ID FM999833; SV 1; circular; genomic DNA; STD; VRL; 2734 BP. XX AC FM999833; XX DT 19-FEB-2009 (Rel. 99, Created) DT 19-FEB-2009 (Rel. 99, Last updated, Version 1) XX DE Wheat dwarf virus HE complete genome, barley strain. XX KW complete genome. XX OS Wheat dwarf virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2734 RA Palkovics L.; RT ; RL Submitted (12-FEB-2009) to the INSDC. RL Palkovics L., Plant Pathology, Corvinus University of Budapest, Menesi Road RL 44., H-1118, HUNGARY. XX RN [2] RA Tobias I., Kiss B., Palkovics L., Salanki K.; RT "Characterization of barley strains of WDV"; RL Unpublished. XX DR MD5; d95f2575354591d2146cc3a4f1ab5c0d. XX FH Key Location/Qualifiers FH FT source 1..2734 FT /organism="Wheat dwarf virus" FT /isolate="HE" FT /mol_type="genomic DNA" FT /country="Hungary:Heves" FT /isolation_source="Hordeum vulgare" FT /collected_by="Balazs Kiss" FT /collection_date="Sep-2007" FT /identified_by="Istvan Tobias" FT /db_xref="taxon:10834" FT CDS 407..679 FT /product="V1 movement protein" FT /db_xref="GOA:Q5K2S1" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:Q5K2S1" FT /protein_id="CAX48562.1" FT /translation="MDQVFTPPRSIRADQYQAPYDPGSSDYAWRTFVFVSFGLLISVGV FT VWLAYTLFLKDCILVWKAKKQRRTEEIGYGNTPARPNGDQQGLPR" FT CDS 651..1433 FT /product="V2 coat protein" FT /db_xref="GOA:A6GVG4" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:A6GVG4" FT /protein_id="CAX48563.1" FT /translation="MVTNKDSRGKGKRKLEEGESSGRWKGQVYKRRKQTYKVVPVRPPA FT LCVYRYNWLNSDKTNIVVGNTPRIDLITCFAAGKADNNRHTNQTILYKFNLQGTCYVSD FT SSCMFITPIRVYHWLVYDAEPKQATPDSTDIFTMPWNLLPSSWTVQRAWSHRFVVKRKW FT CVNLVSDGRKVGSKTVDSRYNYVVGKNIVDASKFVKGLRVTTEWMNTGDGKIGDIKKGA FT LYLVTCTRGGITGDSASISFEVVCAYTHACYFKSIGIQ" FT CDS complement(join(1605..2019,2106..2734)) FT /gene="rep" FT /product="replicase" FT /db_xref="GOA:C0MP38" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:C0MP38" FT /protein_id="CAX48561.1" FT /translation="MASSSAPRFRVYSKYLFLTYPQCILEPQYALDSLRTLLAKYEPLY FT IAAVRELHEDGSPHLHVLVQNKLRASITNPNALNIGMNTSPFSFFHPNIQAAKDCNQVR FT DYIMKEVDSDVNTAEWGTFVAVTTPGRKDRDADMKQIIESSTSREEFLSMVCHRFPFEW FT SIRLKDFEYTARHLFPDPVSTYTPEFPIESLMCHETIESWKNEHLYSESPGRHKSIYIC FT GPTRTGKTSWARSLGIHNYYNSLVDFTTYDVNAKYNIIDDIPFKFTPNWKCFVGAQRDF FT TINPKYGKRKMIRGGIPCIILVNPDEDWLKDMTPEQSDYMYSNAVIHYMYEGESFFAFG FT ENVTASQ" FT exon complement(1605..2019) FT /gene="rep" FT /number=2 FT mat_peptide complement(1943..2734) FT /gene="rep" FT /product="Rep" FT intron complement(2020..2105) FT /gene="rep" FT /number=1 FT exon complement(2106..2734) FT /gene="rep" FT /number=1 XX SQ Sequence 2734 BP; 692 A; 598 C; 745 G; 699 T; 0 other; agtagcaagc agaagcccgg caggtcctta gcgaaaaaac ggggtgtgct cccgaactct 60 actctctacc ctgcgtggga gtgtgcagaa ttcacaccga tgggctcggt gtccacggtt 120 taaatattgc aggtttaggt gggaacgcgg gaccctgtct tttcggcgcg aaagcgacgg 180 gtggtcccgc gtgtggtttg tggctcgggg acccgccacg caggaatcta atattaccct 240 gcgtggtggg tcccgaggcg cactcggctt ttcgtgagtg cgccgaggct tttggaccac 300 gtctttatgt catcatatca attattggtg gtgagtcatc acatattcca cctgcaatta 360 tgtgccctcg cttagcttat aaggaagtgt cggggaaggt atctcgatgg atcaggtctt 420 tacaccgccg cgttctatac gggcagatca ataccaggcc ccttacgatc ccgggtcctc 480 cgactacgcc tggcggacct ttgtgttcgt ctccttcggt ttgttaatat ccgtaggagt 540 tgtttggttg gcttacactc tgttcttgaa ggactgcata ttagtgtgga aggcgaagaa 600 gcagaggagg accgaggaaa ttggttacgg taatacaccg gccagaccaa atggtgacca 660 acaaggactc ccgaggtaag ggaaagagga agctcgagga gggcgaatcg agtggaaggt 720 ggaaggggca agtgtataag cggcgtaagc agacctacaa ggtagtacct gtgaggccac 780 ccgccctgtg tgtgtaccgg tataactggc tcaattcaga caagaccaat atcgtggtgg 840 gtaacacccc tcggattgat ctgattacct gctttgcagc gggcaaggcc gataataatc 900 ggcatacaaa tcagaccatc ctctacaagt ttaacctaca ggggacctgt tacgtgtcgg 960 actcttcatg tatgttcata accccaatca gggtttatca ctggttggtc tatgatgcag 1020 agccgaagca ggctacgcct gactccactg acatctttac gatgccttgg aatctgctgc 1080 cgagttcatg gactgtgcaa agggcttggt cgcatcggtt cgtggtgaag aggaagtggt 1140 gcgtgaacct ggtctccgat ggaaggaagg ttggatccaa gacggtggac tcccgctaca 1200 actacgtagt ggggaagaat atcgttgacg cctccaagtt cgtgaagggt ttgcgcgtga 1260 cgacggagtg gatgaacacg ggtgacggca agataggcga tattaagaag ggtgccctgt 1320 atctagtaac ctgtactcgt ggaggtatca ctggagacag tgcctccatt tcattcgaag 1380 ttgtatgtgc ctatacgcac gcgtgttact tcaaatccat tgggattcaa taaataaaat 1440 agtattttat tcatctcatg tcattcgatt acagatgctc ggctacgagc aaagataaac 1500 caaactatga catacaacac actcataacc aaaacatcga aaaaagaaat acaaggggcg 1560 agatcacaca attttagaaa ccgtagccgt ccgcgctagg acagtcactg cgaagcagtg 1620 acattttcgc cgaaggcgaa gaatgattca ccctcataca tataatgtat cacagcgtta 1680 gagtacatgt aatccgactg ttcaggagtc atatccttga gccaatcttc gtctgggtta 1740 actaaaatga tgcaaggtat accaccccgt atcatttttc gcttcccgta cttaggattg 1800 atggtgaagt cacgctgagc cccgacgaag cacttccagt ttggcgtgaa cttgaatgga 1860 atgtcgtcaa ttatgttgta cttggcgttg acgtcatagg tcgtgaaatc aactaggctg 1920 ttgtagtagt tgtggatccc tagagatcgt gcccaggaag tctttcctgt tcttgttgga 1980 ccgcagatgt agatggactt atgccgtccc ggtgactcct ggaataatcg tccatccact 2040 ctaaatcagt tacggcctta tccgcaggag ttgaagtaca aaggatgtat gattcgaggc 2100 ttacggagta gagatgttca tttttccagc tttcaatggt ctcatgacac atgagggact 2160 cgatgggaaa ctcaggtgtg taagtgctaa ctgggtctgg gaataggtgg cgtgcagtgt 2220 attcgaagtc tttcagacgg atagaccatt caaacggaaa acgatggcag accatgctga 2280 gaaattcctc tctcgaggta ctcgactcaa tgatctgttt catatccgcg tctcggtctt 2340 tacgacccgg agtggtaact gctacgaatg ttccccactc agccgtgttg acatcggagt 2400 caacctcctt catgatgtaa tcacgaactt ggttgcagtc tttggcagct tgaatgttag 2460 gatgaaaaaa tgaaaatggt gatgtgttca taccaatgtt gagagcattg ggattggtga 2520 tggaagcacg aagcttgttt tgcacgagta cgtgcagatg tggtgatcca tcttcgtgga 2580 gttccctaac tgcagctatg tacagaggtt catatttggc caagagagtg cgaagagagt 2640 ccaaggcgta ctgtggctct aggatgcatt gaggatatgt taggaagagg tatttggaat 2700 agacacggaa cctgggtgca gatgaagagg ccat 2734 //