ID   GU191840; SV 1; linear; genomic RNA; STD; VRL; 1295 BP.
XX
AC   GU191840;
XX
DT   16-DEC-2009 (Rel. 103, Created)
DT   16-DEC-2009 (Rel. 103, Last updated, Version 1)
XX
DE   Cowpea mild mottle virus isolate CpMMV-PR coat protein and 11 kDa putative
DE   nucleic acid binding protein genes, complete cds.
XX
KW   .
XX
OS   Cowpea mild mottle virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-1295
RA   Jordan R., Heuchelin S., Viteri D., Lamborn J.;
RT   "Firt Report of Cowpea mild mottle virus in Cowpea in Puerto Rico";
RL   Unpublished.
XX
RN   [2]
RP   1-1295
RA   Jordan R.;
RT   ;
RL   Submitted (10-NOV-2009) to the INSDC.
RL   Floral & Nursery Plants Research Unit, US National Arboretum, USDA-ARS,
RL   10300 Baltimore Ave, Beltsville, MD 20705, USA
XX
DR   MD5; 6868d7540318cd41e7f24b535c076848.
DR   EuropePMC; PMC3528291; 23242372.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1295
FT                   /organism="Cowpea mild mottle virus"
FT                   /host="cowpea"
FT                   /isolate="CpMMV-PR"
FT                   /mol_type="genomic RNA"
FT                   /country="Puerto Rico"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:67761"
FT   CDS             1..867
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF5"
FT                   /db_xref="GOA:D2K9J2"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:D2K9J2"
FT                   /protein_id="ACZ71185.1"
FT                   /translation="MESVFDLSNLLDSEMADKTKTGVPKAADGTALPDIDAELQKRLDD
FT                   LRAFLRKTQSASEITNPGFELGRPALKESTFNSDKHTHIYGKWSIDQLSRIVPKKISNN
FT                   MATAEEMAKVQITLEGLGVPTEHVAEVLLQVAIYCKDVSSSSFMDSSGTFDWKGGSILS
FT                   DSVIAALRKDDNTLRRVCRLYAPITWNFMLTHKAPPSDWAAMGFKYSDRFAAFDCFEYV
FT                   ENPAAIQPAEGLIRKPTPSEKIAHNTYKRLALDRSNRNELYANLNTEVTGGTLGPEISR
FT                   NFNHAKK"
FT   CDS             870..1211
FT                   /codon_start=1
FT                   /product="11 kDa putative nucleic acid binding protein"
FT                   /note="ORF6"
FT                   /db_xref="GOA:D2K9J3"
FT                   /db_xref="InterPro:IPR002568"
FT                   /db_xref="UniProtKB/TrEMBL:D2K9J3"
FT                   /protein_id="ACZ71186.1"
FT                   /translation="MISCKLIAIHVSLVSRKLGYVLPFELCVLISLKAGPTRLGIGRSS
FT                   YARKRRAKIIGRCHLCYRVNPKFYFTKRCNGVDCKPGLNYPSWVEDFIRYGVYTKGSNC
FT                   GDTPQILNS"
FT   3'UTR           1212..>1295
XX
SQ   Sequence 1295 BP; 363 A; 236 C; 316 G; 380 T; 0 other;
     atggagtctg tatttgattt gagtaacttg ttggatagtg agatggctga taaaacaaaa        60
     actggcgttc caaaagctgc tgatggaaca gctcttccag acattgatgc tgaattgcaa       120
     aagaggttgg atgatttgag ggctttctta agaaaaactc agagtgcatc tgagataacc       180
     aaccctggtt ttgaacttgg tagacctgca ttgaaagagt ccactttcaa ttctgacaag       240
     cacactcata tttatgggaa gtggtcaatt gatcagctca gccggatagt tcccaagaaa       300
     atatctaata atatggcaac agctgaggaa atggctaaag ttcagattac tctagagggt       360
     ttgggagtgc caacggagca tgtggctgag gttctcttac aagttgcaat ctattgcaag       420
     gatgtcagtt cctcaagctt catggattct agcggcacct ttgattggaa aggtggctcc       480
     attttgtctg attcagtgat tgccgctttg aggaaagacg ataataccct tcgtagggta       540
     tgtcgattgt atgccccaat tacatggaat ttcatgttga ctcacaaagc tccaccttct       600
     gattgggctg ccatgggttt caaatactct gatcgatttg ctgcatttga ttgttttgag       660
     tatgtggaga accctgctgc tattcaacct gctgaggggt tgataaggaa gcctacacct       720
     agtgagaaaa ttgctcacaa cacatacaaa aggttagctt tggacaggtc aaacagaaac       780
     gagctgtatg ctaacttgaa tactgaagtg actggaggta ctctagggcc tgaaatatct       840
     cgcaacttca atcacgccaa gaagtaaaga tgataagttg taagttgatc gccattcacg       900
     tttcccttgt gagtaggaag ctagggtatg tgttgccgtt tgaattgtgt gtattaataa       960
     gccttaaggc cggtcccact cgtttgggaa ttggtcgctc ttcctatgct aggaagagaa      1020
     gggcaaagat aattgggcgt tgtcatctgt gttacagagt aaaccccaag ttttacttta      1080
     ccaagcgttg taatggtgtg gattgtaaac ctggtttgaa ttacccgagt tgggttgaag      1140
     attttatacg ctacggcgtg tacactaagg ggagtaactg cggtgatacc cctcaaatat      1200
     taaactcttg aaccaaggaa agagtataaa gagtccttgt gcatcttcag acctaactgt      1260
     tgagatgaga accggtttta atgttatttt cctgg                                 1295
//