ID GU326337; SV 2; linear; genomic RNA; STD; VRL; 3699 BP. XX AC GU326337; XX DT 27-JAN-2010 (Rel. 103, Created) DT 07-APR-2010 (Rel. 104, Last updated, Version 2) XX DE Olive latent virus 1 isolate CM1, complete genome. XX KW . XX OS Olive latent virus 1 OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Alphanecrovirus. XX RN [1] RP 1-3699 RA Hasiow-Jaroszewska B., Borodynko N., Pospieszny H.; RT "Complete nucleotide sequence of Olive latent virus 1 isolated from RT tomato"; RL Unpublished. XX RN [2] RP 1-3699 RA Hasiow-Jaroszewska B., Borodynko N., Pospieszny H.; RT "Identification and characterization of Olive latent virus 1 from new host, RT Solanum lycopersicum"; RL Unpublished. XX RN [3] RP 1-3699 RA Hasiow-Jaroszewska B., Borodynko N., Pospieszny H.; RT ; RL Submitted (17-DEC-2009) to the INSDC. RL Virology and Bacteriology, Institute of Plant Protection, National Research RL Institute, Wegorka 20, Poznan 60-318, Poland XX RN [4] RC Sequence update by submitter RP 1-3699 RA Hasiow-Jaroszewska B., Borodynko N., Pospieszny H.; RT ; RL Submitted (18-MAR-2010) to the INSDC. RL Virology and Bacteriology, Institute of Plant Protection, National Research RL Institute, Wegorka 20, Poznan 60-318, Poland XX DR MD5; 7050fa5fc0ca06bf2f500ea22086ba07. XX CC On Apr 5, 2010 this sequence version replaced gi:284182835. XX FH Key Location/Qualifiers FH FT source 1..3699 FT /organism="Olive latent virus 1" FT /host="Solanum lycopersicum (tomato)" FT /isolate="CM1" FT /mol_type="genomic RNA" FT /country="Poland" FT /db_xref="taxon:47669" FT CDS 61..669 FT /codon_start=1 FT /product="RdRp/p23" FT /db_xref="GOA:D5JGI8" FT /db_xref="InterPro:IPR013707" FT /db_xref="UniProtKB/TrEMBL:D5JGI8" FT /protein_id="ADE48189.1" FT /translation="MELPNQHKQTAAEGFVSFLNWLCNPWRRQRTVNAAVAFQNSVLAI FT EDVEHFEDINECFEESSGGQSQRTKIVAEGAYSPVKSERTRRVRKQKKAKFVKYLVNEA FT RAEFGLPKATEANRLMVQHFLLRRCKDWGVVTSQCHNNVALALTLVFIPTEDDLLARAM FT MNTYKTKSAVRGMDNLQGEGWWNNRLGIGGQVGLAFRAK" FT CDS 838..2235 FT /codon_start=1 FT /product="RdRp/p52" FT /db_xref="GOA:D5JGI9" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:D5JGI9" FT /protein_id="ADE48190.1" FT /translation="MRRGLMERVFYVEGPNGLQDAPKPVRGAFNSLNKFRDLYTKNSWR FT HSPVTNEQFLMNYSGRKLTIYKEAVDSLSHQPLSLRDSRLKTFVKAEKLNLSKKPDPAP FT RVIQPRSPRYNVCLGRYLRHYEHHAFKTIAKCFGEITVFKGFTLEQQGEIMSSKWKKYV FT NPVAVGLDASRFDQHLSVEALQYEHEFYIRDYPNDKQLKWLVNQKLSNIGTAFASDGII FT KYRKEGCRMSGDMNTSLGNCILMCAMVYGLKEHLGINLSLANNGDDCVIVCEKADLKKL FT TSSIEPYFRQFGFKMEVEQPVDIFERIEFCQTQPVFDGYQYIMVRKPSVVTSKDVTSLI FT PCQNQAQYAEWLQAVGECGMSINGGIPVMQNFYHMLQTGVKRTKFTKTGEFQTNGLGYH FT SRYMHRVARAISPETRLSFYLAFGITPDLQEALEVFYDTHTLELDDVVPVDTYQVSGEH FT LINGLPN" FT CDS 2219..2440 FT /codon_start=1 FT /product="p8" FT /db_xref="UniProtKB/TrEMBL:Q38RA9" FT /protein_id="ADE48191.1" FT /translation="MDYQTEVSEDNVSVRGRARRGTEDKKHNGSGLTGVKRHAVSETSQ FT KSQQGTGNGTMTNIAEEQTITVTYNFNF" FT CDS 2443..2613 FT /codon_start=1 FT /product="p6" FT /db_xref="GOA:Q83941" FT /db_xref="UniProtKB/TrEMBL:Q83941" FT /protein_id="ADE48192.1" FT /translation="MAVCRCCDTSPGITLFPYFAILILILAILVVGTPNQQYHHSPSTY FT EYKTQHISIAK" FT CDS 2635..3447 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:D3JXK6" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D3JXK6" FT /protein_id="ADB82659.1" FT /translation="MVNYYWDSRIQRWFYESGPQRVRTYMKADFTPPNGKLPARKTKRS FT PPNRGNLQVLPVAVPTAGGVVSTRRRVPRITTTNEQTVVRNTEVISAINSAALGAFSAN FT TVTVIPTNLSWLAGLSHLYSKYRWRKLRFIYIPICPTSTQGHVSMSLSFDRIDVQPTSI FT IQMQQGYRAITFPPYAGYDGAMALSSFGNIPGMVVVDVDCARMDKLWYPNVTLSTFLAM FT APTSRTDTCGVTLFTASDQGPAAATNFGQVFCQYEIEFIEPVNPTVNV" XX SQ Sequence 3699 BP; 1013 A; 891 C; 897 G; 898 T; 0 other; tagtatacat accaagtata cgatatcggt gcaagcccgt acacagctaa agtgtctaaa 60 atggagttac ccaaccaaca taagcaaaca gctgctgaag gtttcgtttc tttccttaac 120 tggctttgta acccctggag acgccaacgt acagtcaacg ctgctgtcgc ctttcagaat 180 agcgtccttg ctattgagga cgtagaacac ttcgaagata tcaacgagtg ttttgaggaa 240 tcttctggag gccaatcgca gcgcactaag attgtcgctg aaggggctta ctctcccgta 300 aaatccgaac gcacccgccg agtccgcaag caaaagaagg ccaaattcgt caaatatttg 360 gttaatgagg ctcgtgccga gtttggtctc cccaaagcca cagaggccaa tcgactcatg 420 gtgcaacact tcctgctccg aaggtgtaag gattgggggg ttgtcacatc ccagtgccac 480 aacaatgttg cactcgcctt aactctcgtg ttcatcccaa cagaagatga tttgctggcg 540 cgagctatga tgaacacgta taagacgaag tctgcggtcc gtgggatgga caacctccaa 600 ggtgaggggt ggtggaacaa caggcttggc ataggtggcc aggtcggctt ggcctttcgg 660 gccaagtagg ggtgcctaga gaggaggccg gggttttcca cgtctgtttc gcgtggaaat 720 caccccgatc tggtggtcaa accatcagga caccccgaga aacagcgtca gttgttacgc 780 tatagtggaa ttggcggcca tttattattc ggcatccaca acaactctct ttccaatttg 840 cgtaggggcc taatggagag agtattctac gtcgaaggac ccaatgggct ccaagacgcc 900 cctaaacccg ttcggggagc attcaactcc ctgaataagt ttcgagacct atataccaaa 960 aatagttggc gtcattcccc tgtaaccaat gaacaattct tgatgaatta ctcgggcagg 1020 aaactgacta tttacaaaga agcggttgat agtttgtcgc atcaaccact tagcttacgg 1080 gactcgaggc tgaagacgtt cgttaaggcc gaaaaactca atctgagcaa aaagccagat 1140 ccagcacccc gggtcatcca acccaggtca cctcggtaca acgtttgttt gggtcgttat 1200 ctacgtcact atgaacacca cgcgttcaaa accattgcta aatgctttgg ggagatcacg 1260 gtctttaaag ggtttactct agagcaacaa ggcgaaatta tgtcctcgaa gtggaagaaa 1320 tatgttaatc ccgtcgccgt tggactcgac gcgagtcggt tcgaccaaca cctgtcagtt 1380 gaagcacttc aatatgagca tgaattttac attagagatt acccgaatga taaacagcta 1440 aaatggttgg taaaccaaaa actgagcaat attggcacag cgtttgctag tgatggcatc 1500 ataaagtata ggaaggaggg ttgtcgtatg agtggagata tgaacaccag tttgggcaat 1560 tgcattctca tgtgtgcgat ggtctacggg ttgaaggaac acctaggcat aaatttatcc 1620 cttgccaaca atggggatga ctgcgtcatt gtctgtgaga aagcggactt gaagaaattg 1680 acaagcagca tcgaaccata tttcaggcaa ttcggattca agatggaggt ggaacaaccc 1740 gtggacatat tcgagcgcat tgagttttgt caaacccaac ctgtgttcga tggctaccaa 1800 tacatcatgg ttcgaaaacc ctcggtagtt acttctaagg atgtcactag cctaatccca 1860 tgccagaatc aggctcaata tgcagaatgg ctgcaagctg taggtgagtg cggaatgagt 1920 atcaatggtg gaatacctgt catgcagaac ttttaccata tgctccaaac tggagttaaa 1980 cgcaccaaat tcaccaagac cggcgagttt cagacgaacg ggttggggta ccactctaga 2040 tatatgcata gagtggcccg agccatttcg cccgaaaccc gtttatcctt ctatttagcg 2100 tttggtatca caccagacct ccaggaagca ctggaggtct tctatgatac ccatacgctt 2160 gagttggatg atgttgtccc agttgatacc taccaagtat caggagagca tttgatcaat 2220 ggattaccaa actgaggtta gtgaggataa cgtgagcgta cgcggtcggg ctaggagggg 2280 cactgaggat aagaagcaca acggatcggg gttaactggc gttaagcgtc atgcggtgag 2340 tgaaacatct cagaaatcac agcaaggtac tggtaacggc acaatgacta acatagctga 2400 agaacagacc attaccgtga catacaactt taacttttag ttatggctgt gtgtcgctgt 2460 tgtgatactt caccaggtat tacattattc ccttactttg ctattctcat tctcatcctt 2520 gcaatactcg ttgttggcac tccaaaccag caatatcatc attctcctag tacttacgag 2580 tataagactc aacacatttc gatcgcaaaa tagacatttc gcaactctct caacatggtt 2640 aattattact gggatagtcg aattcagaga tggttctacg aaagtggacc acagcgtgtc 2700 cgcacatata tgaaagcgga tttcacccca ccaaacggca aactgcctgc tcgcaagact 2760 aaaaggtcgc ccccaaatag gggcaaccta caagttcttc cggttgcagt accaaccgct 2820 ggtggagtgg tctccacaag aagacgcgtt cctcgaatta ctactactaa tgagcagact 2880 gtcgtgagaa acacagaagt cataagtgcc attaactctg ccgctttagg tgcattttcg 2940 gcaaacactg ttacggtaat cccgaccaat ctctcatggt tggcaggttt atcccatttg 3000 tacagcaagt accgttggcg caagctccgg tttatctata ttccgatctg cccaaccagc 3060 acacaaggcc atgtttctat gtcactatca ttcgacagaa tcgatgtgca gccaacaagc 3120 atcattcaga tgcaacaggg ctaccgtgcc atcactttcc cgccttacgc ggggtatgat 3180 ggtgccatgg ccttgtcgtc attcggcaac attcctggaa tggttgtcgt ggacgtagac 3240 tgcgcacgaa tggacaagtt gtggtaccct aatgtcacct tgtccacctt tctggccatg 3300 gcaccaacat ccagaacgga tacctgcgga gtgaccttgt tcactgcaag tgatcaaggg 3360 ccagccgctg ccaccaactt tggccaagtg ttctgccagt acgaaataga atttatagaa 3420 ccagtgaacc caactgtcaa tgtgtaacca cacaacgatg ggtgagttac gtaactgtgc 3480 taatccctaa aggttttagt agagcggtaa gcaagccgga tcctgggaga caggtttaac 3540 gggctggggg tggtgccccg gccgtcgcat cacttgctga tacaatctac aaggcccatg 3600 ggagggtctg cacaggtatc cacgccaagg acgggacgaa agtctcggac ggggggtagt 3660 ggacccaaca ccaaattgag gggctcttgc cccacccca 3699 //