ID FR694192; SV 1; linear; genomic RNA; STD; VRL; 3829 BP. XX AC FR694192; XX DT 23-DEC-2010 (Rel. 107, Created) DT 23-DEC-2010 (Rel. 107, Last updated, Version 1) XX DE Avian orthoreovirus segment L2, strain AVS-B, genomic RNA XX KW . XX OS Avian orthoreovirus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus. XX RN [1] RP 1-3829 RA Banyai K.; RT ; RL Submitted (29-SEP-2010) to the INSDC. RL Banyai K., Hungarian Academy of Sciences, Veterinary Medical Research RL Institute, Hungaria krt. 21., Budapest, H-1143, HUNGARY. XX RN [2] RA Banyai K., Dandar E., Dorsey K.M., Mato T., Palya V.; RT "The genomic constellation of a novel avian orthoreovirus strain associated RT with runting-stunting syndrome in broilers"; RL Virus Genes 0:0(2010). XX DR MD5; e166fd353061bcd448af6f7ebf3beaa2. XX FH Key Location/Qualifiers FH FT source 1..3829 FT /organism="Avian orthoreovirus" FT /segment="L2" FT /strain="AVS-B" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:38170" FT CDS 14..3793 FT /gene="lambda-B" FT /product="lambda-B protein" FT /db_xref="GOA:E7AXT1" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR012915" FT /db_xref="UniProtKB/TrEMBL:E7AXT1" FT /protein_id="CBX25024.1" FT /translation="MRVNGFDDATLSYAQSISGVIPMTNKLFEQASASIRALPRSHVYA FT LLDDVNFSVSCVIPNRIFHHSDHSEYFYVDAVNRVRRKQVIDPDDVFVPNCNLQGLISP FT MERLPNYGQLSEIISSNARDGLPSARIAATFYNISVSQARQIKAPLETFLLPLLLSETY FT SLSEDPCGLDTTASPPIHTNLALWVLREISRTICGSSKDRSPWLLLDSGVAWFMSPLMS FT SAIPPLMADLTNLAIYKQICSVSDEMHSLAVQMVLQAAASQSYGHYILQTKSIFPQNTL FT HNMFRTLTDGIVPVIDWLEPRSNYRFMLQGARRVTSDDANQAPDNTEAAEQLGRKMGCL FT DVVRSLRKMSSSITVHSHDAMTFVRDAMSCTSGIFITRQPTETVLKEYTQAPTIEVPIP FT QSDWSPPIGSLRYLSDACSLPAVYLARAWRRAASAVVDNPHTWDPLYQAILRSQYVTSR FT GGSGAALRDALKAAEVELPQYPGVSVKVATKIYQAAQTADVPFDKLSRAVLAPLSMGLR FT NQVQRRPRTIMPMNVVQQQISAAHTLSADYINYHMNLSTTSGSAVIEKVVPLGMYASCP FT PAQAVNIDIKACDASITYQYFLSVIVGAIHEGAAGRRVSSSFMGVPPSVLSVVDSSGVT FT SSVPISGFQVMCQWLAKLYQRGFEYQVTDTFSPGNIFTHHTTTFPSGSTATSTEHTANN FT STMMDGFLRAWIPASGASDVLKKFCKSISIQRNYVCQGDDGLMVVDGLSTGKLSGEIID FT EFVKELRAYGKSFGWNYDIEFTGNAEYLKLYFLNGCRIPNVSRHPICGKERASGDKLEM FT WPSTIDIFNGIFVNGVHDGLPWRRWLRYCWALALMYSGKIVRHDDSEVLIQYPMWSFVY FT WGLPPISAFGSDPWIFSPYMPTGDHGFYSMLTLVRPLIAASSPPSDASGLFGQCDHNTL FT FNSELVYQGYYMAQCPRQPSRSNRRDDPDSVQRFVKALESYLYISPELKSRVRLGRDRW FT QKLVGYTEKSPPSLDDVALKWFRSAQEADLPTAVEIQAMDLSLLSARRRTYQGFSKLLN FT TYLRVTWDLSEPIDHAVDPRVPLCAGISPSNSEPFLKLYSVGPMMQSTRKYFSNTLFIH FT RTVSGLDVDVVDRALLRLRALNAPDDVVVAQLLMVGLSEAEAATLAAKIRTMDINAVQL FT ARVVNLSIPDSWMTMDFDRLIRDIVSITPLTVRSLTTDLPSGVPWARAILQFLGAGVAM FT TAVGPVRRPYLHSVAGGMASFIKQFRRWMRAETR" XX SQ Sequence 3829 BP; 847 A; 922 C; 899 G; 1161 T; 0 other; gcttttcctc accatgcgtg tcaacgggtt tgatgatgct actctctctt acgcacaatc 60 catttcgggg gttattccta tgacaaataa gttatttgag caagcatccg catcaatacg 120 tgctttaccc cgatcacacg tttacgctct gttagacgac gttaatttct ctgtttcatg 180 cgtaattcca aatcgcatct tccaccactc tgaccactct gagtattttt acgttgatgc 240 ggttaataga gttaggcgta aacaggttat tgatcctgat gatgtgttcg ttcctaattg 300 taatttacag ggtctcatct ctccaatgga gaggttaccg aattatggcc agttatcgga 360 aattatttcg tcgaatgcac gtgacggcct gccgtccgct cgcatagcgg ctacatttta 420 taatatttct gtgtcccaag ctcgtcagat taaggctccg cttgaaacat ttttgttgcc 480 cttactgctg tctgagacct actctttatc agaggatcct tgtggtcttg acactacagc 540 ttctcccccg attcatacaa atttagcgtt atgggtgtta cgtgaaatta gtcgaactat 600 ttgtggatct tcaaaggatc gctcaccctg gttgttactt gactccggtg ttgcgtggtt 660 catgtctccg ttaatgtcat cagctatccc acctcttatg gctgatttga ctaatctagc 720 gatttacaaa cagatctgtt ccgtttctga cgagatgcat tctcttgcgg ttcaaatggt 780 tttacaagct gctgcgtcac agtcatatgg tcattacata ttgcagacaa agtcaatatt 840 tcctcagaac accttacaca acatgtttcg gacgctcact gatggcatcg taccagtcat 900 tgattggttg gaaccgcgtt ccaattaccg tttcatgctt cagggtgcgc gtagggtgac 960 ttcagatgat gcgaatcaag cgccggacaa tacggaagca gctgagcaac tcggtcgtaa 1020 gatgggatgc ttagatgttg tgcgatctct gcgtaagatg tcttcatcta ttactgttca 1080 ctcacatgat gcgatgactt tcgtgcgtga cgccatgtcg tgtactagtg gtatatttat 1140 tacacgtcaa cctactgaga ctgttttaaa agagtatacc caagctccca ctattgaagt 1200 gcccattcca caatcggact ggtcaccgcc tattggatct ttacggtacc tttcagatgc 1260 ctgctctctt cctgctgtgt acttggctag agcttggcga cgggccgctt ctgcagtggt 1320 agacaaccct cacacttggg atcctttata tcaggctatt cttcgctccc aatacgtgac 1380 atcccgtggt gggtctggtg cagcgctgag agatgcttta aaggctgctg aggttgagct 1440 tcctcaatat cctggggtca gtgttaaggt agccactaag atttaccaag cggctcaaac 1500 tgcagatgtc ccctttgata aattatctcg agccgttcta gctccactgt caatgggtct 1560 gcgtaaccaa gttcagcgac gtccaaggac cattatgcct atgaatgtcg tccaacaaca 1620 gatttcggcg gcccacactc tctccgctga ctacattaac tatcacatga acctatcgac 1680 aacatcaggc agcgcggtca tcgagaaggt agtcccactg ggcatgtatg catcatgtcc 1740 tcctgctcag gcggttaata tcgacattaa ggcatgtgac gcttctatta cgtatcagta 1800 ttttctttcg gttattgtcg gcgctattca cgagggtgca gcagggcgtc gtgtctcgtc 1860 ctcatttatg ggagtccctc ctagtgtctt gtctgtcgtt gattctagtg gagtgacgtc 1920 gtcagtgcct atttctggtt ttcaggttat gtgtcaatgg ttggctaagc tctaccagcg 1980 aggttttgag tatcaagtca cggacacatt ttcgccaggt aatatcttta cacatcacac 2040 tactactttt ccctctggtt cgacggcgac gtctacggaa catactgcta ataatagcac 2100 gatgatggac ggattccttc gcgcttggat tcctgcttct ggcgcgtctg atgtcttgaa 2160 gaagttctgc aaatccattt cgatacaacg gaactatgtt tgccagggcg acgatggtct 2220 aatggtggtt gatgggttgt caactggcaa attgtcaggt gaaataatcg atgaattcgt 2280 taaagagcta cgggcttatg gtaaatcgtt tgggtggaac tatgacatag agttcactgg 2340 gaatgctgaa tatttgaagc tatatttcct aaacggttgt cgtataccta acgtttctcg 2400 acatccaatc tgtggtaagg aacgagcctc aggagacaaa ctggagatgt ggccgtctac 2460 cattgacata ttcaatggca tatttgtgaa cggcgtgcat gatggcttac catggcgtag 2520 atggctgcgt tattgttggg ctcttgctct catgtattcc ggaaaaatcg tacgtcatga 2580 cgactctgag gtgttaatcc aatatcctat gtggtccttc gtctattggg gcttacctcc 2640 tatcagtgcc ttcggttctg atccttggat cttctctcca tacatgccta ctggtgacca 2700 tggcttttat tcaatgttaa cattagtgcg tcccttgatc gccgcctcgt ctcccccgtc 2760 ggacgcttct gggctattcg gtcagtgcga tcataacacc ctgttcaact ctgaattagt 2820 atatcagggt tactatatgg cgcaatgtcc acgacaacct tctcgctcaa atcgtagaga 2880 tgatcccgat tcggtgcaac gttttgtcaa ggctctagag tcttacctgt acatctcccc 2940 tgaactgaaa tcacgagtga gacttggccg tgatcgatgg cagaaattgg ttggctacac 3000 ggagaaatct ccaccttcgc ttgatgacgt agctctcaag tggtttcgta gtgctcaaga 3060 ggccgatctt ccgactgctg tagaaattca ggccatggat ctgtccttgt tatctgcaag 3120 acgtcggaca tatcagggat tttctaaatt attgaatact tacttgagag tgacttggga 3180 cttgtccgaa ccaattgacc acgctgtgga tccccgtgtc cctctgtgtg ctggtatatc 3240 tccgtcgaat agcgagccgt tcttaaaatt gtactctgtt ggcccgatga tgcaatcgac 3300 acgtaaatat ttcagtaata ctttattcat tcaccgtact gtatccggtc tcgatgtcga 3360 tgttgtcgat cgtgctcttt tgaggttgcg tgcactcaat gcgcctgatg acgtggttgt 3420 agcccagctt ctcatggtag gtttatccga agccgaagcg gccacgctgg cagcgaagat 3480 acggacgatg gatatcaacg ccgtgcagtt agcgagagtt gtcaatctgt ctatccctga 3540 ctcgtggatg actatggact tcgaccgtct gatacgagac atagtgtcta tcactccgtt 3600 gactgtccgc tctttaacta ctgatctacc gtccggtgtc ccatgggcac gtgcgatact 3660 ccagttctta ggtgcgggtg ttgctatgac cgccgttggc cccgtgcgtc gtccctatct 3720 gcattcggta gctggaggca tggcatcgtt cattaagcag ttccgccggt ggatgcgtgc 3780 tgaaacgagg tagcgtccgt gcccggcatg gctcgaggaa ttactcatc 3829 //