ID HE574163; SV 1; linear; genomic RNA; STD; VRL; 2977 BP. XX AC HE574163; XX DT 18-JUL-2011 (Rel. 109, Created) DT 18-JUL-2011 (Rel. 109, Last updated, Version 1) XX DE Apple mosaic virus Pol gene for polymerase, segment 2, isolate Apple XX KW complete viral segment. XX OS Apple mosaic virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-2977 RA Lakshmi V.; RT ; RL Submitted (12-JUL-2011) to the INSDC. RL Lakshmi V., Technology (CSIR), Plant Virology, Institute of Himalayan RL Bioresource, PO Box no-6, Himachal Pradesh-176061, INDIA. XX RN [2] RA Lakshmi V., Hallan V., Verma R.R., Zaidi A.A.; RT "RNA 2 of Apple mosaic virus from Indian apple isolates"; RL Unpublished. XX DR MD5; 7fa0c4ffdbb4ea84314a1d6c914f34dd. XX FH Key Location/Qualifiers FH FT source 1..2977 FT /organism="Apple mosaic virus" FT /segment="2" FT /host="Malus x domestica cv. Golden Delicious" FT /isolate="Apple" FT /mol_type="genomic RNA" FT /country="India:Himachal Pradesh" FT /isolation_source="leaves" FT /collected_by="Vijay Lakshmi" FT /collection_date="25-Sep-2010" FT /identified_by="Vijay Lakshmi" FT /db_xref="taxon:12319" FT 5'UTR 1..79 FT CDS 80..2710 FT /gene="Pol" FT /product="polymerase" FT /db_xref="GOA:G0UDV2" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:G0UDV2" FT /protein_id="CCC54906.1" FT /translation="MDPLFSVFRNVDFSVKKMFTFDHEGDLVEPLLQLKHRTLTGVSKT FT DEYAKLKQEYDECVTEEARQEALAVLNEYTRNHHDRVIGFTNLFIGMALVKFLGPKMQR FT VFTQFIGTEMGPLLQTRWGGLFDLELESDYFIEVPNFDDYYVRDYEPYVEIDESVLLPE FT EIEITSTEKSSEDVTSEETVEIDLTEPAMNSDLVTIRRSFEIWADGSEFGEELPPIPSD FT FIGTVKEGDDGSRDETEDSFDINALDDERPALENPGKIVKTPLPLIPDVGRFETNQLMM FT VKEVVPHKFESILECHEKVLARNDWKSLAMYFPIGDIPTCGCIDLMAFPVKHTSPEFIQ FT MAIDEMLPGISDIDDSFFQELVETSDIALELDRATLDTSVFNDWTKSSGPKLNGLFRTG FT NMSKRIPTQREAALAIEKRNLNVPDLQQVLFEDDEARKIANRFINTVIDPNKLAQFPGY FT ISEGEMGYFNKYLSGKNIPEDAFVDPCALVSMDKYRHMIKTQLKPVEDCSQIFERPLAS FT PITYHDKGKVMSTSPILVMMCNRLLLCLTEKISIPTGNISLFSLDPFASEMTKEFKEID FT PSTFDKSQQRLHHLTHYHTPTALGAPADFIDMWFGSHEISHIRDGPCGVGFSVNYQPRT FT GDACTYLANTIITLSALAYMYDLLDPNITFVIASGDDSLIGSRVPLDRDDEFKFTTLFN FT FEAKFPHNQPFVCSKFLCLVPTTDGGKKVVAVPNALKLNIKLGVKDLSPLTFDSWYESW FT LDLIWYFDNYLIVSTMKDYLSHRYLRKPTMFQEGAMLAYGSIFANKEKCLRSVFGISSE FT ELKRMVRKLQPEKKRAPINQITMEKPIGDNLIVRKGFVEKELVDRKPRLGKKERKELEK FT RRLKT" FT 3'UTR 2711..2977 XX SQ Sequence 2977 BP; 851 A; 532 C; 755 G; 839 T; 0 other; ggttatttca cgtggttgtg aaattaatta attatctttt caactgtgat ctcacattta 60 acgaaaagtt tatgtgatca tggatccctt gttctcagtt ttccggaatg ttgacttttc 120 ggtgaagaaa atgttcacgt tcgatcatga aggagacttg gtggaaccat tgctccagtt 180 gaagcaccga acccttactg gggtttcgaa aaccgatgag tacgcgaagt tgaagcagga 240 atatgacgaa tgcgtgaccg aagaagcgcg acaagaagcg ctagcagttt tgaatgagta 300 cactcgaaat caccatgacc gagttatcgg gtttactaac ctgtttattg ggatggcatt 360 ggtgaaattc cttgggccga agatgcaaag agtgtttact caattcatag ggacagagat 420 gggaccattg ctgcagacgc gatggggagg actgttcgat ttagagcttg aatccgatta 480 tttcatcgaa gtcccgaatt ttgacgatta ctatgttcgt gattatgaac catacgtcga 540 gatagacgag tctgtgctgc taccagaaga gatcgagata acttcgactg agaagagttc 600 tgaggacgtg acgtccgagg agactgttga gatcgattta acagaaccag cgatgaatag 660 tgatctggta actattcgca gatcgtttga gatctgggct gatggatctg agttcggtga 720 ggaattgcct ccgattcctt cggactttat agggacggtg aaagaaggag acgacggctc 780 tagagatgag actgaggatt cgtttgatat caatgcgctc gatgatgagc gtcctgcttt 840 ggagaatcct ggaaagatcg tgaagacacc attgcctctt atccccgatg tgggaagatt 900 cgagacgaat caattgatga tggttaagga ggttgtgcct cacaagtttg aatcaattct 960 ggaatgtcat gaaaaggttt tagcgagaaa cgattggaag tctcttgcga tgtattttcc 1020 gataggagat attcccactt gtgggtgtat agatcttatg gcattccctg tgaagcatac 1080 aagccctgaa tttatccaaa tggcgatcga tgagatgctg ccaggaattt ctgacattga 1140 tgacagtttc tttcaagaac tggtcgaaac ttcagatatt gccttggaat tggatagggc 1200 aactttggat acatctgtat tcaacgattg gacgaaatct tcaggtccga agttgaatgg 1260 attattccga actgggaaca tgtcgaaaag aattccgacc cagcgagaag ctgctttggc 1320 gatagagaag aggaatttga atgttccaga tttacagcag gttttattcg aggatgatga 1380 ggctaggaag attgcgaatc gtttcattaa cacagttatt gatccgaata aactagcgca 1440 attccccggt tacatttcag aaggagagat gggttacttt aataagtatc tttccgggaa 1500 gaatatacca gaggatgctt ttgtggatcc atgtgctttg gtgtcgatgg acaagtatcg 1560 acatatgatc aaaactcaat tgaaaccagt tgaggattgt tcgcagatat ttgagagacc 1620 tttggcttca ccgattacat atcatgataa aggtaaagta atgtctactt cacccatttt 1680 ggtcatgatg tgtaataggc tactgctgtg tttgactgag aagatatcaa ttccgacagg 1740 aaatatctca ttattctcat tggatccctt tgcttccgag atgacgaaag agtttaaaga 1800 gatagacccc tcgacattcg ataagtcaca gcagaggttg catcacttga ctcactatca 1860 cacccccaca gctcttggcg cgcctgccga cttcattgac atgtggtttg gctcacacga 1920 gatatcgcat atcagggacg gaccctgcgg tgtcgggttt agtgtgaatt atcagcctcg 1980 aactggagac gcttgtacat acctggcaaa tacgatcatt acattatccg ctttggcata 2040 tatgtatgat cttttagatc cgaatattac tttcgtcatc gcttcaggag acgatagttt 2100 aataggatcg agagtaccat tggataggga cgacgagttt aaattcacaa ctttgttcaa 2160 ctttgaggct aaatttccac ataatcagcc ctttgtttgt agcaaatttt tgtgtctagt 2220 cccgacgact gatggtggta agaaagtggt ggctgttccg aatgcgttga agttgaacat 2280 aaaacttggt gttaaggatt tgagcccatt aactttcgat tcctggtatg aatcttggtt 2340 ggatttgatt tggtatttcg ataattatct gattgtttcg actatgaaag actatctgag 2400 tcacagatat ttgagaaaac caacaatgtt tcaagaagga gcgatgttag cttacggttc 2460 gatttttgcc aataaagaga agtgtcttag atctgtattt ggcattagtt cggaggaact 2520 caagcgaatg gtgaggaaat tgcaaccaga gaaaaagaga gctccgataa atcaaatcac 2580 catggagaaa ccaattggag acaaccttat cgtgaggaaa ggatttgtcg agaaggaatt 2640 ggtggataga aaacccagat tgggtaagaa agagcggaaa gagctcgaga aacgtcgttt 2700 gaagacgtaa aagttagaaa gagcgggagg ctcgaagttc taatttgagg agcgtggagc 2760 tcgaagttcc gagagggaac tgaagcatat cgtgaggata tgcgttgtag gggagatgga 2820 ccccaagact cgattagagt cagaccgtac caccgctagt ggatttgcgg tcagttttcc 2880 gagcgtcgcc tccttaggcg tgtcctagga aaacaacaac tcagtgtgga gttgattcca 2940 atttctgtga aagaaattga tgccccgatt aggaggc 2977 //