ID   GU390594; SV 1; linear; genomic RNA; STD; VRL; 1665 BP.
XX
AC   GU390594;
XX
DT   28-SEP-2010 (Rel. 106, Created)
DT   28-SEP-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Homalodisca vitripennis reovirus isolate SC20 segment 6, complete sequence.
XX
KW   .
XX
OS   Homalodisca vitripennis reovirus
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus;
OC   unclassified Phytoreovirus.
XX
RN   [1]
RP   1-1665
RX   DOI; 10.1016/j.virol.2010.08.002.
RX   PUBMED; 20739043.
RA   Stenger D.C., Sisterson M.S., French R.;
RT   "Population genetics of Homalodisca vitripennis reovirus validates timing
RT   and limited introduction to California of its invasive insect host, the
RT   glassy-winged sharpshooter";
RL   Virology 407(1):53-59(2010).
XX
RN   [2]
RP   1-1665
RA   Stenger D.C.;
RT   ;
RL   Submitted (06-JAN-2010) to the INSDC.
RL   USDA-ARS, 9611 S. Riverbend Ave., Parlier, CA 93648, USA
XX
DR   MD5; b12603ed79b34ea6ec24f4dc800eefc7.
XX
CC   GenBank Accession Numbers GU390589-GU390600 represent the complete
CC   genome of Homalodisca vitripennis reovirus SC20 isolate.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1665
FT                   /organism="Homalodisca vitripennis reovirus"
FT                   /segment="6"
FT                   /host="Homalodisca vitripennis"
FT                   /isolate="SC20"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:411854"
FT   CDS             46..1590
FT                   /codon_start=1
FT                   /product="non-structural protein"
FT                   /db_xref="UniProtKB/TrEMBL:E2E2V5"
FT                   /protein_id="ADN64775.1"
FT                   /translation="MDLKSLFNIFVTSEIDYKSFDPLPESEELSGAVQLDKLECAILPL
FT                   AINPGIINIIHDAIEELDNLDKMKARFGSSLGLRIYNAYKSQNVEAKQCPIIGIPLMGS
FT                   TCAGLFRNGGHLLGYKGESYKDTYPVTIKRFLSNDHDLKTNRVSCFQAFAWMCFTNVFA
FT                   ERFQYETKNYEATYAAFSNPNTYARNSIFWDLKDDGAHSMMSMIHVINKSVSQALYYAV
FT                   MASAVADANADLNDCVEESKVFDGQAILRELAALVEKTVMTPSLYALIAYIWLSTPADT
FT                   EAGAVVSALLWNDDVEFISHYLHTFTHPTATSTSTKKIKEIETGYTCVVNNGYTSYITV
FT                   LMGVADSESFLKSDLSQYGLLKFKTSTDSICLFMFENVDVKTGKTMTMIDMSKTTFQTV
FT                   VNVTGIDTYVLQNSKNYCIDWIRCVSILNYGNLTFTADDYNWISKMSADVVPWAHGDLS
FT                   DCNVHGDAYFTLLKRMVGFSASTESVREILLASKDLVCKLTPVARGVLTFIISRKA"
XX
SQ   Sequence 1665 BP; 540 A; 281 C; 358 G; 486 T; 0 other;
     ggcatgaacg cctgaaaaga aaatcgagtg tgtacctgga gtgacatgga tctgaaatct        60
     cttttcaaca tatttgtaac atcagaaata gattataaaa gcttcgatcc acttcctgaa       120
     agtgaggaat tgtcaggagc agttcaatta gataaattag aatgtgctat tctaccatta       180
     gccattaacc caggaataat aaatataata catgatgcta ttgaagagtt agataaccta       240
     gataaaatga aggctaggtt tggatcatcg ctaggattac gaatttataa cgcttataag       300
     tcacaaaatg ttgaggcaaa gcagtgccca ataataggga ttccacttat gggatctact       360
     tgtgccggat tgttcaggaa tggaggtcat ttgcttggct ataaaggtga aagctataaa       420
     gacacatacc cggtgaccat caaaagattt ttatctaatg atcatgattt gaaaaccaat       480
     agggtgagtt gttttcaagc attcgcttgg atgtgcttca ctaatgtttt cgctgaaagg       540
     tttcaatatg aaacaaagaa ctatgaggca acatatgccg cattttcgaa tcctaacacg       600
     tacgctagaa acagcatatt ttgggattta aaagatgatg gcgcacacag tatgatgagt       660
     atgatacacg taataaacaa aagcgtgtct caagctttgt attatgcagt aatggcatct       720
     gcagtagctg acgcaaatgc agatcttaat gattgcgttg aagaatctaa agtatttgat       780
     ggtcaagcta tcctgcgcga gttggcagcc ttagtagaga agacagttat gacgccaagt       840
     ttatacgcat taattgcata catatggtta agtacacctg cggatacgga ggctggagct       900
     gtggtttcag cgctattatg gaatgacgat gttgaattca tctcacacta tctacacacg       960
     tttacacatc caacagcgac ttcgacttca accaaaaaga taaaggagat agagactgga      1020
     tacacatgtg tagtgaataa tgggtataca agttatatca ctgtattaat gggtgtcgcc      1080
     gactctgaat catttctgaa atcagatcta tcacagtatg gcttattgaa attcaaaaca      1140
     tcaacagatt caatatgtct attcatgttt gaaaatgtcg atgtaaaaac tggcaaaact      1200
     atgaccatga tagacatgtc aaagactact ttccaaaccg ttgttaatgt aactggtata      1260
     gacacctatg tcttgcaaaa ttcaaagaac tattgtatag attggatccg ttgtgtatcc      1320
     attttaaatt acggcaattt gacgtttacg gctgatgact acaattggat atctaagatg      1380
     tctgcggacg tggtaccctg ggcccacggt gatctatccg attgtaatgt tcatggtgac      1440
     gcttatttca cattgttaaa aaggatggta ggtttctcag cgagtactga atcagtacgc      1500
     gagatattac tagcaagcaa agatttagta tgtaaactaa cacctgttgc gcgaggagtt      1560
     ctgacgttta taatatcgag gaaagcgtga gtaccatcca tggggtatta aagctcaatg      1620
     gtttcgttat agccttggag acaaggtata gtggtgttca atgat                      1665
//