ID HE814062; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC HE814062; XX DT 08-JUL-2012 (Rel. 113, Created) DT 08-JUL-2012 (Rel. 113, Last updated, Version 1) XX DE African cassava mosaic virus segment DNA-A, isolate Central African DE Republic-Bambari-CF35-2007 complete sequence XX KW complete viral segment. XX OS African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Lett J.M.; RT ; RL Submitted (07-MAY-2012) to the INSDC. RL Lett J.M., Pole de Protection des Plantes, CIRAD-BIOS-UMR PVBMT, 7 Chemin RL de l'IRAT, 97410 Saint Pierre / Ile de La Reunion, FRANCE. XX RN [2] RA Zinga I., Harimalala M., De Bruyn A., Hoareau M., Mandakombo N., RA Semballa S., Reynaud B., Lefeuvre P., Lett J.M.; RT "East African cassava mosaic virus-Uganda (EACMV-UG) and African cassava RT mosaic virus (ACMV) reported for the first time in Central African Republic RT and Chad"; RL Unpublished. XX DR MD5; 247d749405ce94c6c36c527b5a712e3d. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="African cassava mosaic virus" FT /segment="DNA-A" FT /isolate="Central African Republic-Bambari-CF35-2007" FT /mol_type="genomic DNA" FT /country="Central African Republic:Center" FT /lat_lon="5.83 N 20.8 E" FT /isolation_source="Manihot esculenta" FT /collection_date="Aug-2007" FT /db_xref="taxon:10817" FT CDS 136..477 FT /gene="AV2 protein" FT /product="AV2" FT /db_xref="GOA:I7II50" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:I7II50" FT /protein_id="CCH63359.1" FT /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPNTLGHDLVRDL FT VSVIRARNYVEATRRYHHFHSRLQGSSKTELRQPIQEPCYCPHCPRHKSKTGLDEQAHV FT QKAHDVQDV" FT CDS 296..1072 FT /gene="AV1" FT /product="coat protein (CP)" FT /db_xref="GOA:I7KLH2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:I7KLH2" FT /protein_id="CCH63360.1" FT /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRVTAPTVHVTNRKRAW FT MNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVVSDVTRGPGLTH FT RVGKRFCIKSIYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNTPQDFGQIFNMFDN FT EPSTATIKNDLRDRFQVLRKFHATVIVGPSGMKEQALVKRFYRLNHHVTYNHQEAGKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN" FT CDS complement(1069..1473) FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:I7JVM8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:I7JVM8" FT /protein_id="CCH63361.1" FT /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHQQRPFLLNQDI FT ITVQVRFNHNLRKELGIHKCFLNFKIWTTLQPQTGLFLRVFRYQVIKYLDNMGVISINN FT VIRAADHVLFNVIANTIECQLTHEIKFNVY" FT CDS complement(1214..1621) FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:I7JBV8" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:I7JBV8" FT /protein_id="CCH63362.1" FT /translation="MQSSSPSQHHSTQVPIKVSHRQFKKRAIRRRRVDLVCGCSYYLHI FT DCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNHQAPTTTIPAEPGHHNSPGSVQSQ FT PQEGAGDSQMFSQLQNLDDLTASDWSFLKGL" FT CDS complement(1530..2606) FT /gene="AC1" FT /product="replication associated protein (Rep)" FT /db_xref="GOA:I7KID2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I7KID2" FT /protein_id="CCH63363.1" FT /translation="MRTPRFRIQAKNVFLTYPKCSIPKEHLLSFIQTLSLPSNPKFIKI FT CRELHQNGEPHLHALIQFEGKITITNNRLFDCVHPSCSTNFHPNIQGAKSSSDVKSYLD FT KDGDTVEWGLFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELVPKDFVLQFHN FT LNSNLDRIFQEPPAPYVSPFPCSSFDQVPDELEEWVADNVRDSAARPWRPNSIVIEGDS FT RTGKTIWARSLGPHNYLCGHLDLSPKVFNNAAWYNVIDDVDPHYLKHFKEFMGSQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEERQAALKAWALKNAIFITLTAPLY FT SGSNQSQSQTIQEASHST" FT CDS complement(2150..2572) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:I7II51" FT /protein_id="CCH63364.1" FT /translation="MSFSHTQSVLYPKNTYCHSFKHSLSHPTLSSLKSVESCIRMGNLT FT CMPSSNSRVKSRLRTIVSSIVYTQAVAPISTPTFKVPNQAQMSSPIWIRTETPLNGDYF FT RSMDDLLEAVNNPRMMLTPKRLTAAVSQKLLMSLGN" XX SQ Sequence 2781 BP; 750 A; 564 C; 686 G; 781 T; 0 other; accggttggc cccgcccccc tttaaacgtg gtccccgcgc actacgtatg tcggccaatc 60 atgttatatc tttaaaggtt atgtattagt ggtgggccac tatatacttg caggcgaagt 120 tgtggctagt gcgcaatgtg ggatccactg gtgaatgagt ttccagactc ggtgcatggg 180 cttaggtgta tgcttgcaat taaatatttg caggccctag aggatacata cgagcccaat 240 actttgggcc acgatctggt tagggatcta gtctcagtta tcagggctcg taattatgtc 300 gaagcgacca ggagatatca tcatttccac tccaggctcc aaggttcgtc gaagactgaa 360 cttcgacagc ccatacagga accgtgttac tgcccccact gtccacgtca caaatcgaaa 420 acgggcctgg atgaacaggc ccatgtacag aaagcccatg atgtacagga tgtatagaag 480 cccagacata cctaggggct gtgaaggccc atgtaaggtc caatcgtttg agcaaaggga 540 tgatgtgaag caccttggca tctgtaaggt ggtcagtgat gtgactcgcg ggcctgggct 600 gacacacagg gtcggaaaga ggttttgtat caagtccatc tacatccttg gtaagatctg 660 gatggatgaa aatattaaga agcagaatca cactaataat gtgatgtttt acctgcttag 720 ggatagaagg ccttatggca atacgcccca agactttggg cagatattta acatgtttga 780 taacgagccc agtacggcaa ccatcaagaa tgatttgagg gatagatttc aggtgttgag 840 gaaatttcat gccacggtta ttgttggtcc atctggcatg aaggagcagg cgttggtgaa 900 aaggttttac aggttgaatc atcacgtgac atataatcat caggaggcag ggaagtatga 960 gaatcacaca gagaatgctt tgcttttgta catggcatgt acccatgcct ccaatcctgt 1020 atatgctacg ttgaaaatac gtatatactt ctatgacagt attggcaatt aataaacatt 1080 gaattttatt tcatgagtca actgacactc aatagtgttg gcaattacat tgaacaaaac 1140 atgatcagca gctctaatta cattgttaat tgagataaca cccatattat ccaagtattt 1200 aattacttgg tatctaaaga cccttaagaa aagaccagtc tgaggctgta aggtcgtcca 1260 gattttgaag ttgagaaaac atttgtgaat ccccagctcc ttcctgaggt tgtgattgaa 1320 ccgaacctgg actgttatga tgtcctggtt cagcaggaat ggtcgttgtt ggtgcctggt 1380 gattgtgaaa tacaggggat tgtttatttc ccaggtatac acgccattca ttgcttgagg 1440 agcagtgatg agttcccctg tgcgtaaatc catgattgga gcagtcgata tggaggtaat 1500 aggaacagcc acagacaaga tccactctcc tacgtcgaat ggctcgcttc ttgaattgtc 1560 tgtgactgac tttgattgga acctgagtag agtggtgctg tgagggtgat gaagattgca 1620 ttctttaatg cccaggcctt tagcgctgct tgcctttcct cgtctaggaa ctctttatat 1680 gacgaggtag gacctggatt gcagaggaag atagtgggaa ttccaccttt aatttgaacg 1740 ggtttcccgt atttcgtgtt ggactgccag tccctctggg accccatgaa ttccttaaag 1800 tgctttaggt agtggggatc gacgtcatca atgacgttgt accatgcagc attattgaag 1860 acctttggac taaggtccag gtgtccacac aggtaattgt gtgggcctaa agatctggcc 1920 catatcgtct tccctgttct gctatcacct tcgatgacaa tgctattggg tctccatggc 1980 cgcgcagcgg aatccctaac attatcagcg acccattctt caagttcatc aggaacttgg 2040 tcaaaggaag aacatgggaa gggagaaaca taaggagctg gtggctcctg gaaaatccga 2100 tctaaattac tatttagatt atgaaattga agtacaaagt cctttgggac taattcccta 2160 atgacattaa gagcttctga cttactgccg ctgttaagcg ctttggcgta agcatcattc 2220 gcggattgtt gaccgcctct agcagatcgt ccatcgatct gaaatagtcc ccattcaacg 2280 gtgtctccgt ccttatccag ataggacttg acatctgagc ttgatttggc accttgaatg 2340 ttggggtgga aattggtgct acagcttggg tgtacacaat cgaagagacg attgttcgta 2400 atcgtgattt taccctcgaa ttggatgagg gcatgcaagt gaggttcccc attctgatgc 2460 agctctctac agattttaat gaacttaggg ttggatggga gagagagtgt ttgaatgaat 2520 gacagtaggt gttctttggg tatagaacac tttgggtatg tgagaaagac attcttggct 2580 tgaattctaa aacgaggagt tctcatgttg accaagtcaa ttggagacac tcaactagag 2640 acactcttga gcatctcctc ccattaattg gagacattat ataggtgtct ccaaatggca 2700 ttcttgtaat aaggtgaact ttaatttgaa ttaaaaggct caagaggcgc ggaacaccca 2760 aggggccaac cgtataatat t 2781 //