ID FJ795758; SV 1; linear; genomic RNA; STD; VRL; 4223 BP. XX AC FJ795758; XX DT 05-OCT-2010 (Rel. 106, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Sweet potato feathery mottle virus isolate R70LUW polyprotein gene, partial DE cds. XX KW . XX OS Sweet potato feathery mottle virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-4223 RX DOI; 10.1111/j.1365-294X.2010.04682.x. RX PUBMED; 20609081. RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.; RT "Molecular genetic analysis of virus isolates from wild and cultivated RT plants demonstrates that East Africa is a hotspot for the evolution and RT diversification of sweet potato feathery mottle virus"; RL Mol. Ecol. 19(15):3139-3156(2010). XX RN [2] RP 1-4223 RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.; RT ; RL Submitted (25-FEB-2009) to the INSDC. RL Department of Applied Biology, University of Helsinki, P.O. Box 27 RL (Latokartanonkaari 7), Helsinki FIN-00014, Finland XX DR MD5; feb3510118d0d26c0be7755aee9c1101. XX FH Key Location/Qualifiers FH FT source 1..4223 FT /organism="Sweet potato feathery mottle virus" FT /host="Ipomoea acuminata" FT /isolate="R70LUW" FT /mol_type="genomic RNA" FT /country="Uganda:Luwero" FT /db_xref="taxon:12844" FT CDS <1..4002 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:E1U7K0" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="UniProtKB/TrEMBL:E1U7K0" FT /protein_id="ACY74490.1" FT /translation="GATSCVLHQTKDALSKHLRLKGVWNKSVITQDLFILAGVFAGGLW FT MIMAGLKESFDQTVLHQGKEKRQMQKLKFRKARDNKLGFEVHADDGTIEHFFGSAYTKK FT GKQKGKVTGMGSKNRKFINMYGFDPTEYSFVRFVDPLTGAVIDDSPYTDILLVQEKIGE FT ARLNAIKEDELSREKVAQNPGIHAYYVNEITNAALKVDLTPHNPLLACERHSTIAGHPE FT YEGVLRQTGPPIKMTLTDVPVNPEEASLVGHESKSLFRGLRDYNPIASVICHLMNEADG FT RTSDCFGIGYGGLIITNRHLFKRNNGTLTIKSRHGEFVIKNTTQLGMKPCADRDILIIR FT MPKDIPPFPQRLKFRVPKENERICLVGSNFQDKSITSTISETSVTCHVPNSHFWKHWID FT TKDGHCGLPLVSTTDGALLGVHSLSNLTNTQNFFASFPENFEVDYLKTPEAMDWIKKWS FT YNPDEICWGTLELKTGQPVAPFKVSKLITDLEGIQVYAQTRSDRWVQDRLHGNLKAVGR FT CPAQLVTKHVVKGKCMLFDLYLQQDQSEREYFKPLMGAYGKSKLNKEAYNKDLFKYATQ FT IQAGDVQVDTFELAERSVVSMLTSKGFEKCSYITDPEEILKALNMKAAVGAMYSGKKKD FT YFEGMSDHDVENHLFHSCKRLFMGHKGLWNGSLKAELRPMEKVELNKTRTFTAAPLDTL FT LGGKVCVDDFNNMFYNHHLKCPWTVGITKFYQGWDRLLTSLPEGWVYCDADGSQFDSSL FT SPYLINSVLNIRREFMEDWDVGDQMLRNLYTEIVYTPILTPDGTIVKKFKGNNSGQPST FT VVDNTLMVVLAVHYTLLKLGIQESEFDKCCVFFANGDDLLLAMRPDTAHLLDKFGECFS FT ELGLNYDFSSRTNKKEDLWFMSHCGVKRDGIFIPKLEPERIVTILEWDRSHEPIHRLEA FT ICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELARNGKAPYIAETALKALYTGVQPNA FT SELSAYTRVLKEMYDDSMLQENDLEVYHQSNERTEFKDAGADPPAPKPKNVPPPPTITE FT ITDPEDPKQEALKAARAKQPAVIPESYGRDTSKERESIVGASSKGVRDKDVNVGTVGTF FT VVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQFEVANTRSTQEQFQAWYEGVKGDY FT GVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIM FT THFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHLQ FT MKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVTRNIHNLLGMRGVQ" FT mat_peptide <1..27 FT /product="cytoplasmic inclusion protein; CI" FT mat_peptide 28..186 FT /product="6K2 protein" FT mat_peptide 187..762 FT /product="VPg protein" FT mat_peptide 763..1491 FT /product="NIa-Pro protein" FT mat_peptide 1492..3054 FT /product="nuclear inclusion body; NIb" FT mat_peptide 3055..3999 FT /product="coat protein; CP" FT 3'UTR 4003..4223 XX SQ Sequence 4223 BP; 1369 A; 771 C; 978 G; 1105 T; 0 other; ggagccacct cttgtgtgct tcatcaaaca aaagatgcac tctcaaagca ccttcgtttg 60 aaaggagtgt ggaataaatc agtcatcaca caggatttgt tcattttagc aggggtattt 120 gctggtggtt tgtggatgat aatggcgggg ctaaaggaat catttgatca aactgtgctg 180 caccaaggaa aagaaaagcg ccaaatgcaa aagctgaagt ttaggaaagc gcgagataat 240 aaacttggat tcgaagtaca cgctgatgat ggaactatcg aacacttctt tggtagtgca 300 tacaccaaga aagggaaaca aaaaggaaag gttactggaa tgggatcaaa gaacaggaaa 360 tttataaaca tgtacggatt tgatcccact gaatattcct ttgtccgatt tgttgacccg 420 ctaactggag ctgtgataga tgattctcca tatacagata ttcttcttgt tcaggagaag 480 attggtgagg ctcgtttgaa tgccatcaaa gaagatgaac tttcaagaga gaaagttgca 540 caaaatccag gaattcatgc atactatgtc aatgaaatca caaatgctgc actcaaagtt 600 gatcttacac cgcacaatcc attacttgca tgtgaaagac atagcaccat tgccggtcat 660 cctgaatatg aaggagtttt gagacaaacc ggacccccaa ttaagatgac acttactgac 720 gtgccagtaa atcctgaaga ggcaagttta gtcgggcatg agagtaagtc actattcaga 780 ggcttaaggg attacaaccc aatagcaagt gttatatgtc acctaatgaa tgaagcggat 840 gggagaacaa gcgactgctt tggaatcgga tacggtggtc tcattataac aaataggcat 900 cttttcaaaa ggaacaatgg cacattaaca attaaatctc gacatggaga atttgttatc 960 aagaacacaa cccaacttgg gatgaaacct tgtgctgaca gagacatact catcattagg 1020 atgcctaagg atatacctcc gtttccacaa cgcctgaaat ttagggttcc aaaagaaaat 1080 gaaagaatct gcttggttgg atcaaatttt caggataaat caatcacaag tacgatttct 1140 gaaaccagcg taacgtgcca tgtgccaaat tcgcattttt ggaagcactg gatcgataca 1200 aaagatggac attgtggtct tcccttagta agtactactg atggtgcttt gttgggagtg 1260 catagcctat caaatttgac gaacactcag aatttctttg catcatttcc tgagaacttt 1320 gaagtggact atttgaaaac tcctgaggca atggattgga taaagaagtg gagttataat 1380 ccagatgaaa tttgttgggg aacgctggaa ctgaagacag gacaacccgt tgccccattc 1440 aaagtgtcca aactaatcac ggacttagaa ggcatacaag tgtatgctca aacaaggtca 1500 gatagatggg ttcaagatag actacatggc aatcttaaag cagttggtcg atgtcctgca 1560 caattggtta ctaagcacgt tgtaaaggga aaatgcatgc tatttgacct atatttgcag 1620 caagatcaat ctgaaaggga gtatttcaaa cctcttatgg gagcatacgg gaaaagtaag 1680 ctcaacaaag aggcgtataa taaggatttg tttaagtatg cgacacaaat tcaggcagga 1740 gatgtgcaag tggatacgtt cgaattggcg gaaagatctg ttgtttccat gctcacatca 1800 aaaggatttg aaaagtgcag ctacatcaca gatccagagg aaattctgaa agcactgaat 1860 atgaaagctg cagtcggtgc gatgtacagt ggaaagaaga aggattactt tgaaggaatg 1920 agtgatcacg atgtagaaaa ccatcttttc cacagttgca agcgtttgtt catgggacac 1980 aaaggtcttt ggaatggatc cttgaaagct gagttgagac ctatggaaaa agtggaactt 2040 aacaaaacaa gaaccttcac agcggctcct cttgacacgt tacttggtgg taaggtgtgt 2100 gtagacgatt tcaataacat gttttacaac caccatttaa aatgtccatg gacggtagga 2160 ataaccaaat tctaccaagg atgggatagg cttctcacat ctctacctga gggatgggtt 2220 tattgtgacg ctgatggctc gcaatttgat agttctctct ctccatattt gattaactca 2280 gttcttaata taagaagaga atttatggag gattgggatg ttggtgatca aatgcttcgg 2340 aatttataca cagaaatagt gtacacacca atactgacac cagatggaac catagtgaag 2400 aagttcaaag gtaacaacag tggacagcca tccactgtgg ttgataatac acttatggtt 2460 gtgttagcag ttcactacac tctactgaaa ctaggaatcc aagaaagcga gtttgataaa 2520 tgctgtgtct ttttcgcaaa tggcgatgat ttattattgg caatgaggcc agatacagcc 2580 catttactgg ataagtttgg tgaatgtttt tctgaattag gactcaatta tgacttttca 2640 tcacgaacaa ataagaagga agatctatgg tttatgtcac actgtggcgt gaaacgtgat 2700 ggaatattta ttccgaagtt ggagcctgaa aggattgtta caattcttga atgggaccgt 2760 tcacacgagc caattcaccg actggaagca atatgtgccg cgatggtgga atcatggggt 2820 tatgatgaac ttcttcatca tattaggaaa ttttatgcat gggttttgga ccaagcccca 2880 tacaatgaac tagcacggaa tggaaaagca ccatacatag ctgaaaccgc actcaaagca 2940 ctctatactg gtgttcaacc taatgcctct gaattgagtg cgtatacgag agtgctcaaa 3000 gaaatgtatg atgacagtat gctccaagag aatgatttgg aagtatatca tcaatctaat 3060 gaaagaactg aatttaaaga tgcaggagcg gaccctccag cccctaagcc taagaacgtt 3120 cctccaccac ccacaataac tgagatcact gatccagagg acccgaagca ggaagctttg 3180 aaagctgcac gagcaaaaca acccgcagtc attccagagt catatggacg agacacgagc 3240 aaagaaaggg agtcaatagt gggggcatca tcgaagggtg tgagggataa agatgtgaat 3300 gttggcaccg ttggtacatt tgttgtgcca cgtgtcaaga tgaatgcaaa taagaaaagg 3360 caaccaatgg tcaatggaag ggccattata aatttccagc acttgtcaac atatgaacca 3420 gagcaatttg aggttgcaaa cacccggtca actcaagaac agttccaagc atggtatgaa 3480 ggagttaaag gggattatgg tgttgacgac acaggaatgg ggatcttatt gaatggacta 3540 atggtttggt gcattgaaaa tggcacatcc ccaaatataa atggtgtgtg gacaatgatg 3600 gatggtgatg aacaagtaac atatccaatt aaaccattac tggaccatgc agtgcctact 3660 tttaggcaga tcatgacgca cttcagtgac gttgctgaag cttacataga gatgcgaaac 3720 cgtacaaagg catacatgcc aaggtatggt ctacaacgta atttgactga tatgagtctt 3780 gcgcgatatg catttgattt ttacgagctg cattcaacta cacctgcacg tgctaaagaa 3840 gcacatttac agatgaaggc agccgcactc aagaatgcgc gaaaccggtt gtttggttta 3900 gacggaaacg tctctacgca agaagaagat acggagaggc acacgacaac tgatgttact 3960 agaaatatac ataacctctt aggaatgagg ggtgtgcaat aggacatcct ctgcactgta 4020 gcttatattt atgttatctt tagtatgcct ttaatttaaa ttcgtgtctt tcagtcccga 4080 aggagatggt tgaatgcata acatggtggg attatatctc ggttattgca tttgagaagt 4140 cgcctttcta ttacgtatca taagggactc ttaaaagtga ggaatacctc gtaagaaaag 4200 cctttttggt tcgtgatcga gcc 4223 //