ID GU350423; SV 1; linear; genomic RNA; STD; VRL; 3180 BP. XX AC GU350423; XX DT 28-SEP-2010 (Rel. 106, Created) DT 28-SEP-2010 (Rel. 106, Last updated, Version 1) XX DE Homalodisca vitripennis reovirus isolate Riverside segment 3, complete DE sequence. XX KW . XX OS Homalodisca vitripennis reovirus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus; OC unclassified Phytoreovirus. XX RN [1] RP 1-3180 RX DOI; 10.1016/j.virol.2010.08.002. RX PUBMED; 20739043. RA Stenger D.C., Sisterson M.S., French R.; RT "Population genetics of Homalodisca vitripennis reovirus validates timing RT and limited introduction to California of its invasive insect host, the RT glassy-winged sharpshooter"; RL Virology 407(1):53-59(2010). XX RN [2] RP 1-3180 RA Stenger D.C.; RT ; RL Submitted (22-DEC-2009) to the INSDC. RL USDA-ARS, 9611 S. Riverbend Ave., Parlier, CA 93648, USA XX DR MD5; 076d7dba6749b8c308c166c5ad87c1d8. XX CC GenBank Accession Numbers GU350421-GU350432 represent the complete CC genome of Homalodisca vitripennis reovirus Riverside isolate. XX FH Key Location/Qualifiers FH FT source 1..3180 FT /organism="Homalodisca vitripennis reovirus" FT /segment="3" FT /host="Homalodisca vitripennis" FT /isolate="Riverside" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="2008" FT /db_xref="taxon:411854" FT CDS 33..3098 FT /codon_start=1 FT /product="major core protein" FT /db_xref="GOA:E2E1Q8" FT /db_xref="InterPro:IPR015312" FT /db_xref="InterPro:IPR016029" FT /db_xref="UniProtKB/TrEMBL:E2E1Q8" FT /protein_id="ADN64794.1" FT /translation="MDLTGTALGGAGDVKSVLLTESSSHFTPVEVYNISEDLKTVKITA FT VIADKSTVSRVPLPVSFVSAKDVERVFKIIPLRIGSTSMIIDTPRVVFLLMYNESIYDD FT FMQIKNVPAFEPSVTMHRVEAVFSLMQKYCCSMLDGVPTYSTTVADIPVKAVTMSEFGD FT RDMDELANYLNTEYEILSAQAQNRALYVRSAAIDVPFPFGDDLNNADVERKNNYHQYRV FT PFHSLELALYQLAGELLRTQYCHPTVALEFLRRRAPPFLTVEDSVAERMMRAGSGVLMP FT RPVMELLDYTLVYRSPLALSRLATRLSSKISIKLHMRMVTEVQKTISDMLGVSSSTSTL FT STSSIQSLNLIGVENLTLYMARSLLNPNFAYAQISELTGLAFEDFVYGSCLLLIQAMLP FT PSAILASDRIMINNRLAYFLIRYIAMPATYDRLTANNVVPHYYNHDRWQITTVDYLVAI FT YTNLLAGERRLNEVIRLYFRGQVPVAVNAINIPAAQTAYKIDERQSISAPYLFGAPINA FT MAPDTRLLEFKNGLNLPPRSPILPTNIEGANVISLQNLMNKVDVINAIYLSGFGRETPS FT MWIRNASINTAYLTKLISDVSNLSAIYEAVLANTYANAINVYCDTEYHPEIPLNWKIPY FT TIKPKDFLFAVFGLIPMYQLSTEAVPDFFAGSEDILILQLIQAVYRMLGQRLGADPTQY FT FHLEEVLSSVSRIVSILTHTSVDVKIYFTDSPHSLTFNKPIWDRFIRRVEQAQLPPLYD FT IIFQQISNVYTLLQGMQDLLPICDYFYIARNCGWVARGSSESIIAATSIYSNQAVVQSE FT INSFTDACNLRLRARRVDNVSLTTDLDDMFYNLSSISSDEFVRSDARGRTQLRVAAVPV FT IKVNMRARYVLNIRTEDGNMLRKPEIKKMMYSDFIDFLMKHQKEPHAPIIEIPITIGLN FT NIGATTSTAIRSDSKTVDEYFKAYLGAQVVIPMDAIVIEQLGSFDELRNKLSNNVVTRD FT KTWEIWNDVEASYVPIGNHPVQLDPIGHPAEI" XX SQ Sequence 3180 BP; 1008 A; 565 C; 681 G; 926 T; 0 other; ggcagatctt gactatcgta tttacggcta ggatggattt gactggtacc gccttgggcg 60 gtgcaggtga tgtaaagagt gttctattaa cagaatcctc gtctcatttt actccagttg 120 aagtatataa tatatctgaa gatttaaaga ctgttaaaat aacagctgtg atagcggata 180 aatcaacagt ctcgcgtgtt ccactaccag tatcattcgt aagcgctaaa gatgttgaac 240 gtgtgtttaa gattattcca ttacgtattg gatcaacttc aatgattatt gacacaccac 300 gtgtggtgtt tttattaatg tacaatgagt caatatatga tgacttcatg caaattaaaa 360 atgtgccagc atttgaacca agcgttacaa tgcatagagt agaggctgta ttctcgttaa 420 tgcaaaaata ttgttgcagt atgttagatg gagttccaac atactctacc actgtcgcgg 480 acatcccagt gaaggcagtc acgatgtctg agttcggtga tagagatatg gatgaattag 540 caaattattt aaatactgaa tatgaaatat tatcggcgca ggctcaaaat agagccttat 600 atgtgaggtc ggcggcaata gacgttccat ttcctttcgg ggatgatttg aataatgccg 660 acgtagaacg gaaaaacaat tatcatcaat atcgggtacc attccacagc cttgaacttg 720 cattgtatca attagctggt gaattgttga ggacacagta ttgtcacccg acggttgcgc 780 ttgaattttt aaggcgtcgg gccccgccat tcttgaccgt agaggactca gttgctgaac 840 ggatgatgcg tgcaggatcc ggggtattaa tgccgagacc agtcatggaa ttgcttgact 900 atacgctggt ctatagatca ccactggcgt tgtcacgtct ggcgactagg ttaagttcga 960 agatttcgat aaagttacac atgcgtatgg taaccgaagt acaaaaaaca atttcagaca 1020 tgcttggagt ttcaagtagt acatcgacgt tatcgacttc atctatacaa agtctgaatc 1080 tgattggagt cgagaatttg actttatata tggcacggtc attattaaat ccgaattttg 1140 catacgctca aataagcgaa ttaactggtt tggcgtttga agatttcgta tatggatctt 1200 gtttgttact tatccaagcg atgcttccac catctgcgat attggcatct gataggataa 1260 tgataaataa taggcttgca tattttctaa tccgttacat agcaatgcca gccacatatg 1320 atagattgac ggctaataat gtggtgcccc actattataa tcacgacaga tggcaaataa 1380 caacagtaga ttatttagtg gctatataca ctaatctact tgcaggagag aggagactaa 1440 atgaagtaat aaggctctat ttccggggtc aagtaccagt agccgttaat gcaataaata 1500 tacctgctgc tcaaacagct tataagatag atgaaaggca aagtatatct gctccatatt 1560 tgttcggagc tccaatcaac gccatggctc cagacacgag actgttagag ttcaaaaatg 1620 gattaaattt accgcctaga tccccaattc tgccaacgaa cattgaaggt gcgaacgtta 1680 taagtttgca gaatttaatg aataaagttg acgttattaa cgccatatat ctaagtggct 1740 ttggaagaga aacgccatca atgtggatca gaaatgcatc aataaatact gcatacttaa 1800 ctaaactaat atctgatgtt agtaacttga gcgcaatata tgaagcggtg ctagcaaaca 1860 cttacgccaa tgcgataaat gtgtattgcg atacggaata ccaccctgag attccgttaa 1920 attggaaaat tccatacact attaagccga aagacttctt gtttgcagta tttggactaa 1980 taccaatgta tcaattgagt actgaggcag ttcctgattt tttcgcagga agtgaggaca 2040 tactaatact gcaactaata caggctgttt atagaatgtt gggtcaacga ttaggcgctg 2100 acccaactca atattttcat ctggaagaag tattgagttc tgtatctaga attgtgtcta 2160 tattgacaca tacctcagtg gatgtaaaaa tatattttac tgattcgccg cattcattga 2220 cattcaacaa acctatatgg gatagattta ttaggcgggt agaacaagca caactaccgc 2280 cactatatga tataattttc cagcaaatta gcaatgtgta tacattatta caaggtatgc 2340 aggatctgtt acctatatgc gattactttt atatagcgcg taattgcgga tgggtagcta 2400 gaggatcgag tgaatcaata atagcggcta cgtctatata ctctaaccaa gcggtagtgc 2460 agagtgaaat aaactcattt acagatgcat gtaacttaag attacgtgct cgcagggtgg 2520 acaatgtatc attaacgacg gatttagatg atatgtttta taatttatca tctataagtt 2580 cagatgaatt tgtaagatct gacgcacgcg gcaggacaca gttacgtgta gcggcagttc 2640 cagtaattaa agtaaatatg cgagcgcgtt acgtgctaaa cattcggact gaagatggaa 2700 acatgcttag aaagcccgag attaaaaaga tgatgtatag cgacttcatt gactttctaa 2760 tgaagcatca aaaagagcca catgctccaa ttatcgaaat acctataact attggattaa 2820 ataatattgg agccacaacg agtacggcta taagaagtga cagtaaaact gtagatgaat 2880 attttaaagc ttacctagga gctcaagttg tgattccaat ggatgcaata gtcatagagc 2940 agttaggatc atttgatgag ctgaggaata aactttccaa caatgtggta acacgcgata 3000 agacatggga gatttggaac gatgtagaag catcttatgt tccaatcgga aatcatccag 3060 ttcagttgga tccaatcggt catcctgcag aaatctagtg cgttatcaga atgatccaaa 3120 gagtgtccgg ggaactcgcc tagttgacgc ttgcggttat ggtagttaaa gatatatgat 3180 //