ID FN600540; SV 1; circular; genomic DNA; STD; VRL; 2767 BP. XX AC FN600540; XX DT 08-MAR-2010 (Rel. 104, Created) DT 11-MAR-2011 (Rel. 108, Last updated, Version 2) XX DE Tomato leaf curl Namakely virus complete genome, isolate DE Comoros:Foubouni:Tobacco:2005 XX KW complete genome. XX OS Tomato leaf curl Namakely virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2767 RA Lett J.M.; RT ; RL Submitted (08-DEC-2009) to the INSDC. RL Lett J.M., CIRAD-UMR PVBMT-3P, Bios, 7 Chemin de l'IRAT / Ligne Paradis, RL 97410 Saint Pierre / Ile de La Reunion, FRANCE. XX RN [2] RA Thierry M., Lefeuvre P., Hoareau M., Delatte H., Becker N., Reynaud B., RA Martin D.P., Lett J.M.; RT "Complex of begomovirus associated with tobacco leaf curl disease in RT Comoros: new evidence of a natural interspecific recombinant with a RT differential disease phenotype"; RL Unpublished. XX DR MD5; fcdb26559dd1b6c73481b0bed723924f. XX FH Key Location/Qualifiers FH FT source 1..2767 FT /organism="Tomato leaf curl Namakely virus" FT /host="Nicotiana tabacum (tobacco)" FT /isolate="Comoros:Foubouni:Tobacco:2005" FT /mol_type="genomic DNA" FT /country="Comoros:Grande Comore Island:Foubouni" FT /collection_date="16-May-2005" FT /db_xref="taxon:439421" FT CDS 138..488 FT /gene="V2" FT /product="movement protein" FT /db_xref="GOA:D3UT99" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D3UT99" FT /protein_id="CBI70237.1" FT /translation="MWDPLLNEFPDSVHGFRCMLAIKYLQAIEQTYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARFEGASKVELRQPVYQPCCCPHCPRHKQTSVMDVQAHV FT SKAQDVQNVQKP" FT CDS 298..1074 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:D3UTA0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D3UTA0" FT /protein_id="CBI70238.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPFTSRAVVPIVPGTSRRRSW FT TYRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGPGITH FT RVGKRFCVKSIYILGKIWMDENIKKQNHTNQVMFFLVRDRRPYGAAPMDFGQVFNMFDN FT EPSTATVKNDLRDRYQVLRKFHATVVGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN" FT CDS complement(1071..1475) FT /gene="C3" FT /product="replication enhancer protein (REn)" FT /db_xref="GOA:D3UTA1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D3UTA1" FT /protein_id="CBI70239.1" FT /translation="MDLRTGELITAAQAQSGVFIWEIQNPLYFKIIYHDSRPFNMNQDI FT LLIQIRFNHNLRKELGIHRCFLNFKVWTSLRPQTGRFLRVFRTQVLKYLDRLGVVSINS FT VIKAVDYVLYNVLINTLQVTENHEIKFNLY" FT CDS complement(1216..1623) FT /gene="C2" FT /product="transcriptional activator protein (TrAP)" FT /db_xref="GOA:D3UTA2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D3UTA2" FT /protein_id="CBI70240.1" FT /translation="MQPSSPSTSHCSQIPIKVKHRIAKKRPIRRKRIDLGCGCSYYLHI FT NCINHGFTHRGTHHCSSSTEWRVYLGDTKSPIFQDHLPRQSTIQHEPRHPINPDTVQPQ FT LEEGIGNSQMFSQLQGLDELTPSDWSFLKSV" FT CDS complement(1532..2611) FT /gene="C1" FT /product="replication-associated protein (Rep)" FT /db_xref="GOA:D3UTA3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D3UTA3" FT /protein_id="CBI70241.1" FT /translation="MAPPRRFKIFAKNYFLTYPKCSLTKEEALSQIQALETPVNKLFIK FT ICRELHENGEPHLHVLIQFEGKYQCANQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQSANDAYAAALNSGSKSEALRVIRELAPKDFVLQFH FT NLNSNLDRIFQEPPAPYVSPFLSSSFNQVPEELEVWVSENVMGSAARPWRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNAPLKDWALKNATFVTLHEPL FT FSNTNQGQTPHSEEETHST" FT CDS complement(2152..2454) FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D3UTA4" FT /protein_id="CBI70242.1" FT /translation="MGNLICMCLSSSRVSTSARISDSSTLYPQQGQHISIRTFRELNPV FT PTSSPTSTRTETPLSGASFRSMDDLQEGDNSQPMTLTPQHLTQAVSQRLLESLGS" XX SQ Sequence 2767 BP; 733 A; 565 C; 643 G; 826 T; 0 other; accggatggc cgcgcccccg aaaaagctaa gtggtccccg cgcactatcg tttgtcatcc 60 aatcagaatc gcgcgtcaaa gcttagatat ttgtttttgt ctttataaac ttgctcgcca 120 aggagttgtc ccacaaaatg tgggatccac tcctaaacga gttcccagac tctgttcacg 180 gttttcgttg tatgctagct atcaaatatt tgcaggccat tgagcaaacc tatgagccca 240 atactttggg ccacgatttg attcgtgatc tcatatctgt tgtcagagcc cgtgactatg 300 tcgaagcgac ccgccgatat aatcatttcc acgcccgctt cgaaggtgcg tcgaaggttg 360 aacttcgaca gcccgtttac cagccgtgct gttgtcccca ttgtcccagg cacaagcaga 420 cgtcggtcat ggacgtacag gcccatgtat cgaaagccca ggatgtacag aatgtacaga 480 agccctgatg ttccaaaggg ttgtgaaggc ccatgtaagg tccagtctta tgagcagagg 540 gatgatgtta aacatactgg tattgttcgt tgtgttagtg atgttacgcg tggtccggga 600 attactcata gggttggcaa gaggttctgt gttaagtcta tttacatttt agggaagata 660 tggatggatg aaaatatcaa gaagcagaat cacactaatc aggttatgtt ttttttagtc 720 cgtgatagaa ggccctatgg tgcagcccca atggattttg ggcaggtgtt taacatgttt 780 gataatgagc ccagtaccgc tacggtgaag aatgatttga gagacagata ccaggttttg 840 cggaagtttc atgcaactgt tgttggtgga ccctcaggga tgaaggagca ggcattagtt 900 aagagatttt ttaggattaa tagtcatgta acttataatc atcaggaggc agcgaagtat 960 gaaaatcata ctgagaatgc tttgttgttg tatatggcat gtactcatgc ttcgaatcct 1020 gtgtatgcta ctcttaagat acggatctat ttttacgatt cggtcagcaa ttaataaaga 1080 ttgaatttta tttcatgatt ctccgtaact tggagtgtat ttataagtac attgtacaat 1140 acataatcaa ctgcttttat tacagaatta attgaaacta cacctaatct atctaaatac 1200 tttaaaactt gagtcctaaa cactcttaag aaacgaccag tctgagggcg taagctcgtc 1260 cagaccttga agttgagaaa acatctgtga attcccaatt ccttcctcaa gttgtggttg 1320 aaccgtatct ggattaatag gatgtcttgg ttcatgttga atggtcgact gtcgtggtag 1380 atgatcttga aatatagggg attttgtatc tcccaaataa acacgccact ctgtgcttga 1440 gctgcagtga tgagttcccc ggtgcgtaaa tccatggttg atgcagttga tgtgtagata 1500 gtaggagcag ccacagccta ggtctatgcg cttacgtcga atgggtctct tcttcgctat 1560 gcggtgtttg accttgattg gtatttgaga acaatggctc gtggagggtg acgaaggttg 1620 cattctttag tgcccagtct tttagtggtg cattcttttc ctcgtctagg aactctttat 1680 acgaggaagt tggtcctgga ttgcaaagga agatagtggg aattccgcct ttaatttgaa 1740 ttggcttccc gtattttgtg ttgctttgcc agtccctttg tgcacccatg aattctttga 1800 agtgctttaa ataatgcggg tccacgtcat caatgacgtt gaaccatgca tcattactgt 1860 acacctttgg gctaagatca agatgaccac acaaatagtt gtggggtccc aatgatctgg 1920 cccacattgt cttccccgtc cgactatcac cctcaatcac aatactaatc ggtctccaag 1980 gccgcgcagc ggaacccatg acgttctctg acacccagac ttcaagttct tccggaactt 2040 gattaaaaga agaagaaaga aaaggagaaa cataaggagc cggaggctcc tgaaaaatcc 2100 tatctaaatt actatttaaa ttatgaaact gtaaaacaaa atcttttgga gctaactccc 2160 taatgactct aagagcctct gacttactgc ctgagttaag tgctgcggcg taagcgtcat 2220 tggctgactg ttgtccccct cttgcagatc gtccatcgat ctgaaactcg ccccactcaa 2280 gggtgtctcc gtccttgtcg atgtaggact tgacgtcgga actggattta gctccctgaa 2340 tgttcggatg gaaatgtgct gaccttgttg gggatacaag gtcgaagaat cgctgattcg 2400 cgcactggta cttaccctcg aactggataa gcacatgcag atgaggttcc ccattttcgt 2460 gtaattctct gcaaattttg atgaataatt tattgactgg ggtttctaag gcttgtattt 2520 gggatagtgc ttcctctttt gtgagagagc actttggata agtgaggaaa taatttttag 2580 caaaaatttt aaaacgacgt ggaggagcca tttagtcaat gtacaccgat tgactagcga 2640 gagcatttgg tgcctgcaat cggtgtatcg gtgtccaata tataggtgta caccgaatgg 2700 caatttggta aaaagcctca ttgtaatttg aatttcgaaa tccaaaagcg gccatccgta 2760 taatatt 2767 //