ID GU906292; SV 1; linear; genomic DNA; STD; VRL; 1177 BP. XX AC GU906292; XX DT 03-MAY-2010 (Rel. 104, Created) DT 05-APR-2013 (Rel. 116, Last updated, Version 4) XX DE Jatropha mosaic India virus isolate Rajasthan coat protein (AV1) gene, DE partial cds; REn protein (AC3) and transcriptional activator protein (AC2) DE genes, complete cds; and replication-associated protein (AC1) gene, partial DE cds. XX KW . XX OS Jatropha mosaic India virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-1177 RA Baghel G., Naqvi Q.A., Snehi S.K., Raj S.K.; RT "Molecular identification of three isolates of Jatropha mosaic India virus RT associated with mosaic disease of Withania somnifera in India"; RL Arch. Phytopathol. Pflanzenschutz 45(17):2114-2119(2012). XX RN [2] RP 1-1177 RA Baghel G., Naqvi Q.A., Snehi S.K., Khan M.S., Raj S.K.; RT ; RL Submitted (22-FEB-2010) to the INSDC. RL Plant Molecular Virology, National Botanical Research Institute, Rana RL Pratap Marg, Lucknow, U.P. 226001, India XX DR MD5; 8090b2036789666aa837c47321209fb6. XX FH Key Location/Qualifiers FH FT source 1..1177 FT /organism="Jatropha mosaic India virus" FT /segment="DNA A" FT /host="Withania somnifera" FT /isolate="Rajasthan" FT /mol_type="genomic DNA" FT /country="India:Hindaun city, Rajasthan" FT /collected_by="Geetesh Baghel" FT /collection_date="Aug-2009" FT /db_xref="taxon:1034067" FT gene <1..357 FT /gene="AV1" FT CDS <1..357 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="involved in encapsidation of virion" FT /db_xref="GOA:D6P748" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D6P748" FT /protein_id="ADF81039.1" FT /translation="LVRDRKPVDKPQDFGEVFNMFDNEPSTATVKNMYRDRYQVLRKWS FT STVTGGQYASKEQAIVRRFFRVNNYVVYNQQEAGKYENHTENALMLYMACTHASNPVYA FT TLKIRIYFYDSVSN" FT gene complement(354..758) FT /gene="AC3" FT CDS complement(354..758) FT /codon_start=1 FT /gene="AC3" FT /product="REn protein" FT /note="increases viral replication" FT /db_xref="GOA:D6P749" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D6P749" FT /protein_id="ADF81040.1" FT /translation="MDSRTGELITAAQAMNGVYTWEVPNPLYFKIIDHSSRPFLMEHDI FT ITVQIRSNHNLRKALGLLQCWMDFKIGTTLRPQTLRFLRFFKYQVLRYLDMLGVICINT FT VVRAVEHVLYSVLTGTDSIEQSNLIKFKIY" FT gene complement(499..906) FT /gene="AC2" FT CDS complement(499..906) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator protein" FT /note="AC2; TrAP; transcriptional activator for viral sense FT genes" FT /db_xref="GOA:D6P750" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D6P750" FT /protein_id="ADF81041.1" FT /translation="MRPSSPSTGHSTPVPIKVQHRAAKRRAIRRRRVDLNCGCSYYVHI FT NCHNHGFTHRGTHHCSSGDEWRLYLGGSKSPLFQDHRPQQPAVPDGTRHNNRPDTVQPQ FT PEESVGTTSMLDGFQNRDDLTASDLAFLEVF" FT gene complement(836..>1177) FT /gene="AC1" FT CDS complement(836..>1177) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /note="AC1; Rep" FT /db_xref="GOA:D6P751" FT /db_xref="InterPro:IPR001301" FT /db_xref="UniProtKB/TrEMBL:D6P751" FT /protein_id="ADF81042.1" FT /translation="LCGHLDLSPRVYRNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSN FT TKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEPKNTALKAWAIRNATFISLDGPLYSS FT ADQGSTQGS" XX SQ Sequence 1177 BP; 283 A; 268 C; 295 G; 331 T; 0 other; ctcgtcaggg atcgtaagcc cgtggacaaa ccccaggatt ttggtgaggt gttcaacatg 60 ttcgataacg agcccagtac tgctacggtt aaaaacatgt accgtgatcg gtaccaggtg 120 ttaaggaagt ggagttccac tgtcactggt ggtcagtatg cgagcaaaga gcaggcaata 180 gttaggcgtt tttttagggt taataattat gttgtgtata atcagcaaga ggctggtaag 240 tacgaaaacc atacggagaa tgcattgatg ctgtacatgg cgtgtactca cgcctctaac 300 cccgtgtatg ctacgcttaa gatacggatc tacttctacg attcagtatc caattaataa 360 attttaaatt ttattaaatt tgactgctca atactgtcag tccctgtgag tacactgtac 420 aatacatgct ctacggctct aacgaccgta tttatacata tgacccctaa catgtccagg 480 tatctgagta cctggtactt aaaaaacctc aagaaacgca aggtctgagg ccgtaaggtc 540 gtcccgattt tgaaatccat ccagcattga agtagtccca acgctttcct caggttgtgg 600 ttggaccgta tctggacggt tattatgtcg tgttccatca ggaacggccg gctgctgtgg 660 tctatgatct tgaaatagag gggatttgga acctcccagg tatagacgcc attcatcgcc 720 tgagctgcag tgatgagttc ccctgtgcgt gaatccatgg ttgtggcagt tgatgtgcac 780 gtagtacgag cacccgcagt tgaggtctac tctccgtcgc cggatggccc tacgcttagc 840 tgccctgtgt tgaaccttga tcggcactgg agtagagtgg cccgtcgagg gagatgaagg 900 tcgcatttct tattgcccaa gccttcaatg ccgtattctt cggctcgtca aggaactctt 960 tatagctgga attgggccca ggattgcaca ggaagatagt gggtatccca cctttaattt 1020 gaactggctt tccgtatttg gtgttgcttt gccagtccct ctgggccccc atgaattcct 1080 tgaagtgctt taggtagtgg ggatctacgt catcaatgac gttgtaccac gcgtcgtttc 1140 tgtagaccct aggactcaag tccagatggc cacatag 1177 //