ID   GQ478668; SV 1; linear; mRNA; STD; VRL; 1240 BP.
XX
AC   GQ478668;
XX
DT   30-NOV-2009 (Rel. 103, Created)
DT   05-MAR-2010 (Rel. 104, Last updated, Version 2)
XX
DE   Alstroemeria necrotic streak virus nucleocapsid protein (N) mRNA, complete
DE   cds.
XX
KW   .
XX
OS   Alstroemeria necrotic streak virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Tospoviridae; unclassified Tospoviridae.
XX
RN   [1]
RP   1-1240
RX   DOI; 10.1007/s00705-010-0590-7.
RX   PUBMED; 20151164.
RA   Hassani-Mehraban A., Botermans M., Verhoeven J.T., Meekes E., Saaijer J.,
RA   Peters D., Goldbach R., Kormelink R.;
RT   "A distinct tospovirus causing necrotic streak on Alstroemeria sp. in
RT   Colombia";
RL   Arch. Virol. 155(3):423-428(2010).
XX
RN   [2]
RP   1-1240
RA   Hassani-Mehraban A., Botermans M., Verhoeven K., Saaijer J., Peters D.,
RA   Goldbach R., Kormelink R.;
RT   ;
RL   Submitted (14-AUG-2009) to the INSDC.
RL   Laboratory of Virology, Department of Plant Sciences, Wageningen
RL   University, Droevendaalsesteeg 1, Wageningen 6708 PB, The Netherlands
XX
DR   MD5; ec33d8ce668afd2c7099bbacee1a386b.
DR   EuropePMC; PMC2828552; 20151164.
DR   EuropePMC; PMC3371012; 22715400.
DR   EuropePMC; PMC4263035; 25465801.
DR   EuropePMC; PMC4326804; 25540203.
DR   EuropePMC; PMC5234141; 28081705.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1240
FT                   /organism="Alstroemeria necrotic streak virus"
FT                   /host="Alstroemeria sp."
FT                   /mol_type="mRNA"
FT                   /country="Colombia"
FT                   /isolation_source="leaf"
FT                   /collection_date="20-Oct-2008"
FT                   /db_xref="taxon:693450"
FT   gene            1..1240
FT                   /gene="N"
FT   CDS             153..929
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:D1L612"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:D1L612"
FT                   /protein_id="ACZ18222.1"
FT                   /translation="MSKAKLTRENIINLLTQSAEVEFEEEQNQAAFNFQNFCQDNLDLV
FT                   KKMSITSCLTFLKNRQSIMKVIKQSDFTFGRITIKKTSERIGATDMTFRRLDSMIRVKL
FT                   IQETANAVNLDAIKTKIASHPLVQAYGLPLNDAKSVRLAIMLGGSIPLIASVDSFEMIS
FT                   VVLAIYQDAKCKDLGINPKKYDTKEALGKVCTVLKSKGFSMDDTQVTKGREYAAILGSC
FT                   NPNAKGSVAMEHYSEHLNKFYEMFGVKKESKISGVA"
XX
SQ   Sequence 1240 BP; 410 A; 192 C; 211 G; 427 T; 0 other;
     agagcaattg tgtcaatttt attcaaaaaa tcaatactca atcttacaaa tctctcacat        60
     tagaaggata agaagttaac gcgggataca gagttgcact ttcttaccct gaattatatc       120
     tattcaagca caccaaatcc tctatattca tcatgtctaa ggctaagttg acaagggaaa       180
     acatcattaa cttgctgaca caatctgcag aggttgaatt tgaggaagag cagaatcagg       240
     ctgcatttaa tttccaaaat ttctgtcaag acaatcttga cctggtcaag aagatgagca       300
     taacctcatg cttgacattt ctgaagaacc gtcagagtat aatgaaggtg atcaaacaga       360
     gtgattttac ctttggtaga ataactatca aaaagacttc tgaaagaatt ggagctacgg       420
     atatgacttt tagaaggctc gatagcatga taagagtcaa gcttattcaa gaaactgcta       480
     acgctgttaa cttagatgct atcaaaacaa aaattgcttc tcatcctctg gttcaggctt       540
     atggacttcc tttgaatgat gctaaatcag tgagacttgc aataatgctt ggaggtagca       600
     ttcctcttat agcttctgtt gatagctttg agatgattag tgttgttctg gctatatacc       660
     aggatgcaaa gtgcaaagac cttggaatca acccaaaaaa gtatgatact aaagaagctt       720
     taggaaaagt atgcactgtt ctgaaaagca aaggcttctc gatggatgat acacaggtaa       780
     caaaaggaag ggagtatgct gccatactcg gctcttgcaa tcctaatgct aaaggaagcg       840
     ttgccatgga acactacagt gagcatctca acaagttcta tgaaatgttt ggtgttaaga       900
     aagaatccaa aatttcaggt gttgcttaat caacggtatt tttcgtaata ttttggtata       960
     aattacaaat aaaagagaaa caataacgaa cgatcataat tcacacattt tcaaagatat      1020
     tcacacgaat taagtcaaga tataaaagtc ccaaacagtt ttattattat tttattactt      1080
     ttagtttatt tttattatta tttattaata tttatatttc acactatatg tatatacaca      1140
     ctttgttact tttagtttat ttttgtttgt tttattttat ttattttatt tattttattt      1200
     tattttattt tgtttttgtt ttgttttttg tttttgtttt                            1240
//