FT DVSLVRLTPTPVSIIAGDSPHVLVALSRHTCSLKYYTVVMDPLVSIIRDLEKLSSYLLD FT MYKVDAGTQ" FT CDS 4904..5710 FT /gene="mp" FT /product="movement protein" FT /db_xref="GOA:I2HB23" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:I2HB23" FT /protein_id="CCH64145.1" FT /translation="MALVVKGKVNINEFIDLTKMEKILPSMFTPVKSVMCSKVDKIMVH FT ENESLSEVNLLKGVKLIDSGYVCLAGLVVTGEWNLPDNCRGGVSVCLVDKRMERADEAT FT LGSYYTAAAKKRFQFKVVPNYAITTQDAMKNVWQVLVNIRNVKMSAGFCPLSLEFVSVC FT IVYRNNIKLGLREKITNVRDGGPMELTEEVVDEFMEDVPMSIRLAKFRSRTGKKSDVRK FT GKISSGDRSVPNKNYRNVKDFGGMSFKKNNLIDDDSETTVAESDSF" FT CDS 5713..6192 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:I2HB00" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:I2HB00" FT /protein_id="CCH64146.1" FT /translation="MSYSITTPSQFVYLSSAWADPIELINLCTNALGNQFQTQQARTVV FT QRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPT FT TAETLDATRRVDDATVAIRSAINNLVVELIRGTGSYNRSSFESSSGLVWTSGPAT" XX SQ Sequence 6396 BP; 1862 A; 1214 C; 1540 G; 1780 T; 0 other; gtatttttac aacaattacc aacaacaaca aacaacaaac aacattacaa ttactattta 60 caattacaat ggcatacaca cagacagcta ccacatcagc tttgctggac actgtccgag 120 gaaataactc cttggtcaat gatctagcaa agcgtcgtct ttacgacaca gcggtcgaag 180 agtttaacgc tcgtgaccgc aggcccaaag tgaacttttc aaaagtaata agcgaggagc 240 agacgcttat tgctacccgg gcatatccag aattccaaat tacattttac aacacgcaaa 300 atgccgtgca ttcgcttgca ggtggattgc gatctttaga actggaatat ctgatgatgc 360 aaattcccta cggatcattg acttatgaca taggcgggaa ttttgcatcg catctgttca 420 agggacgagc atgcgtacac tgctgcatgc ccaacctgga cgttcgagac atcatgcggc 480 atgaaggcca gaaagacagt attgaactat acctttctag gctagagaga gaggggaaaa 540 cagtccctaa cttccaaaag gaagcatttg acagatacgc agaaattcct gaggacgctg 600 tctgtcataa tactttccag acatgtgaac atcagccgat gcagcaatca ggcagagtgt 660 acgccattgc gctacacagc atatatgaca tacccgctga tgagttcggg gcggcactct 720 tgaggaaaaa cgtccatacg tgctatgccg ctttccactt ctctgagaac ctgcttcttg 780 aggattcata cgtcaatttg gacgaaatca acgcgtgttt ttcgcgcgat ggagacaaat 840 tgaccttttc ttttgcatca gagagtactc ttaattactg tcatagttat tctaatattc 900 ttaagtatgt gtgcaaaact tacttccctg cctctaatag agaggtttac atgaaggagt 960 ttttagtcac cagggttaac acctggtttt gtaagttttc tagaatagat acttttcttt 1020 tgtacaaagg tgtggcccat aaaagtgtag atagtgagca gttttatact gcaatggaag 1080 acgcatggca ttacaaaaag actcttgcaa tgtgcaacag tgagagaatt ctccttgagg 1140 attcatcatc agttaattac tggtttccca aaatgaggga tatggtcatc gtaccattat 1200 tcgacatttc tttggagact agtaagagga cgcgcaagga agtcttagtg tccaaggatt 1260 tcgtgtttac agtgctcaac cacattcgaa cataccaggc gaaagctctt acatacgcaa 1320 atgttctgtc cttcgtcgaa tcgattcgat cgagggtaat cattaacggt gtaacagcga 1380 ggtccgaatg ggatgtggac aaatctttgt tgcaatcctt gtccatgacg ttttacctgc 1440 atactaagct tgccgttcta aaggatgact tactgattag caagtttagt ctcggttcaa 1500 aaacggtgtg tcagcatgtg tgggatgaga tttcgctggc ttttgggaac gcatttccct 1560 ccgtaaaaga gaggctcttg aacaggaaac ttatcagagt ggcaggtgac gcattagaga 1620 tcagggtgcc tgatctatat gtgactttcc acgacagatt agtgactgag tacaaggcct 1680 ctgtggacat gcctgcgctt gacattagga agaagatgga agaaacggaa gtgatgtaca 1740 atgctctttc ggagttatcg gtgttaaggg agtctgacaa attcgatgtt gatgtttttt 1800 cccagatgtg ccaatctttg gaagttgacc caatgacagc agcgaaggtt atagtcgcgg 1860 tcatgagcaa tgagagcggt ctgactctca catttgaacg acctacagag gcgaatgttg 1920 cgctagcttt gcaagatcaa gagaaggctt cagaaggtgc tttggtagtt acctcgaggg 1980 aagttgaaga accgtccatg aagggttcga tggccagagg agagttacaa ttagctggtc 2040 ttgctggaga tcatccggag tcgtcttatt ctaggaacga ggagatagag tctttagagc 2100 agtttcatat ggcaacggca gattcgttaa ttcgtaagca gatgagctcg attgtgtaca 2160 caggtccgat taaagttcag caaatgaaaa actttatcga tagcctggta gcatcactat 2220 ctgctgcggt gtcgaatctc gtcaagatcc tcaaagatac agctgctatt gaccttgaaa 2280 cccgtcaaaa gtttggagtc ttggatgttg catctaggaa gtggttgatc aaaccaacgg 2340 ccaagagtca tgcatggggt gttgtcgaaa cccacgcgag gaagtatcat gtggcgcttt 2400 tggaatatga tgagcagggt gtggtaacat gcgatgattg gagaagagta gctgtcagct 2460 ctgagtctgt tgtttattcc gatatggcga aactcagaac tctgcgccga ctgcttaaaa 2520 acggtgaacc gcacgtcagt agcgcaaagg ttgttcttgt ggacggagtt ccgggctgtg 2580 gaaaaaccaa agaaattctt tccagggtta attttgatga agatctaatt ctagtacctg 2640 ggaagcaagc tgcggaaatg atcagaagac gtgcgaattc ctcagggatt attgtggcca 2700 cgaaggacaa cgttaaaacc gttgattctt tcatgatgaa ttttggaaaa agcacacgct 2760 gtcagttcaa aagattattc attgatgaag ggttgatgtt gcatactggt tgtgttaatt 2820 ttcttgtggc gatgtcattg tgcgaaattg catatgttta cggagacaca cagcagattc 2880 catacatcaa tagagtttca ggattcccgt accccgccca ttttgccaaa ttggaagttg 2940 acgaggttga gacacgcaga actactctcc gttgtccagc tgatgtcaca cattatctga 3000 acaggagata tgagggcttt gtcatgagta cttcttcggt taaaaagtct gtttcgcagg 3060 agatggttgg cggagccgct gtgatcaatc cgatctcaaa acccctgcat ggcaagatct 3120 tgacgtttac ccaatcggat aaagaagctc tgctttcaag agggtattca gatgttcaca 3180 ctgtgcatga agtgcaaggc gagacatact ctgatgtttc actagttagg ttaaccccta 3240 caccagtctc catcattgca ggagacagcc cacatgtttt ggttgcattg tcgaggcaca 3300 cctgttcgct caagtactac actgttgtta tggatccttt agttagtatt attagagatc 3360 tagagaaact tagctcgtac ttgttagata tgtataaggt cgatgcagga acacaatagc 3420 aattacagat tgactcggtg ttcaaaggtt ccaatctttt tgtggcagcg ccaaagactg 3480 gtgatatttc tgatatgcag ttttactatg ataagtgtct cccaggtaac agcaccatga 3540 tgaataattt tgatgctgtt accatgaggt tgactgacat ttcattgaat gtcaaagatt 3600 gcatattgga tatgtccaaa tctgttgctg cgcctaagga tcagatcaaa ccactaatac 3660 ctatggtacg aacggcggca gaaatgccac gccagactgg actattggaa aatttagtgg 3720 cgatgattaa aaggaacttt aacgcacccg agttgtctgg catcattgat attgaaaaca 3780 ctgcatcttt agttgtagat aagtttttcg atagttattt gcttaaggaa aaaagaaaac 3840 caaataaaaa tgtttctttg tttagtagag agtctctcaa tagatggtta gaaaagcaag 3900 aacaggtaac aataggccag ctcgcagatt ttgattttgt ggatttgcca gcagttgatc 3960 agtatagaca catgatcaaa gcacaaccca agcaaaaatt ggacacttca atccaaacgg 4020 agtacccggc tttgcagacg attgtgtacc attcaaaaaa gatcaatgca atatttggcc 4080 cgttgtttag tgagcttact aggcaattac tggacagtgt tgattcgagc agatttttgt 4140 ttttcacaag aaagacacca gcgcagattg aggatttctt cggagatctc gacagtcatg 4200 tgccgatgga tgtcttggag ctggatatat caaaatacga caaatctcag aatgaattcc 4260 actgtgcagt agaatatgag atctggcgaa gattgggttt tgaagatttc ttgggagaag 4320 tttggaagca agggcataga aagaccaccc tcaaggatta taccgcaggt atcaaaactt 4380 gcatctggta tcaaagaaag agcggggacg tcacgacgtt cattggtaac actgtgatca 4440 ttgctgcatg tttggcctcg atgcttccga tggagaaaat aatcaaagga gccttttgtg 4500 gtgacgatag tctgctgtac ttcccaaagg gttgtgagtt tccggatgtg caacactccg 4560 cgaatcttat gtggaatttt ggagcaaaac tgtttaaaaa acagtatgga tacttttgcg 4620 gaaggtatgt aatacatcac gacagaggat gcattgtgta ttacgatccc ctaaagttga 4680 tctcaaaact tggtgctaaa acacatcaag gattgggaac acttggagga gttcagaagg 4740 tctctttgtg atgttgctgt ttcgttgaac aattgtgcgt attacacaca gttggacgac 4800 gctgtatggg aggttcataa gaccgcccct ccaggttcgt ttgtttataa aagtctggtg 4860 aagtatttgt ctgataaagt tctttttaga agtttgttta tagatggctc tagttgttaa 4920 aggaaaagtg aatatcaatg agtttatcga cctgacaaaa atggagaaga tcttaccgtc 4980 gatgtttacc cctgtaaaga gtgtcatgtg ttccaaagtt gataaaataa tggttcatga 5040 gaatgagtca ttgtcagagg taaaccttct taaaggagtt aagcttattg atagtggata 5100 cgtctgttta gccggtttgg tcgtcacggg cgagtggaac ttgcctgaca attgcagagg 5160 aggtgtgagc gtgtgtctgg tggacaaaag gatggaaaga gccgacgagg ccactctcgg 5220 atcttactac acagcagctg caaagaaaag atttcagttc aaggtcgttc ccaattatgc 5280 tataaccacc caggacgcga tgaaaaacgt ctggcaagtt ttagtcaata ttagaaatgt 5340 aaagatgtca gcgggtttct gtccgctttc tctggagttt gtgtcggtgt gtatcgttta 5400 tagaaataat ataaagttag gtttgagaga gaaaattaca aacgtgagag atggagggcc 5460 catggaactt acagaagaag ttgttgatga gttcatggaa gatgtcccta tgtcaatcag 5520 gcttgcaaag tttcgatctc gaaccggaaa aaagagtgat gtccgtaaag ggaaaattag 5580 tagtggtgat cggtcagtgc cgaacaagaa ctatagaaat gttaaggatt ttggaggaat 5640 gagttttaaa aagaataatt taatcgatga tgattcggag actactgtcg ccgaatcgga 5700 ttcgttttaa atatgtctta cagtatcact actccatctc agttcgtgta cttgtcatca 5760 gcgtgggccg acccaataga attaattaat ttatgtacta atgccttagg aaatcagttc 5820 caaacacaac aagctcgaac tgtcgttcaa agacaattca gtgaggtgtg gaaaccttca 5880 ccacaagtaa ctgttagatt ccctgacagt gactttaagg tgtataggta caatgcggta 5940 ttagacccgc tagtcacagc actgttaggt gcatttgaca ctagaaatag aataatagaa 6000 gttgaaaatc aggcgaaccc cacgactgcc gaaacgttag acgctactcg tagagtagac 6060 gacgcgacgg tggccataag gagcgctata aataatttag tagtagaatt gatcagagga 6120 actggatctt ataatcgtag ctctttcgag agctcttctg gtttggtttg gacctctggt 6180 cctgcaactt gaggtagtca agatgcataa taaataacgg attgtgtccg taatcacacg 6240 tggtgcgtac gataacgcat agtgtttttc cctccactta aatcgaaggg ttgtgtcttg 6300 gatcgcgcgg gtcaaatgta tatggttcat atacatccgc aggcacgtaa taaagcgagg 6360 ggttcgaatc cccccgttac cgccggtagg ggccca 6396 //