ID   FJ943282; SV 1; linear; genomic RNA; STD; VRL; 780 BP.
XX
AC   FJ943282;
XX
DT   03-JAN-2010 (Rel. 103, Created)
DT   20-JAN-2011 (Rel. 107, Last updated, Version 2)
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DE   Grapevine rupestris stem pitting-associated virus isolate ORCH1d
DE   collection-date Aug-2007 coat protein gene, complete cds.
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KW   .
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OS   Grapevine rupestris stem pitting-associated virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Foveavirus.
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RN   [1]
RP   1-780
RX   DOI; 10.1099/vir.0.014423-0.
RX   PUBMED; 19759241.
RA   Alabi O.J., Martin R.R., Naidu R.A.;
RT   "Sequence diversity, population genetics and potential recombination events
RT   in grapevine rupestris stem pitting-associated virus in Pacific North-West
RT   vineyards";
RL   J. Gen. Virol. 91(Pt 1):265-276(2010).
XX
RN   [2]
RP   1-780
RA   Alabi O.J., Martin R.R., Naidu R.A.;
RT   ;
RL   Submitted (19-APR-2009) to the INSDC.
RL   Department of Plant Pathology, Irrigated Agriculture Research and Extension
RL   Center, Washington State University, 24106 N. Bunn Rd., Prosser, WA 99350,
RL   USA
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DR   MD5; 971e83845642ea336c320ed78d4e2555.
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FH   Key             Location/Qualifiers
FH
FT   source          1..780
FT                   /organism="Grapevine rupestris stem pitting-associated
FT                   virus"
FT                   /host="Vitis vinifera"
FT                   /isolate="ORCH1d"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Pacific Northwest"
FT                   /collection_date="Aug-2007"
FT                   /db_xref="taxon:196400"
FT   CDS             1..780
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:D2E8K3"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:D2E8K3"
FT                   /protein_id="ADA79752.1"
FT                   /translation="MASQIGKLPGESNEAFEARLKSLELARAQKQPEGSNTPPILSGVL
FT                   AKRKRVIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAFGESGIAENAQFDVA
FT                   IDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLE
FT                   TGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTKAEMVANIASFEVQ
FT                   VLRQAMAEGKRSSNLGEISGGTAGALINNPFSNVTHE"
XX
SQ   Sequence 780 BP; 237 A; 158 C; 204 G; 181 T; 0 other;
     atggcaagtc aaataggtaa actccccggc gaatcaaatg aggcatttga agcccggctg        60
     aaatcactgg agttggccag agctcagaag cagccagaag gctcaaatac accgcccatt       120
     ctcagtggtg tgcttgccaa acgtaaaagg gttattgaga atgcactctc aaagacagtg       180
     gacatgaggg aggtgttgaa acacgaaacg gttgtaatct ctccaaatgt catggatgag       240
     ggtgcaatag atgagctgat tcgtgcattt ggagaatcag gcatagctga gaacgcccaa       300
     tttgatgtgg ccatagatat agcacgtcac tgctctgatg ttggaagctc ccaaaggtca       360
     accctgattg gcaaaagtcc attctgtgat ctgaatagat cagaaattgc cgggattata       420
     agggaggtaa ccacattgcg cagattttgc atgtactatg caaaaatcgt gtggaatatc       480
     catctggaga cggggatacc accagctaat tgggccaaga aagggtttaa tgagaatgaa       540
     aaatttgcag cctttgactt cttcctggga gtcacagatg agagtgcgct tgaaccaaag       600
     ggtgggatca aaagagctcc aacaaaagct gagatggtcg ctaatatcgc ctcttttgag       660
     gttcaagtgc tcagacaagc tatggctgaa ggcaagcgga gttccaacct tggagagatt       720
     agtggtggaa cggctggtgc actcatcaac aaccccttct caaatgttac tcatgaataa       780
//