ID   GQ475410; SV 1; linear; genomic RNA; STD; VRL; 771 BP.
XX
AC   GQ475410;
XX
DT   13-SEP-2010 (Rel. 106, Created)
DT   15-FEB-2013 (Rel. 115, Last updated, Version 5)
XX
DE   Onion yellow dwarf virus isolate 558-OYDV2 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-771
RA   Parrano L., Afunian M., Pagliaccia D., Douhan G., Vidalakis G.;
RT   "Characterization of viruses associated with garlic plants propagated from
RT   different reproductive tissues from Italy and other geographic regions";
RL   Phytopathol. Mediterr. 51(3):549-565(2012).
XX
RN   [2]
RP   1-771
RA   Afunian M.R., Parrano L., Pagliaccia D., Vidalakis G.;
RT   ;
RL   Submitted (13-AUG-2009) to the INSDC.
RL   Plant Pathology and Microbiology, University of California, 900 University
RL   Ave, Riverside, CA 92521, USA
XX
DR   MD5; 4da551e26047d3b03ce7397344b877c8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..771
FT                   /organism="Onion yellow dwarf virus"
FT                   /host="Allium sativum (garlic)"
FT                   /isolate="558-OYDV2"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy"
FT                   /collection_date="2008"
FT                   /PCR_primers="fwd_seq: gcgggggaaggagaagatgcag, rev_seq:
FT                   aaccgtatcgttcgccacaactag"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..>771
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains coat protein"
FT                   /db_xref="GOA:E0X566"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:E0X566"
FT                   /protein_id="ADM89594.1"
FT                   /translation="AGEGEDAALKASTLKQIAKQKDKDVDTGTTGKFTIPRIKALSDKM
FT                   RFPKVGKTVVLNAEHLLEYKPDQIELYNTRSTKNQFENWYNAVKKEYDVNDEQMKILLN
FT                   GLMVWCIENGTSPNLSGNWTMMDDEEQVEYPLAPVLDNAKPTFRQIMAHFSDAAEAYIE
FT                   YRNATEKYMPRYGLQRNLTELSLARYAFDFYEMTSKTPKRAKEAHMQMKAAAIRGATNR
FT                   LFGLGGNVNTTEEDTERHTAADVNKNQHTLLGIRV"
XX
SQ   Sequence 771 BP; 280 A; 134 C; 181 G; 176 T; 0 other;
     gcgggggaag gagaagatgc agcattaaag gcaagcacac taaagcaaat tgcaaagcag        60
     aaagataaag atgttgacac tggtacaact ggtaagttca caatccctag aattaaagct       120
     ctatcagata aaatgaggtt tccaaaagtt ggcaaaactg ttgtacttaa tgcagagcac       180
     ttgttggaat acaagccaga tcaaatcgaa ctgtacaaca caagatcaac aaagaatcag       240
     tttgagaatt ggtataatgc ggttaagaaa gagtacgatg tcaatgacga gcaaatgaaa       300
     atattactaa atggtctaat ggtttggtgt attgaaaatg gaacatctcc taatttatcg       360
     ggaaactgga ctatgatgga tgatgaagag caggttgaat atccattggc gccagttctg       420
     gataacgcaa aaccaacctt tagacaaata atggcacatt tcagtgatgc agctgaagca       480
     tacattgaat atagaaatgc cacagaaaaa tacatgcccc ggtatggact tcagcgcaat       540
     ttaacagaac ttagtttggc acgttacgca ttcgattttt atgagatgac ttctaaaact       600
     cctaaacgag caaaagaagc acatatgcag atgaaggcgg ctgcgattag aggggcaact       660
     aaccgcttgt ttggcctggg tggtaacgta aacacaacgg aagaggacac ggaaagacac       720
     acagctgcgg atgttaacaa gaaccagcac acgttgcttg gtataagggt g                771
//