ID GQ370765; SV 1; linear; genomic RNA; STD; VRL; 3431 BP. XX AC GQ370765; XX DT 28-JAN-2011 (Rel. 107, Created) DT 28-JAN-2011 (Rel. 107, Last updated, Version 1) XX DE Watermelon bud necrosis virus isolate RG segment S, complete sequence. XX KW . XX OS Watermelon bud necrosis virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-3431 RA Laxmi Devi V., Usha Rani T.R., Jalali S., Krishnareddy M.; RT "Molecular Characterization of S RNA of Watermelon Bud Necrosis Virus RT Infecting Ridgegourd"; RL Unpublished. XX RN [2] RP 1-3431 RA Laxmi Devi V., Usha Rani T.R., Jalali S., Krishnareddy M.; RT ; RL Submitted (08-JUL-2009) to the INSDC. RL Division of Plant Pathology, Indian Institute of Horticultural Research, RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India XX DR MD5; c633b2925b0da86c4399de25e34317d1. XX FH Key Location/Qualifiers FH FT source 1..3431 FT /organism="Watermelon bud necrosis virus" FT /segment="S" FT /host="Luffa acutangula (ridgegourd)" FT /isolate="RG" FT /serotype="Nil" FT /mol_type="genomic RNA" FT /country="India:Betha, Bangalore North" FT /collected_by="M. Krishnareddy" FT /collection_date="Jul-2008" FT /note="serogroup: WSMoV" FT /db_xref="taxon:76052" FT 5'UTR 1..66 FT misc_feature 42..45 FT /note="potential N-glycosylation site" FT gene 67..1386 FT /gene="NSs" FT CDS 67..1386 FT /codon_start=1 FT /gene="NSs" FT /product="non-structural protein" FT /note="gene silencing supressor" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:E9JEC8" FT /protein_id="ADB19865.1" FT /translation="MSTALSVASEFVISYVTGDDVPPDDCCSIFSGEGANFLDLFMHNI FT AGMKSAFNISYLYLNDDITIHEPEDIESCHDYHYFEKFGLDITFCEHEMSLIVRKPGVK FT NTGCKFAMHNQTFNPNSDVLDLAPRTISEDIFYEKSKIRPSGMAPSGWCLDECRENNFY FT IAANGKLALDYGFSVMGKTTSYWRENMSREKILSVKQKSLPDNTVPTNRLLSTSTVKGI FT QLGSELASDTTVILSLKQNLNTNLKSQYPNSFHGIPEEGAFTRTFCVLFENKSRMICMY FT AKTVADNSNERTTIIIKVATKTVDFHLVIPIRNHINCMRKIGARIGLVDLCDADPNYNQ FT MIVKELLSVHTQFAIKLSEVIKKPIIVFKMYDKELTYSHVNVLGRILNYQTDIEGNVYF FT LSKTLEVLPKSLSTLSYLGSIAPTQWRECLEHRHFVVTAN" FT misc_feature 565..576 FT /gene="NSs" FT /note="potential N-glycosylation site" FT gene complement(2537..3364) FT /gene="N" FT CDS complement(2537..3364) FT /codon_start=1 FT /gene="N" FT /product="nucleocapsid protein" FT /note="NP" FT /db_xref="GOA:E9JEC9" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:E9JEC9" FT /protein_id="ADB19866.1" FT /translation="MSNVKQLTDKKIKDLLAGGAADIEIETEDATPGFSFKSFYDNNKD FT VEITFTTCLNILKCRKQIFTACKNGKYNFCGKNIVATTAQVGPDDWTFKRTEAFIRTKM FT VSMVEKSTNENAKQEMYTKIMELPLVAAYGLNVPAAYDSCALRMMLCIGGPLPLLSSVK FT GLAPVIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKGELDNMFKSAVEL FT LSKSNPGTASSISLKKYDDQVKYMDRVFNASLSMDDYGEHSKKSSKASTSLEV" FT misc_feature complement(3230..3241) FT /gene="N" FT /note="potential N-glycosylation site" FT 3'UTR 3416..3431 FT repeat_region 3422..3431 FT /rpt_type=INVERTED XX SQ Sequence 3431 BP; 1123 A; 587 C; 573 G; 1148 T; 0 other; agagcaatcg aggcttctaa taattctaga aaaacaacga taagatcaag aaatactaat 60 tcaggcatgt ctactgcgct gagtgttgct tctgagtttg tcataagtta tgtgacggga 120 gacgacgtac cacccgatga ttgctgttct attttctctg gagaaggcgc caactttctc 180 gatttgttca tgcataacat cgcgggcatg aaatctgcat tcaacatcag ctatttgtac 240 ttgaatgatg atatcacaat ccatgaacct gaggatattg agtcttgcca tgattatcat 300 tacttcgaaa aatttggtct agacattact ttttgcgagc atgagatgag tttgatcgta 360 aggaagcctg gtgtgaagaa cacaggctgc aaattcgcaa tgcataacca aaccttcaac 420 cctaactctg atgtattaga tttggcacca cgaacaattt cagaagacat cttttatgaa 480 aaaagtaaga taagacccag tggtatggct ccttccggct ggtgtttaga tgaatgccgg 540 gaaaataact tttacatagc tgctaacgga aaactggctc ttgattatgg tttctctgtc 600 atgggcaaaa caacatctta ttggagagaa aacatgtcaa gagagaagat cctgtcagtg 660 aagcagaaat ctcttcctga taacactgtt ccaaccaaca ggctgctgtc tacctcaaca 720 gtcaaaggaa ttcagctagg ttcggaactg gcatctgata ccacggtcat attgtctttg 780 aagcagaacc tgaacactaa cttgaaatca caatacccga attcattcca tggaatccca 840 gaagaaggag cttttacaag gactttctgt gtcctttttg aaaataaatc aaggatgatc 900 tgtatgtatg caaaaactgt tgcggataac agcaatgaga gaaccactat aataataaaa 960 gtggcgacaa aaactgttga ttttcatctt gttatcccca tcagaaacca catcaactgc 1020 atgaggaaga ttggagccag gataggtctt gttgatttgt gtgatgctga tcctaattat 1080 aatcaaatga ttgttaaaga attactatct gttcataccc agttcgctat taaattatct 1140 gaagtgatta aaaaacctat aatagtattt aaaatgtatg ataaagagtt gacctatagt 1200 catgtgaatg ttcttggaag aattttaaat taccaaacag atatagaagg gaatgtttat 1260 ttcctctcaa aaacccttga agttcttccc aaatcacttt caaccttaag ttatctgggg 1320 agtattgcac caacccagtg gagagaatgc ttggagcatc gacattttgt tgtaactgct 1380 aactgattta ctaaataact tagttccagc agatgattgc tatctttatg ttttataaat 1440 cattaagtct ttccttatca aaataatatt aagttttaag tttaatatat atttgaatat 1500 ttaaatgttt atcatagttt attagattaa agctattagt aataagttgt gtagcatgaa 1560 tatatttaat atgagtgtaa acctatgaaa gttaataaag aaaacccaaa aaaatcaaaa 1620 ataaaaaaga aaaaccaaaa aaatcaaaaa acaaaaaatc caaaaagacc tcgaaagggg 1680 caaacttggc ttttttattc caagtgattc taacctagtt ttaataacct tgtttatttg 1740 agctactgac ttgaagtgtc acaggtgcaa catgctgttc gagattattc aagattaaca 1800 aaagaaagtt ctgtccccat gtttgttagc taaagtaaac taacagacat aatcactaga 1860 tggtttagta caattagata tagcatgtcg atttatatag atctagattg ttattcattt 1920 tacatcacac ctaatatgct gatcataacc tatgcagatc cttagagttc taattaaaat 1980 gttcaaaata ccaacttttg ttcaaatttg agtctttcaa actggtttct aagaatatga 2040 tcagctttaa gctgctggat acatagaagt ttggttgttt tacatagctg atgctaatgt 2100 ctggtataca atatctgtaa atagtggcca ttatttgccc caaaagaggc tttttttggt 2160 ttttttggtt ttttgatttt tttggatttt atttgttttt tggttttttt ggatttttga 2220 attttgattt tatttatctt gtttatgtaa aatattctat ttatatattt atctttaaaa 2280 cacacattag cacactgaca taataaatag tttatatatt aaatttggtt taatattatt 2340 gaaaacacac gaataaacta ataacacaca cagacttttt aaataagact tttaataatt 2400 agtaatatat ttaacttaat attaatgtaa acacattaat aaactaatga cacacacaaa 2460 cagttttaaa ttatctgttt aatagtaggt aaatacattc atacacaaat atttatatgt 2520 aatttggtgt tttaagttac acttccaaag aagtgctggc ttttgagctc tttttagaat 2580 gctcaccgta gtcatccata gaaagactag cattgaagac tctatccatg tatttgactt 2640 gatcatcgta tttcttcaga gagattgaac tggctgttcc tgggttactc ttgctgagca 2700 attcaacagc tgatttgaac atgttatcca attcgccctt aaactcaatt tgtgaggcag 2760 aaagaacttt agctactttg cacacctgtt cataagtaga gaagttttta atgcctaact 2820 tctctttctt tacattttgg taataagcta aagggaatat aactggtgcc agtcctttca 2880 cactagataa gagaggtaaa ggacctccaa tacacaacat cattcttaaa gcacacgaat 2940 cataagctgc aggaacattc aagccataag ctgccaccaa tggcagttcc attatttttg 3000 tgtacatctc ttgcttggca ttttcattag tacttttctc caccatacta accatttttg 3060 ttctgatgaa agcttctgtc cttttaaaag tccaatcatc agggcctact tgagcagttg 3120 ttgcaacaat atttttccca cagaaattat atttcccatt cttgcaagca gtaaaaatct 3180 gctttctgca cttcaagatg tttaaacagg ttgtaaaagt gatttcaaca tccttattat 3240 tatcgtaaaa agatttaaaa ctgaacccag gtgttgcatc ttcggtttca atttcaatgt 3300 cagcggcacc accagccaac aagtctttga ttttcttgtc ggtgagctgc ttaacgttag 3360 acatggtgtt tactatggaa acgtttaata tgatgacttt aatcggattt tattagcgcc 3420 tcgattgctc t 3431 //