ID HE617300; SV 1; circular; genomic DNA; STD; VRL; 2741 BP. XX AC HE617300; XX DT 11-MAR-2012 (Rel. 112, Created) DT 11-MAR-2012 (Rel. 112, Last updated, Version 1) XX DE Cassava mosaic Madagascar virus segment DNA-B complete sequence, isolate DE MG:Tol:06 XX KW . XX OS Cassava mosaic Madagascar virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2741 RA Harimalala M.A.; RT ; RL Submitted (09-DEC-2011) to the INSDC. RL Harimalala M.A., UMR PVBMT, CIRAD, 97410, 97410, REUNION. XX RN [2] RA Harimalala M.A., Lefeuvre P., Hoareau M., Villemot J., Tiendrebeogo F., RA Ranomenjanahary S., Andrianjaka A., Reynaud B., Lett J.M.; RT "A novel cassava-infecting begomovirus from Madagascar: Cassava mosaic RT Madagascar virus"; RL Unpublished. XX DR MD5; 4eac1d5ee897c5199b54170cd3ad3096. XX FH Key Location/Qualifiers FH FT source 1..2741 FT /organism="Cassava mosaic Madagascar virus" FT /segment="DNA-B" FT /host="Manihot esculenta" FT /isolate="MG:Tol:06" FT /mol_type="genomic DNA" FT /country="Madagascar:Toliary" FT /collected_by="Sahondramalala Ranomenjanahary" FT /collection_date="2006" FT /db_xref="taxon:1125764" FT CDS 359..1135 FT /transl_table=1 FT /gene="BV1" FT /product="nuclear shuttle protein (NSP)" FT /db_xref="GOA:H8WR52" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:H8WR52" FT /protein_id="CCF12092.1" FT /translation="MYSVNRRGYKTPYRSPYVARVTPYVYRKTSFKHTSKSRVPRKLAY FT ESPKVLYMRRSMEDVHDGASLKLPQQGDHTSYVTLPCRGIDGNGGRSVDHIKLLSLRVS FT GTVNVSQFGGDDNMGEKTTMIGIFFMACLVDKKPFVPEGVSTLPTFKELFGEYESVYGM FT PRLKENVRHRYRVIGTSKLYITTDEDHIQKPFSIRRRLSGGKYPIWSSFKDVDNSSTGG FT NYKNVNKNAILVSYVWVSLCRSTCDVYSQFVLNYVG" FT CDS complement(1264..>2298) FT /codon_start=1 FT /transl_table=1 FT /gene="BC1" FT /product="movement protein (MP)" FT /db_xref="GOA:H8WR53" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:H8WR53" FT /protein_id="CCF12093.1" FT /translation="MFMLLHVCSYDLTNLIIITAFYVYILTYNVICHKPHRMEATYTVD FT NNRYIDTKRTEYALTNDASPIYLQFPSSFEQATMRLKGRCMKIDHIIIEYNNQVPFNAT FT GSVIVEIRDNRVSLEDAAQAAFTFPITCNVDLHYYSSTYFSVSEPSPWEIIYKVEDSNV FT VEGVKFASIKARLRLSTAKHSTDIRFKPPTINIRSKGFTKECIDFWSVERGETRRRLLN FT PNPSAQTHRTISTRPITIMPGETWATKSQIGLPSSSNPARLEHFRSQSMRMDPSTTPTD FT LDNESTEYPYQRLHRLNTPELDPGDSVSQAPSDSVSRKDLETLLESTINKCLIKIKSEA FT PRQL" XX SQ Sequence 2741 BP; 722 A; 481 C; 699 G; 839 T; 0 other; accggatggc cgcgcccgaa aaagcatgtg gaccccacaa tagcccccac gcactaagga 60 aagcagccaa tcaggtttta tacgtgaaga ctcgttagta actcatggat gagtaagtgg 120 tccctaccca ctaattctga caggcaattg tattgctatt tgtgtattat attattatag 180 gtgtgctacg ggccaatcta aagttatgtt atggggccta tcataaaaaa gcaaaatata 240 ggtacctatt cacatattga ttatatggtt atgtgcggat atatgatccg ccacgtgttt 300 acaaaggata tggattgtcc tataaatatt ttgcatatct cgccttcgtt catgcaagat 360 gtattctgtt aacagacgtg ggtataagac tccgtatagg agtccgtatg tcgctcgtgt 420 aacaccatat gtttatcgta agacgtcgtt taaacatacg tctaaatctc gtgtacctcg 480 aaagttggcg tatgaatcgc caaaagtgtt atatatgcga cgctcaatgg aagatgtcca 540 tgatggggct tctttgaagt tgcctcaaca gggggatcat acgtcctacg tgacactccc 600 gtgtcgtggt atcgatggta atgggggtag gtctgtggac catataaaat tattaagctt 660 gagggtttct gggaccgtca atgtcagtca attcggtggt gatgacaata tgggagagaa 720 aacaaccatg ataggtatct ttttcatggc ttgtcttgtt gataagaaac ctttcgttcc 780 agagggggtc agcacattgc cgacgttcaa ggagttgttc ggggaatatg aatccgtgta 840 tggcatgcct aggttgaagg aaaacgtccg tcaccgttat cgcgttattg ggacgtcgaa 900 attatatata acgaccgatg aagatcacat ccagaagcct tttagtatac gtcgaagact 960 cagtggaggg aaatatccta tttggtcttc gttcaaggat gtggataata gtagtacagg 1020 tggtaactat aaaaatgtaa ataagaacgc tatactagtt agttatgtgt gggtatcgct 1080 atgtcggagc acctgtgatg tgtattctca gtttgtactt aattacgtcg gctgataata 1140 aaattatata agggttttga cattaattat gattgaacta atgaaacatg cgatgaacat 1200 caatgggaag catatagagt tttattatgt tccgaatcaa atattgtaca tatcaattgt 1260 ttattacaat tgccgtgggg cttcggattt gattttgatg agacacttgt ttatggtact 1320 ctccagcagg gtctcgaggt cctttctgga tactgagtcg gatggggcct gtgatactga 1380 gtctcctggg tctaactctg gtgtgtttaa tctgtgtagt ctctggtaag gatattctgt 1440 ggactcgttg tctaagtctg ttggtgttgt cgatgggtcc attctcatgg actgtgaacg 1500 aaagtgttcc agccgtgctg ggtttgatga gctgggtagc ccaatctgag actttgtggc 1560 ccatgtttct ccaggcatta tggtaatggg cctagtggat attgttctgt gggtctgagc 1620 agatggattt ggattgagga gacgccgtct ggtttctcca cgttccacgg accaaaagtc 1680 tatgcattct tttgtgaatc ccttggatcg tatgttgatc gtagggggct tgaatcgtat 1740 gtccgtggaa tgcttggcag tcgataatct tagtcttgcc ttgatggagg cgaatttgac 1800 cccttctacg acgttcgagt cctcgacttt gtatataatt tcccatggtg agggttctga 1860 cactgagaag taagtggagg agtagtaatg gagatcgacg ttacacgtta tcgggaatgt 1920 gaaagcagct tgtgctgcgt cttcgaggct cacgcgatta tccctgatct ccacaattac 1980 tgagcccgtt gcattaaatg ggacttggtt attgtattct attatgatgt gatcgatctt 2040 catgcatctg cccttaagcc gcatggtggc ctgttcgaat gaactgggaa attgaagata 2100 aatcggtgat gcgtcatttg tcagtgcata ctcggtcctt ttggtgtcga tgtatcggtt 2160 gttgtcaact gtatatgtgg cctccatcct gtgtggtttg tgacaaatga cgttataagt 2220 gagaatgtat acataaaatg cagtaataat tatgagattg gtcaaatcat atgagcatac 2280 atgcagtaac atgaacatga tggtaagaaa acatcaagta tttataatag gccgcgcagc 2340 gggatggctt tgatgatata ccgttaactg ggctggaata gatgctacgc accgcgatat 2400 aatcctttat acgtgatgta gatgtcaggg acgatagaag gaggatattg aactggcgtg 2460 taacgatggt aagtagatgt tggttttata gcggatgaag caactgctgt gcgagacgat 2520 gtcgtgtaaa taagccacgg agcttgctat tggtagagag agaaactaga gagaagcgag 2580 agcaattgga gacacctcgg ttgaagtctc ttatgtattg gagacaatat atagtgtctc 2640 caaatggcat tgtcgtaatt agtgacaggt cctttacgcg tcatgtggtc cctactgcga 2700 atttaaagtc gaaaaagtat tgcggccatc cgtctaatat t 2741 //