ID   FM883215; SV 1; linear; genomic RNA; STD; VRL; 1298 BP.
XX
AC   FM883215;
XX
DT   01-JUL-2009 (Rel. 101, Created)
DT   05-JAN-2010 (Rel. 103, Last updated, Version 2)
XX
DE   Maize dwarf mosaic virus partial polyprotein, isolate Sz0609, genomic RNA
XX
KW   .
XX
OS   Maize dwarf mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1298
RA   Petrik K.;
RT   ;
RL   Submitted (01-DEC-2008) to the INSDC.
RL   Petrik K., Department of Applied Genomics, Agricultural Research Institute,
RL   Brunszvik u. 2, Martonvasar, 2462, HUNGARY.
XX
RN   [2]
RX   DOI; 10.1007/s11262-009-0425-3.
RX   PUBMED; 19937270.
RA   Petrik K., Sebestyen E., Gell G., Balazs E.;
RT   "Natural insertions within the N-terminal region of the coat protein of
RT   Maize dwarf mosaic potyvirus (MDMV) have an effect on the RNA stability";
RL   Virus Genes 40(1):135-139(2010).
XX
DR   MD5; f21f73357466486a239ef6cb42657f0d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1298
FT                   /organism="Maize dwarf mosaic virus"
FT                   /host="Zea mays convar. dentiformis"
FT                   /isolate="Sz0609"
FT                   /mol_type="genomic RNA"
FT                   /country="Hungary:Szeged"
FT                   /collection_date="05-Jul-2006"
FT                   /PCR_primers="fwd_name: MDMV8198fwd, fwd_seq:
FT                   aaaccggtggytrctygaartgc, rev_name: MDMV3, rev_seq:
FT                   atcctaggttttttttttttttttttttttttttttgtc"
FT                   /db_xref="taxon:12203"
FT   CDS             <1..1064
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="GOA:C6GZ28"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:C6GZ28"
FT                   /protein_id="CAT99506.1"
FT                   /translation="LEVQPFANLAKEGLAPYIAESALRNLYTGAKVSEDELNIYARQFF
FT                   DDLSDYLADEVMDVKHQAGENVDAGQKTEAQKEAEKKAAEEKKAKEAEAKQKEAKEKTT
FT                   EKTGDGASAGKDKDVDAGTSGSVSVPKLKAMSKKMRLPQAKGKNILHLDFLLKYKPQQQ
FT                   DLSNTRATRAEFDRWYEAVQKEYELDDTQMTVVMSGLMVWCIENGCSPNINGVWTMMDG
FT                   DEQRTFPLKPVIENASPTFRQIMHHFSDAAEAYIEYRNSPERYMPRYGLQRNLTDFSLA
FT                   RYAFDFYEISSRTPARAKEAHMQMKAAAVRGSNTRMFGLDGNVGETQENTERHTAGDVS
FT                   RNIHSPLGVQQGH"
FT   mat_peptide     <1..188
FT                   /product="NIb"
FT   mat_peptide     189..1061
FT                   /product="CP"
FT   3'UTR           1065..1298
XX
SQ   Sequence 1298 BP; 423 A; 247 C; 314 G; 314 T; 0 other;
     tactcgaagt gcaacctttt gccaacttgg caaaggaagg tttagcacca tacatagctg        60
     agtcagccct tagaaaccta tacactggtg ctaaagtttc agaagatgag ttgaatatct       120
     atgcacgaca gttcttcgat gatctttcag attatttggc tgacgaagtt atggatgtca       180
     aacatcaagc tggtgagaat gttgatgctg ggcaaaagac tgaagcacag aaggaagcag       240
     agaagaaggc agctgaggag aagaaagcaa aggaagctga ggctaaacaa aaagaagcca       300
     aggagaaaac gactgagaaa actggtgatg gtgcgtccgc gggaaaagac aaagacgtag       360
     atgctggaac ttcaggctca gtatcagtac ctaagttaaa agccatgtcc aagaagatgc       420
     gcttgccaca agcgaaagga aagaatattc ttcatcttga cttcctattg aaatacaagc       480
     cacaacaaca agacttatcg aacacccgag caaccagggc tgaattcgat agatggtatg       540
     aagcagtgca gaaagaatac gaacttgatg atacacaaat gacggttgtc atgagtggat       600
     taatggtttg gtgcattgag aatggttgct caccgaacat caatggtgtc tggacaatga       660
     tggacggaga cgaacagaga acatttcctt taaaaccagt tattgaaaat gcatctccaa       720
     ctttcagaca aattatgcat cattttagtg atgcagctga agcatacatt gaatatagaa       780
     attcaccaga gagatatatg ccgagatatg gacttcagcg aaacttaacc gactttagcc       840
     ttgcacgcta tgcatttgat ttttacgaga tatcatctcg aactccagca cgtgcaaagg       900
     aagcccacat gcagatgaag gctgcagcag tccgtggttc aaacacacgg atgtttggtc       960
     ttgatgggaa tgtcggagaa acccaagaaa atacagaacg ccacacagct ggcgacgtta      1020
     gtcgcaacat acattcccct ttgggagttc agcaggggca ctaataaggg gttcaacttt      1080
     tacgcagtaa tttagtaata tataagtaag ctattgtggt gaggttgtac ctcgttagtt      1140
     ttatatatat attatgctac gtacctacta tgtctgcaag tgagtgaggt tgtacctcga      1200
     cacttatagt gggcactatt actagcttcg aatcacgaga cggacgatcc attgagtggt      1260
     tctaccacga ggatgcagcg agtttcgtgg tgagagac                              1298
//