ID FJ882122; SV 1; circular; genomic DNA; STD; VRL; 2690 BP. XX AC FJ882122; XX DT 06-DEC-2009 (Rel. 103, Created) DT 06-DEC-2009 (Rel. 103, Last updated, Version 1) XX DE Maize streak virus isolate MSV-A_ZA_Let3_O14-1989, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2690 RX DOI; 10.1099/vir.0.015537-0. RX PUBMED; 19692547. RA Harkins G.W., Martin D.P., Duffy S., Monjane A.L., Shepherd D.N., RA Windram O.P., Owor B.E., Donaldson L., van Antwerpen T., Sayed R.A., RA Flett B., Ramusi M., Rybicki E.P., Peterschmitt M., Varsani A.; RT "Dating the origins of the maize-adapted strain of maize streak virus, RT MSV-A"; RL J. Gen. Virol. 90(Pt 12):3066-3074(2009). XX RN [2] RP 1-2690 RA Harkins G.W., Martin D.P., Monjane A.L., Shepherd D.N., Windram O.P., RA Owor B.E., Donaldson L., van Antwerpen T., Sayed R.A., Flett B., Ramusi M., RA Rybicki E.P., Peterschmitt M., Varsani A.; RT ; RL Submitted (02-APR-2009) to the INSDC. RL Electron Microscope Unit, University of Cape Town, Private Bag, Cape Town, RL WP 7701, South Africa XX DR MD5; 912aa0e7fc9f8b39d1301f86c65752a1. XX FH Key Location/Qualifiers FH FT source 1..2690 FT /organism="Maize streak virus" FT /host="maize" FT /isolate="MSV-A_ZA_Let3_O14-1989" FT /mol_type="genomic DNA" FT /country="South Africa" FT /lat_lon="23.89 S 30.43 E" FT /collection_date="1989" FT /db_xref="taxon:10821" FT CDS 157..462 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B2BX37" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B2BX37" FT /protein_id="ACZ04232.1" FT /translation="MDPQNALYYQPRVPTAAPTSGGVPWSRVGEVAILSFVALICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGGQAVDRSNPIPNLPAPPSQGNPGPFVPGTG" FT CDS 473..1207 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B6CZ91" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B6CZ91" FT /protein_id="ACZ04233.1" FT /translation="MSTSKRKRGDDSNWNKRVPKKKPSSAGLKRAGSKADRPSLQIQTL FT QHAGTTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADAAACRYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNTSWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1717..2535) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:D2E151" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D2E151" FT /protein_id="ACZ04234.1" FT /translation="MASSSSNRQFSHRNANTFLTYPKCPENPEIACQMIWELVVRWIPK FT YILCAREAHKDGSLHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKSVNRVRDYILKE FT PLAVFERGTFIPRKSPFLGKSDSEVKEKKPSKDEIMRDIISHATSKQEYLSMIQKELPF FT DWSTKLQYFEYSANKLFPEIQEEFTNPHPPSSPDLLCNESINDWLQPNIFQVSPEAYML FT LQPTCYTLEDAISDLQWMDSVSSHQMKDQESRASTSSAQQEPENLLGPEA" XX SQ Sequence 2690 BP; 691 A; 632 C; 692 G; 675 T; 0 other; taatattacc gcgccttctt ttcctgcgag ggcccggtag ggaccgagcg ctttgattta 60 aagcttggtc ctgctttgta tgatttatct aaagcagccc aatctaaaga aaccggtccc 120 gggcactata aattgcctaa caagtgcgat tcattcatgg atccacagaa cgccctgtat 180 tatcagccgc gggtacccac agcagctccg acatccggag gagtgccgtg gagtcgcgta 240 ggcgaggtag ctattttgag ctttgttgca ttgatttgct tttacctgct ttacctttgg 300 gtgctgagag accttatctt agttctgaag gctcgacaag gcagatccac ggaggagctg 360 atatttggtg gacaagctgt ggataggagc aaccctatcc ctaatctacc agcaccacca 420 agtcagggca atcccgggcc atttgttcca ggcacgggat aagcaatcag ccatgtccac 480 gtccaagagg aagcggggag atgattcgaa ttggaataag cgggtgccta agaagaagcc 540 atcttcagct gggctgaaga gggctggaag caaggccgat aggccatccc tccaaatcca 600 gacactccag catgcgggga ccaccatgat aacggtcccc tctggaggag tatgtgacct 660 catcaacacc tatgcccgag gatctgacga gggcaaccgc cacaccagcg agactctgac 720 gtacaagatc gccgtcgact accacttcgt tgccgacgcg gctgcctgcc gctactccaa 780 caccggaacc ggtgtaatgt ggctggtgta tgacaccact cccggcggac aagctccgac 840 cccgcaaact atatttgcct accctgacac gctaaaagcg tggccggcca catggaaagt 900 gagccgggag ctgtgtcatc gcttcgtggt gaaacggcga tggttgttca acatggagac 960 cgacggtcgg attggttcgg atatccctcc ctcgaataca agttggaagc cttgcaagcg 1020 caacatctac ttccacaagt tcacgagtgg gttgggagtg agaacgcagt ggaagaatgt 1080 aacggacgga ggagttggtg ccatccagag aggagcgctg tacatggtta ttgcccccgg 1140 caatggcctt acatttactg cccatgggca gacccgtctg tactttaaga gtgttggcaa 1200 ccagtaatga ataaaaacgc ccgttttatt atatctgatg aatgctgaaa gcttacatta 1260 atatgtcgtg cgatggcacg aaaaaacaca cgcaatcaat acaggggggt agtcggcggg 1320 cggctaaggg tggtgctcgg cgggcaaaac atcgaaaaat caagatctat atgaattaca 1380 cttcctccgt aggaggaagc acagggggag aataccactt ctcccccggc gacataatgt 1440 aaatgatgca gtttgcctcg aaatactcca gctgccctgg agtcatttcc ttcatccaat 1500 cttcatccga gttggcgagg attattgtag gcttagactt cttctgcacc tttttcttct 1560 taccatactt ggggtttaca atgaaatccc tctgacagcc aactaactgt ttccaacaag 1620 gacagaattt aaacggaata tcatctacga tgttgtagat tgcgtcttcg ttgtatgaag 1680 accaatcaac attattttgc cagtaattat gaacccctag gcttctggcc caagtagatt 1740 ttccggttct tgttgggccg acgatgtaga ggctctgctt tcttgatctt tcatctgatg 1800 actggataca gaatccatcc attgcaggtc agaaattgca tcctcgaggg tataacaggt 1860 aggttgaagg agcatgtaag cttcgggact aacctggaag atgttaggct ggagccaatc 1920 gttgattgac tcattacaaa gtaaatcagg tgaggagggt ggatgaggat tggtgaactc 1980 ttcctgaatc tcaggaaaaa gcttatttgc agagtattca aaatactgca attttgtgga 2040 ccaatcaaag gggagctctt tctggatcat ggagaggtac tcttgtttgg aggtagcgtg 2100 tgaaataatg tctcgcatta tttcatcttt agaaggcttt ttttccttta cctctgaatc 2160 agattttcct aggaaggggg acttcctagg aatgaaagta cctctctcaa acacagccag 2220 aggttccttg agaatgtaat ccctcactct gttaactgac ttggcactct gaatatttgg 2280 gtgaaaccca tttatatcaa agaaccttga gtcagatatc cttaccggct tctctgtctg 2340 aagcaatgca tgtaaatgca aacttccatc tttatgtgcc tctcgggcac atagaatata 2400 tttgggaatc caacgaacga cgagctccca gatcatctga caggcgattt caggattttc 2460 tggacacttt ggataggtga ggaacgtgtt tgcgttcctg tgtgagaact gacggttgga 2520 tgaggaggag gccatagccg acgacggagg ttgaggctga gggatggcag actgggagct 2580 ccaaactcta tagtatacct gtgcgccttc gaaatccgcc gctcccttgt tttatagtgg 2640 ttgtaaatgg gccggaccgg gccggcccag caggaaaaga aggcgcgcac 2690 //