ID GU723710; SV 1; circular; genomic DNA; STD; VRL; 2740 BP. XX AC GU723710; XX DT 01-APR-2010 (Rel. 104, Created) DT 01-APR-2010 (Rel. 104, Last updated, Version 1) XX DE Tomato leaf curl Taiwan virus isolate LY5 segment DNA-A, complete sequence. XX KW . XX OS Tomato leaf curl Taiwan virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RA Tsai W.S., Shih S.L., Green S.K., Kenyon L., Jan F.-J.; RT "Molecular diversity and pathogenicity of tomato-infecting begomoviruses in RT Taiwan"; RL Unpublished. XX RN [2] RP 1-2740 RA Tsai W.S., Shih S.L., Green S.K., Kenyon L., Jan F.-J.; RT ; RL Submitted (08-FEB-2010) to the INSDC. RL Virology Unit, AVRDC-The World Vegetable Center, PO Box 42, Shanhua, RL Tainan, Taiwan 74199, ROC XX DR MD5; cdb43063ba4a1ead793d8fbe5e6c258f. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Tomato leaf curl Taiwan virus" FT /segment="DNA-A" FT /host="tomato" FT /isolate="LY5" FT /mol_type="genomic DNA" FT /country="Taiwan:Liuying, Tainan" FT /collection_date="2007" FT /db_xref="taxon:196093" FT CDS 132..473 FT /codon_start=1 FT /product="V2 protein" FT /db_xref="GOA:A5JHC0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A5JHC0" FT /protein_id="ADE09041.1" FT /translation="MWDPLLNDFPESVHGLRCMLAIKYLHLVENTYSPDTLGYDLIRDL FT ILVIRARDYVEATRRYSHFHSRFQGSSPSELRQPVWQPCSCPHCPRHKQKEFMGESALV FT QKAQDVQDV" FT CDS 292..1065 FT /codon_start=1 FT /product="V1 protein" FT /note="coat protein" FT /db_xref="GOA:Q09M61" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q09M61" FT /protein_id="ADE09038.1" FT /translation="MSKRPADIVISTPASKVRRRLNFASPYGNRVAAPTVLVTNKKSSW FT VNRPLFRKPKMYRMYKSPDVPRGCEGPCKVQSFEQRHDISHVGKVLCVSDVTRGNGLTH FT RVGKRFCVKSIYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQIFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYACKEQALVRKFMKINNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT CDS complement(1062..1466) FT /codon_start=1 FT /product="C3 protein" FT /db_xref="GOA:D5KYA2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D5KYA2" FT /protein_id="ADE09040.1" FT /translation="MDSRTGELITAAQAENGVYTWTINNPLYFKITQHNQRPFLRNHDV FT TTIQVQFNYNLRKALGIHQCFIICQIWTRLQPRTSHFLRVFKYQCMKYLDNLGVISLNN FT VFRAMRHVLYNVIEGTIDTKFSHIIKFKIY" FT CDS complement(1207..1614) FT /codon_start=1 FT /product="C2 protein" FT /db_xref="GOA:D5KYA3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D5KYA3" FT /protein_id="ADE09039.1" FT /translation="MRSSSPSPSHSTQVPIKVQHKIAKKRPIRRRRVDLPCGCSYYLGI FT NCASHGFSHRGTHHCSSSREWRVYLDNQQSPLFQNNTTQPETISTKPRRNDNTSSIQLQ FT PEESVGNTPVFYNLPDLDSFTTSDLAFLEGI" FT CDS complement(1514..2602) FT /codon_start=1 FT /product="C1 protein" FT /note="replication-associated protein" FT /db_xref="GOA:D5KYA4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D5KYA4" FT /protein_id="ADE09037.1" FT /translation="MPPLNKFRINAKNYFLTYPHCSLTKEEALSQIQALQTPTNKLFIR FT VCRELHEDGTPHLHILIQFEGKFQCKNNRFFDLTSPTRSAHFHPNIQGAKSSTDVKTYM FT DKDGDVLDHGIFQVDGRSARGGCQSANDAYAEAINSGSKAEALNILREKAPKDFVLQFH FT NLNNNLDRIFAPPLEVYISPFNFSSFDQVPRELVEWVAENVRDSAARPWRPMSIVVEGE FT SRTGKTLWARSLGPHNYLCGHLDLSPRVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNFALKDWALKNAEFITLTEPL FT YSSANQGPTQNSEEETNSQAEG" FT CDS complement(2152..2445) FT /codon_start=1 FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A5JHB9" FT /protein_id="ADE09042.1" FT /translation="MGLLTCTFSSNSKENSNVKITDSSTSHPQPGQHISIRTFRELRAQ FT QMSKPIWTKTETYLIMEFSRSMEDQLEEVANLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2740 BP; 721 A; 534 C; 609 G; 876 T; 0 other; accggatggc cgcgtttttt ttaagtgggt cctacgcact aatgttggtc ggccaataga 60 aacgctccct caaagcttat taacaaaaat acccgttata aatacttggt ggctaagtta 120 caatcagtaa aatgtgggat ccacttttaa atgattttcc ggagtctgta catggtctac 180 ggtgtatgct tgccattaag tatctacatc ttgtagaaaa tacatattcc ccggatactt 240 tgggttacga tcttatacgt gatttgattt tagttatccg agctagggat tatgtcgaag 300 cgacccgccg atatagtcat ttccactccc gcttccaagg ttcgtcgccg tctgaacttc 360 gccagcccgt atggcaaccg tgtagctgcc cccactgtcc tcgtcacaaa caaaaagagt 420 tcatgggtga atcggccctt gttcagaaag cccaagatgt acaggatgta taaaagccca 480 gatgttcctc gtggttgtga aggcccatgt aaggtacagt catttgaaca gcgtcatgat 540 atatcccatg tgggcaaggt attatgtgtg tccgatgtca cacgtggtaa tgggctgacc 600 catcgtgttg ggaagaggtt ttgtgttaag tctatttatg tgttgggtaa gatatggatg 660 gatgagaata tcaagacgaa gaatcacaca aatactgtga tgttcttctt agtccgtgat 720 agaaggcctt atggtactcc acaagatttc ggtcagatct ttaatatgta tgataatgag 780 cctagcactg caacggtgaa gaatgataat agagataggt ttcaagttct ccgtcgattc 840 caggctacgg tgactggcgg tcagtatgcg tgcaaagaac aagctctagt taggaagttt 900 atgaaaatca acaaccatgt tacttataat caccaagagg ctgctaaata cgataaccat 960 acagagaatg ctttgttgtt gtatatggca tgtactcatg ccagtaatcc tgtgtatgct 1020 actttgaaaa tcagaatcta tttttatgat tctgttcaaa attaataaat tttaaatttt 1080 attatatgtg aaaacttagt atcgattgtg ccctctatta cattgtatag tacatgtctc 1140 attgctctaa atacattgtt taaactaata acgcctaaat tgtctaaata cttcatacat 1200 tggtacttaa ataccctcaa gaaatgcgag gtccgaggtt gtaaacgagt ccaaatctgg 1260 caaattataa aacactggtg tattcccaac gctttcctca ggttgtagtt gaattgaact 1320 tgtattgtcg ttacgtcgtg gtttcgtaga aatggtctct ggttgtgttg tgttattttg 1380 aaatagaggg gattgttgat tgtccaggta tacacgccat tctctgcttg agctgcagtg 1440 atgagttccc ctgtgcgaga atccatgtga tgcgcagtta attccaagat aatacgagca 1500 cccacaagga agatcaaccc tccgcctgcg aattggtctc ttcttcgcta ttttgtgttg 1560 gaccttgatt ggcacttgag tagagtggct cggtgagggt gatgaactcc gcattcttta 1620 aagcccagtc tttgagtgcg aaattctttt cttcgtctaa gtactcttta tatgatgatg 1680 ttggccctgg attgcaaagg aagattgttg ggataccacc tttaatttga attggtttcc 1740 cgtatttggt gttgctttgc cagtcccttt gggcccccat gaattcttta aagtgcttta 1800 gatagtgggg atcgacgtca tcaatgacgt tgtaccatgc ctcattgctg tagactcttg 1860 ggcttaggtc aagatgacca cacaagtaat tgtgtgggcc tagagacctg gcccaaagtg 1920 tcttccctgt acgactctct ccctctacaa caatactcat gggtctccat ggccgcgcag 1980 cggaatctct cacgttctcg gcaacccatt ctacaagttc tcttggaact tgatcaaatg 2040 aagaaaaatt aaaaggagaa atataaacct ccaatggagg tgcaaaaatc ctatctaaat 2100 tattatttaa attatgaaac tgtaaaacaa aatctttggg agctttctcc cttaatatat 2160 tgagggcctc agctttggac cctgaattga ttgcctcggc atatgcgtcg ttggcagatt 2220 ggcaacctcc tctagctgat cttccatcga cctggaaaat tccatgatca agtacgtctc 2280 cgtctttgtc catataggtt ttgacatctg ttgagctctt agctccctga atgttcggat 2340 ggaaatgtgc tgacctggtt ggggatgtga ggtcgaagaa tctgttattt ttacattgga 2400 attttccttc gaattggatg agaatgtgca ggtgaggagt cccatcttcg tgaagctctc 2460 tgcaaaccct aatgaatagc ttatttgttg gtgtttgtag agcttgtatt tgggaaagtg 2520 cctcttcttt ggtcagggag cagtgtggat atgtgaggaa gtagttcttt gcatttatcc 2580 tgaatttatt aagtggaggc atgttgactt ggtcaatcgg tgtctctcaa acttctctat 2640 gtatcggtgt attggggtct tatttatatc tggacactaa atggcattta tgtaattaca 2700 taaaattacc aatgggtaaa gcggccatcc gtttaatatt 2740 //