ID GQ268327; SV 1; circular; genomic DNA; STD; VRL; 2746 BP. XX AC GQ268327; XX DT 28-JUL-2009 (Rel. 101, Created) DT 26-AUG-2010 (Rel. 105, Last updated, Version 2) XX DE Ageratum enation virus isolate Gorakhpur, complete genome. XX KW . XX OS Ageratum enation virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2746 RX DOI; 10.1007/s10327-010-0243-4. RX AGRICOLA; IND44407169. RA Raj S.K., Snehi S.K., Khan M.S., Tiwari A.K., Rao G.P.; RT "Detection of Ageratum enation virus from cat's whiskers (Cleome gynandra RT L.) with leaf curl symptoms in India"; RL J. Gen. Plant Pathol. 76(4):292-294(2010). XX RN [2] RP 1-2746 RA Snehi S.K., Raj S.K., Tiwar A.K., Rao G.P.; RT "First molecular identification of Ageratum enation virus associated with RT mosaic disease of parwal (Trichosanthes dioica L.) in India"; RL Unpublished. XX RN [3] RP 1-2746 RA Snehi S.K., Raj S.K., Tiwar A.K., Rao G.P.; RT ; RL Submitted (15-JUN-2009) to the INSDC. RL Plant Molecular Virology, National Botanical Research Institute, Rana RL Pratap Marg, Lucknow, U.P. 226001, India XX DR MD5; 3647d03043bcb66aff13699fbaf19ae7. DR EuropePMC; PMC4353908; 25674770. XX FH Key Location/Qualifiers FH FT source 1..2746 FT /organism="Ageratum enation virus" FT /segment="DNA A" FT /host="Trichosanthes dioica (parwal)" FT /isolate="Gorakhpur" FT /mol_type="genomic DNA" FT /country="India" FT /collected_by="A.K. Tiwari" FT /collection_date="25-May-2008" FT /identified_by="S.K. Raj" FT /db_xref="taxon:188333" FT gene 133..480 FT /gene="AV2" FT CDS 133..480 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /note="silencing supressor protein" FT /db_xref="GOA:C7EDT3" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:C7EDT3" FT /protein_id="ACT75667.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL FT ISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKS" FT gene 293..1066 FT /gene="AV1" FT CDS 293..1063 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="involved in encapsidation and virus transmission" FT /db_xref="GOA:C7EDT4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:C7EDT4" FT /protein_id="ACT75668.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKARAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGRVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1060..1464) FT /gene="AC3" FT CDS complement(1060..1464) FT /codon_start=1 FT /gene="AC3" FT /product="replicase enhancer protein REn" FT /note="increases viral replication" FT /db_xref="GOA:C7EDT5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C7EDT5" FT /protein_id="ACT75669.1" FT /translation="MDSRTGELITAAQAENGVYTWENQNPLYFKITEHQNRPFLMKEDI FT ITVQIQFNYNLRKALEIHKCFLAYRIWMTSQPPTGQFLRVFKTQVLKYLNNLGIISINN FT VIRAVDHVLWDVLEHIVYVDQSYSIKFNIY" FT gene complement(1205..1609) FT /gene="AC2" FT CDS complement(1205..1609) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator protein TrAP" FT /note="transcriptional activator for virus sense genes" FT /db_xref="GOA:C7EDT6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C7EDT6" FT /protein_id="ACT75670.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALA FT CHNHGFTHRGTHHCSSSREWRVYLGESKSPVFQDNRTPEPAISYERGHHHRPNTVQLQP FT EESVGDTQVFSSLPNLDDFTASDWAILKGL" FT gene complement(1512..2597) FT /gene="AC1" FT CDS complement(1512..2597) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein Rep" FT /note="involved in viral DNA replication" FT /db_xref="GOA:C7EDT7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C7EDT7" FT /protein_id="ACT75671.1" FT /translation="MAAPNRLKINAKNYFLTYPKCSLTKEEALFLLLNLQPPTNKKYIK FT IFRELHEDGSPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQGAKSSTDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAAMAIIKEKLPEKFIFQYH FT NLNSNLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVMVAAARPLRPQSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNAIRNWALKNAIFVTLEGPL FT YSGSNQSAAQASQEGDEASTC" FT gene complement(2183..2440) FT /gene="AC4" FT CDS complement(2183..2440) FT /codon_start=1 FT /gene="AC4" FT /product="C4 protein" FT /note="involved in silencing supression" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q8QVG9" FT /protein_id="ACT75672.1" FT /translation="MGALISMCSSSSKGNISARINDSSTWSPQTGQHISIRTFRELNPA FT PTSSPTSTRTETPSNGESSRSMGDLHEEVNRQLMMLLQKP" XX SQ Sequence 2746 BP; 735 A; 546 C; 621 G; 844 T; 0 other; accggatggc cgcgaatttt ttgtggcccc cgcaacgcat ttacatgtgg accaatgaaa 60 ttggctcctc gtggcttaat tgttttgtgg tcccttattt aaacttgctc accaagtagt 120 gcactccgca ctatgtggga tccattagta aacgagtttc ccgaaaccgt tcacggtttt 180 agatgtatgt tagcagttaa atatctgcag ttagtagaga agacttattc tcctgataca 240 ttagggcacg atttaattag ggatttaatt tcagtaatta gggctagaaa ttatgtcgaa 300 gcgaccagca gatataatca tttccacgcc cgcttcgaag gtacgccgcc gtctcaactt 360 cgacagccca tatgtgagcc gtgctgctgc ccccattgtc cgcgtcacca aagcaagagc 420 atgggcgaac aggcccatga acagaaagcc caggatgtac aggatgtaca gaagtcctga 480 tgtccctaga ggatgtgaag gcccatgtaa ggtccagtcg tttgagtcca gacatgacat 540 tcagcatata ggtagagtca tgtgtgtcag tgatgttacg cgtggaactg ggctgactca 600 ccgagtgggt aaaaggtttt gtgttaaatc cgtttatgtc ttgggtaaga tatggatgga 660 cgaaaatatt aagaccaaga accacactaa cagtgttatg ttttttttag ttagggatcg 720 taggcctgtc gataaacctc aagattttgg agaggttttt aacatgtttg ataatgagcc 780 cagtacggct actgtgaaga atgttcatcg tgataggtat caagtgcttc ggaaatggca 840 tgcaactgtt acgggtggac aatatgcgtc aaaggaacaa gctcttgtga agaagtttgt 900 tagggttaat aattatgttg tgtataacca gcaagaagct ggcaagtatg aaaatcattc 960 tgagaatgcg ttaatgttgt atatggcatg tacgcatgcc tctaacccag tgtatgctac 1020 tttgaagata cggatctatt tctatgattc tgtaacaaat taataaatat tgaattttat 1080 tgaataagat tggtctacat atacaatgtg ttctaataca tcccataata catgatcaac 1140 tgcacgaatt acattattaa tactgataat tcctaaatta tttaaatatt taagcacttg 1200 ggtcttaaag acccttaaga attgcccagt cggaggctgt gaagtcatcc agattcggta 1260 ggctagaaaa cacttgtgta tctccaacgc tttcctcagg ttgtaattga actgtatttg 1320 gacggtgatg atgtcctctt tcataagaaa tggccggttc tggtgttctg ttatcttgaa 1380 atacagggga ttttgattct cccaggtata cacgccattc tctgcttgag ctgcagtgat 1440 gagttcccct gtgcgtgaat ccatggttgt ggcaggctaa tgctatgaag tatgaacacc 1500 cacaagggag atcaacacgt cgacgcctcg tccccttctt ggctagcctg tgctgcactt 1560 tgattggaac ctgagtagag tgggccttcg agggtgacga agatcgcatt ctttaaagcc 1620 caatttctga ttgcattatt cttctcttca tccaagaact ctttataact tgaattaggt 1680 cctggattgc agaggaagat agtgggaatt ccgcctttaa tttgaactgg ctttccgtat 1740 ttggtatttg attgccagtc cctttgggcc cccatgaatt ctttaaagtg ctttaggtag 1800 tggggatcta cgtcatcgat gacgttatac cacgcatcat tgctgtaaac tttggggctt 1860 agatctaaat gaccgcatag gtaattatga ggccctaatg acctagccca catcgtttta 1920 cccgtacgac tgtctccctc aattactata ctttgaggcc tcagaggccg cgcagcggca 1980 accatgacat tttctgagac ccattcttca agttcttcag gaacttgatc aaaagaagaa 2040 gataaaaaag gcgaaacata aacctccaac ggaggagtaa aaatcctatc taaattagaa 2100 tttaaattat gatattgaaa aataaatttt tctgggagtt tctcctttat tatagccatt 2160 gcagcttctt tagaacctgc atttagggct tctgcagcag catcattagc tgtctgttga 2220 cctcctcgtg cagatctccc atcgatctgg aactctcccc attcgagggt gtctccgtcc 2280 ttgtcgatgt aggacttgac gtcggtgctg gatttagctc cctgaatgtt cggatggaaa 2340 tgtgctgacc tgtttgggga gaccaggtcg aagaatcgtt gattcttgca ctgatatttc 2400 ccttcgaact ggatgagcac atggagatga gggctcccat cttcgtgtag ttctctgaag 2460 atcttgatgt attttttgtt tgttgggggt tggagattta ataataggaa aagtgcctct 2520 tctttagtaa gggagcactt gggataagtg agaaaataat ttttggcatt tatttttaac 2580 cgattcgggg ctgccatgtt gacttagtca atcggtgtct ctcaaccttc tctatgtatc 2640 ggtgtatcgg agtcctatat atatggagac tccaatggca taattgtaat aacaaaactt 2700 taatttgaaa tccttaaggc tccaaagcgg ccatccgtct aatatt 2746 //