ID GU580897; SV 1; linear; genomic DNA; STD; VRL; 2778 BP. XX AC GU580897; XX DT 02-MAR-2011 (Rel. 108, Created) DT 23-DEC-2012 (Rel. 115, Last updated, Version 3) XX DE African cassava mosaic virus isolate AOS segment A precoat protein (AV2), DE coat protein (AV1), replicational enhancer protein (AC3), transcriptional DE activator (AC2), replicase (AC1), and transcriptional regulator AC4 (AC4) DE genes, complete cds. XX KW . XX OS African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2778 RA Matic S., Pais da Cunha A.T., Thompson J.R., Tepfer M.; RT "An analysis of viruses associated with cassava mosaic disease in three RT Angolan provinces"; RL J. Plant Pathol. 94(2):443-450(2012). XX RN [2] RP 1-2778 RA Matic S., Thompson J.R., da Cunha A.T.P., Tepfer M.; RT ; RL Submitted (22-JAN-2010) to the INSDC. RL Istituto di Virologia Vegetale, CNR, Strada delle Cacce 73, Torino 10135, RL Italy XX DR MD5; ff9b0b024b610b44d991d7421a4b530d. XX FH Key Location/Qualifiers FH FT source 1..2778 FT /organism="African cassava mosaic virus" FT /segment="A" FT /host="Manihot esculenta" FT /isolate="AOS" FT /mol_type="genomic DNA" FT /country="Angola" FT /collection_date="08-Jan-2009" FT /db_xref="taxon:10817" FT gene 141..482 FT /gene="AV2" FT CDS 141..482 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:F1AFX5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:F1AFX5" FT /protein_id="ADY17023.1" FT /translation="MWDPLVNEFPDSVHGFRCMLAIKYLQALEDTYEPNTLGHDLVRDL FT ISVIRARNYVEATRRYHHFHSRLQGSSKAELRQPIQEPCYCSHCPRHKSKTGLDEQAHV FT QKAHDVQDV" FT gene 301..1077 FT /gene="AV1" FT CDS 301..1077 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:F1AFX6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:F1AFX6" FT /protein_id="ADY17024.1" FT /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAW FT MNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTH FT RVGKRFCIKSIYILGKIWMDENIKKQNHTNNVIFYLLRDRRPYGNAPQDFGQIFNMFDN FT EPSTATIKNDLRDRFQVLRKFHATVIGGPSGMKEQVLVKRFYKLNHHVTYNHQEAGKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN" FT gene complement(1074..1478) FT /gene="AC3" FT CDS complement(1074..1478) FT /codon_start=1 FT /gene="AC3" FT /product="replicational enhancer protein" FT /db_xref="GOA:F1AFX7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:F1AFX7" FT /protein_id="ADY17025.1" FT /translation="MDLRTGELITAPQAMNGVYIWELNNPLYFTITRHQQRPFLLNQDI FT ITVQVRFNHNLRKALGIHKCFLNFKIWTTLHPQTGLFLRVFRYQVLKYLDNIGVISIND FT VIRAADHVLFNVIEKTIECQLTHEIKFNVY" FT gene complement(1219..1626) FT /gene="AC2" FT CDS complement(1219..1626) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator" FT /db_xref="GOA:F1AFX8" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:F1AFX8" FT /protein_id="ADY17026.1" FT /translation="MQSSSPSQNHSTQVPIKVNHRQFKKRAIRRRRVDLVCGCSYYLHI FT NCSNHGFTHRGTHHCSSSNEWRVYLGTKQSPVFHNNQAPTKTLPAEPGHHNCPGSIQSQ FT PQEGAGDSQMFSQLQDLDDLTPSDWSFLKGL" FT gene complement(1535..2611) FT /gene="AC1" FT CDS complement(1535..2611) FT /codon_start=1 FT /gene="AC1" FT /product="replicase" FT /db_xref="GOA:F1AFX9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:F1AFX9" FT /protein_id="ADY17027.1" FT /translation="MRTPRFRVQAKNVFLTYPKCSIPKEHLLSFIQTLSLPSNPKFIKI FT CRELHQNGEPHLHALIQFEGKITITNNRLFDCVHPSCSTSFHPNIQGAKSSSDVKSYLD FT KDGDTVEWGQFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELVPKDFVLQFHN FT LNSNLDRIFQEPPAPYVSPFPCSSFDQVPDELEEWVADNVRDSAARPWRPNSIVIEGDS FT RTGKTIWARSLGPHNYLCGHLDLSPKVFNNDAWYNVIDDVDPHYLKHFKEFMGSQRDWQ FT SNTKYGEPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQAALKAWALKNAIFITLTEPLY FT SGSNQSQSQTIQEARHQA" FT gene complement(2155..2577) FT /gene="AC4" FT CDS complement(2155..2577) FT /codon_start=1 FT /gene="AC4" FT /product="transcriptional regulator AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:F1AFY0" FT /protein_id="ADY17028.1" FT /translation="MSFSHTQSVLYPKNTCCHSFKHSLSLQTLSSLKSVESCIRMGNLT FT CMPSSNSRAKSRLRTIVSSIVYTQAVAPVSTPTFKVPNQAQMSSPIWIRTETQSNGDNF FT RSMDDLLEEVNNQRMMLTPKRLTAEVSQKLLMSLGN" XX SQ Sequence 2778 BP; 753 A; 551 C; 674 G; 800 T; 0 other; taatattacc ggttggcccc gcccccttta aacgtgggtc cgcgcactac ttatgtcggc 60 caatcatgtt gtagctttaa agggtattta ttagtggtgg accactatat acttgcaggc 120 gaagtcgttg cgagtgcgcg atgtgggatc cactggtgaa tgagtttcca gactcggtgc 180 acgggtttag gtgtatgctt gcaattaaat atttgcaggc cttagaggat acatacgagc 240 ccaatacctt gggccacgat ctggttaggg atctaatctc agttatcagg gctcgtaatt 300 atgtcgaagc gaccaggaga tatcatcatt tccactccag gctccaaggt tcgtcgaagg 360 ctgaacttcg acagcccata caggaaccgt gctactgctc ccactgtcca cgtcacaaat 420 cgaaaacggg cctggatgaa caggcccatg tacagaaagc ccatgatgta caggatgtat 480 agaagcccag atatacctag gggctgtgaa ggcccatgta aggtccagtc gtttgagcag 540 agggatgatg ttaaacacct tggtatctgt aaggtgatta gtgatgtgac tcgtgggcct 600 gggctgacac acagggtcgg aaagaggttc tgtatcaagt ccatttacat tcttggtaag 660 atctggatgg atgaaaatat taagaagcag aatcacacta ataatgtgat tttttacctg 720 cttagggata gaaggcctta tggcaatgcg ccccaagact ttgggcagat atttaacatg 780 tttgataatg agcccagtac tgcaacaatt aagaacgatt tgagggacag gtttcaggtt 840 ttgaggaaat ttcatgccac tgttattggt ggtccatcag gcatgaagga gcaggttttg 900 gtgaaaaggt tttacaagtt aaatcatcac gtgacatata atcatcagga ggcagggaag 960 tatgagaatc acacagagaa tgctttgctt ctgtatatgg catgtactca tgcctccaat 1020 cctgtatatg ctacgttaaa aatacgtata tacttctatg acagtattgg caattaataa 1080 acattgaatt ttatttcatg agtcaactga cactcaatag ttttttcaat tacattgaat 1140 aaaacatgat cagcagctct aattacatcg ttaattgaga taacacctat attatccaag 1200 tatttaagta cttggtatct aaagaccctt aagaaaagac cagtctgagg gtgtaaggtc 1260 gtccagatct tgaagttgag aaaacatttg tgaatcccca gcgccttcct gaggttgtga 1320 ttgaatcgaa cctggacagt tatgatgtcc tggttcagca ggaagggtct ttgttggtgc 1380 ctggttattg tgaaatacag gggattgttt agttcccaga tatacacgcc attcattgct 1440 tgaggagcag tgatgagttc cccggtgcgt aaatccatga ttggagcagt tgatgtggag 1500 gtaatatgaa cagccacaga caagatccac tcttctacgc ctgatggcgc gcttcttgaa 1560 ttgtctgtga ttgactttga ttggaacctg agtagagtgg ttctgtgagg gtgatgaaga 1620 ttgcattctt taatgcccaa gcctttagtg ctgcttgctt ttcctcgtct agaaactctt 1680 tataggacga ggtaggtcct ggattgcaga ggaagatagt gggaattcca cccttaattt 1740 gaacgggttc cccgtatttc gtgttggact gccagtccct ctgggacccc atgaattcct 1800 taaagtgctt taggtagtgg ggatcgacgt catcaatgac gttgtaccag gcatcattat 1860 tgaagacctt tggactaagg tccaggtgtc cacacaggta attgtgtggg cctaaagatc 1920 tggcccatat cgtcttccct gttctgctat caccttctat gacaatacta ttgggtctcc 1980 atggccgcgc agcggaatcc ctaacattat cagcgaccca ttcttcaagt tcatcaggaa 2040 cttggtcaaa ggaagaacat gggaagggag aaacataagg agctggtggc tcctggaaaa 2100 tcctatctaa attactattt agattatgaa actgaagtac aaagtccttt gggactaatt 2160 ccctaatgac attaagagct tctgacttac ttccgctgtt aagcgctttg gcgtaagcat 2220 cattcgctga ttgttgacct cctctagcag atcgtccatc gatctgaaat tgtccccatt 2280 cgactgtgtc tccgtcctta tccagatagg acttgacatc tgagcttgat ttggcacctt 2340 gaatgttggg gtggaaactg gtgctacagc ttgggtgtac acaatcgaag agacgattgt 2400 tcgtaatcgt gattttgccc tcgaattgga tgagggcatg caagtgaggt tccccattct 2460 gatgcagctc tctacagatt ttaatgaact tagggtttga agggagagag agtgtttgaa 2520 tgaatgacag caggtgttct ttgggtatag aacactttgg gtatgtgaga aagacattct 2580 tggcttgaac tctaaaacga ggagttctca ttttgaccaa gtcaattgga gacactcaac 2640 tggagacact cgtgagcatc tcctcctgtt aattggagac attatatagt tgtctctaaa 2700 tggcattatt gtaataagtg gaactttaat ttgaatgaaa agctcaaaag gcgcagaaca 2760 cccaaggggc caaccgta 2778 //