ID   GQ475393; SV 1; linear; genomic RNA; STD; VRL; 771 BP.
XX
AC   GQ475393;
XX
DT   13-SEP-2010 (Rel. 106, Created)
DT   15-FEB-2013 (Rel. 115, Last updated, Version 5)
XX
DE   Onion yellow dwarf virus isolate 538-OYDV2 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-771
RA   Parrano L., Afunian M., Pagliaccia D., Douhan G., Vidalakis G.;
RT   "Characterization of viruses associated with garlic plants propagated from
RT   different reproductive tissues from Italy and other geographic regions";
RL   Phytopathol. Mediterr. 51(3):549-565(2012).
XX
RN   [2]
RP   1-771
RA   Afunian M.R., Parrano L., Pagliaccia D., Vidalakis G.;
RT   ;
RL   Submitted (13-AUG-2009) to the INSDC.
RL   Plant Pathology and Microbiology, University of California, 900 University
RL   Ave, Riverside, CA 92521, USA
XX
DR   MD5; 26dad6ce19793e083def9c9522ff2d00.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..771
FT                   /organism="Onion yellow dwarf virus"
FT                   /host="Allium sativum (garlic)"
FT                   /isolate="538-OYDV2"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy"
FT                   /collection_date="2008"
FT                   /PCR_primers="fwd_seq: gcgggggaaggagaagatgcag, rev_seq:
FT                   aaccgtatcgttcgccacaactag"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..>771
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains coat protein"
FT                   /db_xref="GOA:E0X554"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:E0X554"
FT                   /protein_id="ADM89582.1"
FT                   /translation="AGEGEDAAAQSNTPKQITKQKDKDVDTGTTGKFTIPRIKALSDKM
FT                   RFPKVGKIVVLNAEHLLEYKPDQIELYNTRSTKNQFENWYNAVKKEYDVNDEQMKILLN
FT                   GLMVWCIENGTSPNLSGNWTMMDDEEQVEYPLAPVLDNAKPTFRQIMAHFSDAAEAYIE
FT                   YRNATEKYMPRYGLQRNITELSLARYAFDFYEMTSKTPKRAKEAHMQMKAAAIRGATNR
FT                   LFGLDGNVNTTEEDTEGHTAADVNKNQPTLLGIRM"
XX
SQ   Sequence 771 BP; 282 A; 135 C; 179 G; 175 T; 0 other;
     gctggagagg gggaagacgc agcagcacaa tcaaacacac caaagcaaat cacaaagcag        60
     aaagataaag atgttgacac tggtacaact ggtaagttca caattcctag aattaaagct       120
     ctatcagata aaatgaggtt tccaaaagtt ggcaaaatag ttgtacttaa tgcagagcac       180
     ttgttggaat acaagccaga ccaaatcgaa ctgtataata caagatcaac aaagaatcag       240
     tttgaaaatt ggtataatgc ggtgaagaaa gagtacgatg tcaatgatga gcaaatgaaa       300
     atattgctaa atggtttaat ggtttggtgt attgaaaatg gaacatctcc caatttatcg       360
     ggaaactgga ctatgatgga cgatgaagag caggttgaat atccattggc gccagttctg       420
     gataacgcaa aaccaacttt tagacaaata atggcacatt tcagtgatgc agctgaagca       480
     tacattgaat atagaaatgc cacagaaaaa tacatgcccc ggtatggact tcagcgcaat       540
     ataacagaac ttagtttggc acgttacgca ttcgattttt atgagatgac ttctaagact       600
     cctaaacgag cgaaagaagc acatatgcaa atgaaggcgg ctgcgattag aggggcaact       660
     aatcgcttgt ttggcctgga tggtaacgta aacacaacgg aagaggacac ggaaggacac       720
     acagctgcgg atgttaacaa gaaccagccc acgttgcttg gtataaggat g                771
//