ID GU732204; SV 1; circular; genomic DNA; STD; VRL; 2759 BP. XX AC GU732204; XX DT 27-APR-2010 (Rel. 104, Created) DT 08-MAY-2018 (Rel. 136, Last updated, Version 4) XX DE Radish leaf curl virus isolate ToLCPKV [IN:Bih], complete genome. XX KW . XX OS Radish leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2759 RX DOI; 10.1007/s00705-012-1486-5. RX PUBMED; 23053516. RA Kumar J., Singh S.P., Kumar A., Khan J.A., Tuli R.; RT "Detection and characterization of a new betasatellite: variation in RT disease symptoms of tomato leaf curl Pakistan virus-India due to associated RT betasatellite"; RL Arch. Virol. 158(1):257-261(2013). XX RN [2] RP 1-2759 RA Kumar J., Kumar A., Khan J.A.; RT "Complete nucleotide sequence of Tomato leaf curl Pakistan virus infecting RT tobacco in India"; RL Unpublished. XX RN [3] RP 1-2759 RA Kumar J., Kumar A., Khan J.A.; RT ; RL Submitted (09-FEB-2010) to the INSDC. RL Molecular Virology Lab, National Botanical Research Institute, Rana Pratap RL Marg, Lucknow, U.P. 226001, India XX DR MD5; 7575b1ba3a3e4a8a3e88aaf28c846da6. XX FH Key Location/Qualifiers FH FT source 1..2759 FT /organism="Radish leaf curl virus" FT /host="tobacco" FT /isolate="ToLCPKV [IN:Bih]" FT /mol_type="genomic DNA" FT /country="India:Bihar" FT /isolation_source="leaf" FT /db_xref="taxon:435646" FT gene 145..501 FT /gene="AV2" FT CDS 145..501 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:D5L0V9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D5L0V9" FT /protein_id="ADF42587.1" FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVENTYSPDTLGYDLIRDL FT ISVIRARNYVEATSRYNHFHARFEGTSPSQLRQPICEPCCCPHCPRHKGKSMGEQTHEQ FT KAQDVQDVQKSRCS" FT gene 305..1075 FT /gene="AV1" FT CDS 305..1075 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:D5L0W0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D5L0W0" FT /protein_id="ADF42588.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHISKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVSN" FT gene complement(1072..1476) FT /gene="AC3" FT CDS complement(1072..1476) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:D5L0W1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D5L0W1" FT /protein_id="ADF42589.1" FT /translation="MDSRTGELITAAQAENGMFIWEIQNPLYFKITEHHNRPFLMNQDI FT ITVQIQFNHNLRKALGIHKCFLAFRIWMTSHPPTVRFLRVFKTQVLKYLNNLGIVSINN FT VIRAVDHVLWNVLEHVVYVDQSSSIKFNIY" FT gene complement(1217..1621) FT /gene="AC2" FT CDS complement(1217..1621) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:D5L0W2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D5L0W2" FT /protein_id="ADF42590.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALA FT CHDHGFTHRGTHHCSSSREWHVYLGDSKSPVFQDNRAPQQAIPNEPRHHHRPDTVQSQP FT EESVGDTQMFPSLPNLDDLTPSDCSFLKGL" FT gene complement(1524..2606) FT /gene="AC1" FT CDS complement(1524..2606) FT /codon_start=1 FT /gene="AC1" FT /product="rep" FT /note="replication-associated protein" FT /db_xref="GOA:D5L0W3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="UniProtKB/TrEMBL:D5L0W3" FT /protein_id="ADF42591.1" FT /translation="MPPKHFQINAKNYFLTYPKCSLTKEEALSQLQNLQTPVNKKYIKI FT CRELHENGEPHLHVLIQFEGKYKCKNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYME FT KDGDTLDWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRIIKDSPQKIMYFNIII FT YMLIYIGFIHLPWRFMFLLFLLLLYIKFRKNLRNGLPRTSSVPLRGPMRPKSVVIEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGAQKDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLDEEKNSALKNWALKNAIFVTLEGPLY FT SGSNQSAAQASQEGDQTSES" FT gene complement(2159..2458) FT /gene="AC4" FT CDS complement(2159..2458) FT /codon_start=1 FT /gene="AC4" FT /product="transcriptional regulator protein" FT /note="involved in symptom expression" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D5L0W4" FT /protein_id="ADF42592.1" FT /translation="MKMGNLIFTCSSSSKANTSAKINDSSTSYPQPGQHISIRTSRELN FT PAPMSSPIWRRTETPSTGESFRSTDDLLEGDNRQPTTLTPQRLTQAVSQRLLES" XX SQ Sequence 2759 BP; 729 A; 554 C; 643 G; 833 T; 0 other; accggatggc cgcgcttttt ttgtggcccc cacaaagcac taactgacaa tgacatgtgg 60 tccaatgaga atcgttcctc gtagcctaat tgttttgtgg tcccctctat aaacttagtg 120 cgcaagttgt gcttcacatt caatatgtgg gatccgttat tgaatgagtt tcccgaaacc 180 gttcacggtt ttaggtgtat gttagcagtt aaatatctgc agttagtaga aaatacgtat 240 tccccagata ctctgggata cgatttaatt agggatttga tttcagtaat aagggccagg 300 aattatgtcg aagcgaccag cagatataat catttccacg cccgcttcga aggtacgtcg 360 ccgtctcaac ttcgacagcc catatgtgag ccgtgctgct gcccccattg tccgcgtcac 420 aaaggcaaaa gcatgggcga acagacccat gaacagaaag cccaggatgt acaggatgta 480 cagaagtcca gatgttccta gaggatgtga aggcccatgt aaggttcagt cctttgagtc 540 cagacatgat atccagcata ttagtaaagt catgtgtgtc agtgatgtta ctcgtggaac 600 tgggcttacc catagagtgg gtaagagatt ttgtgtgaag tctgtgtatg ttttgggtaa 660 gatatggatg gatgagaaca ttaagaccaa gaatcacacg aatagtgtga tgttttttct 720 agttagagat cgtagaccag ttgataaacc tcaagatttt ggagaggtgt ttaacatgtt 780 tgataatgag cccagtacgg cgactgtgaa gaatgttcat cgtgataggt atcaagtgct 840 gcgcaaatgg tatgcaactg tcaccggtgg acaatacgct tcaaaggaac aagctctcgt 900 gaagaagttt attagggtta ataattatgt tgtgtataac cagcaagaag ctggcaagta 960 tgagaatcat tctgagaatg ctttaatgtt gtatatggcg tgtactcacg cctctaaccc 1020 agtgtatgct actttgaaaa tacggatcta cttctatgat tccgtatcaa attaataaat 1080 attgaatttt attgaagatg attggtctac atatacaaca tgctctaata cattccataa 1140 tacatgatcg actgctctaa ttacattatt aatactgaca attcctagat tatttaaata 1200 cttaagcact tgggtcttaa agacccttaa gaaacgaaca gtcggagggt gtgaggtcat 1260 ccagattcgg aaggctagga aacatttgtg tatccccaac gctttcctca ggttgtgatt 1320 gaactgtatc tggacggtga tgatgtcttg gttcattagg aatggcctgt tgtggtgctc 1380 tgttatcttg aaatacaggg gattttgaat ctcccagata aacatgccat tctctgcttg 1440 agctgcagtg atgagttccc ctgtgcgtga atccatggtc gtggcaggct aatgctatga 1500 agtatgaaca cccacaaggt agatcaactc tccgacgtct ggtccccttc ttggctagcc 1560 tgtgctgcac tttgattgga acctgagtag agtgggcctt cgagggtgac gaagatcgca 1620 ttctttaaag cccaattttt gagtgcagaa ttcttctctt cgtctaaata ctctttatag 1680 cttgaattgg gtcctggatt gcagaggaag atagtgggaa tgccaccttt aatttgaact 1740 ggctttccgt actttgtatt tgattgccag tctttttggg cccccatgaa ttctttaaag 1800 tgctttaagt agtggggatc gacgtcatca atgacgttgt accaggcctc attactgtac 1860 acctttggac taaggtctaa atgaccacac aaataattat gtggacccag tgacctggcc 1920 cacattgtct tccccgtcct actatcaccc tcaatcacta cacttttagg tctcattggc 1980 ccgcgcagcg gcactgacga cgttctcggc agcccattcc tcaagttctt ccggaacttg 2040 atgtaaagaa gaagaagaaa aaggagaaac ataaacctcc atgggaggtg tataaatcct 2100 atgtaaatta gcatataaat tatgatattg aagtacataa tcttttgggg cgaatccttt 2160 atgattctaa gagcctctga cttactgcct gcgttaagcg ctgcggcgta agcgtcgttg 2220 gctgtctgtt gtccccctct agcagatcgt ccgtcgatct gaaactctcc ccagtcgagg 2280 gtgtctccgt ccttctccat ataggacttg acatcggagc tggatttagc tccctggatg 2340 ttcggatgga aatgtgctga cctggttggg gatacgaggt cgaagaatcg ttgatttttg 2400 cacttgtatt tgccttcgaa ctggatgagc acgtgaagat gaggttcccc attttcatga 2460 agctctctgc agattttaat gtattttttg tttactgggg tttgtaggtt ttgtagttgg 2520 gaaagtgctt cctctttagt aagggagcat ttgggataag tgaggaaata atttttggca 2580 ttaatctgga aatgctttgg gggcatgttg acttggtcag aggacccgat tgaactatct 2640 tgcaactctc ccctgtatat cgggtcccta tatatagtgg gactgaaatg gcaatattgt 2700 aattacgata agaaattcaa aatcctcacg ctccaatcag cggccatccg tataatatt 2759 //