ID FJ795749; SV 1; linear; genomic RNA; STD; VRL; 5025 BP. XX AC FJ795749; XX DT 05-OCT-2010 (Rel. 106, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Sweet potato feathery mottle virus isolate ARU59b polyprotein gene, partial DE cds. XX KW . XX OS Sweet potato feathery mottle virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-5025 RX DOI; 10.1111/j.1365-294X.2010.04682.x. RX PUBMED; 20609081. RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.; RT "Molecular genetic analysis of virus isolates from wild and cultivated RT plants demonstrates that East Africa is a hotspot for the evolution and RT diversification of sweet potato feathery mottle virus"; RL Mol. Ecol. 19(15):3139-3156(2010). XX RN [2] RP 1-5025 RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.; RT ; RL Submitted (25-FEB-2009) to the INSDC. RL Department of Applied Biology, University of Helsinki, P.O. Box 27 RL (Latokartanonkaari 7), Helsinki FIN-00014, Finland XX DR MD5; b372aa8a7bcc8cc7e3157a388b42ada0. XX FH Key Location/Qualifiers FH FT source 1..5025 FT /organism="Sweet potato feathery mottle virus" FT /host="Ipomoea stenobasis" FT /isolate="ARU59b" FT /mol_type="genomic RNA" FT /country="Uganda:Arua" FT /db_xref="taxon:12844" FT CDS <1..4803 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:E1U7J1" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR013648" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:E1U7J1" FT /protein_id="ACY74481.1" FT /translation="RIGYTEKGLVDIPQTVATEAAFLCFAYGLPVMTPNVSTSLLGSCT FT VKQARTMLQFELTPFYMVNMVRFDGSMHHAIHQLLKRYKLRDAETTLNKLAIPNRGITG FT WISAADYRKVGQRLDIEDQVRIPFYHQSMPEKLHSDIWEAIQRYKHEAGFGRVSCINSC FT KIAYTLQTDVYAIPRTIKILDALIADEMRKKEHYKTITGRTVSSSSFTLNSIATLWRNR FT YAQDYTSENIAVLSSARAQLLEFENLSMDASYNEMSKGILETYVRENGATTCVLHQTKS FT DLAKHLQLKGIWNKSVITQDLLVLAGVFVGGIWMVFSGAKESFEQTVRHQGKEKRQRQK FT LKFRQARDRKQGFEVHADDGTIEHYFGSAYTAKGKQKGKVTGMGAKNRKFINMYGFDPT FT EYSFVRFVDPLTGLVFDDSPYTDIQLVQEKIGDARHKAILEDKLSRERISYNPGVSAYY FT INEITNAALKVDLTPHNPLLACERHNTIAGHPDHEGELRQTGSVVKVDIRDVPESPEEV FT SLVGHESKSLFRGLRDYNPIASVICHLVNEADGRTSDSYGIGYGGLIITNRHLFKRNNG FT TLTIRSRHGEFVIKNTTQLGMKPCADRDILIIKMPKDIPPFPQRLQFRIPKENERICLV FT GSNFQDKSITSTVSETSVTCHVPNSHFWKHWIDTKDGHCGLPLVSTVDGAILGVHSLSN FT LTNTQNFFAAVPANFEIDYLKTPEATEWIKKWSYNPSEICWGTLELKTGQPVAPFKVTK FT LITDLDSMQEYAQARSDKWVLDRLYGNLKAVGQCPAQLVTIHIVKGKCMLFDLYLQQDC FT DVRSFFKPLMGAYGKSRLNKEAYNKDLFKYATPINAGDVCHKTFEQAELAVVEMLRANG FT FHKCNYITDPEEIVKALNMKAAVGAMYSGKKKDYFDGMSDKDIEDLLFHSCKRLYMGQK FT GLWNGSLKAELRPMAKVELNQKRTFTAAPLDTLLGGKTCVDDFNNMFYNNHLKCPWTVG FT ITKFYQGWDRLLTSLPENWIYCDADGSQFDSSLSPYLINAVLNIRREFMEEWDIGDQMI FT RNLYTEIVYTPILTPDGTIVKKFKGNNSGQPSTVVDNTLMVVLAVYYTLLKLGVSEFEI FT SERCVFFANGDDLLIAMRPDTAHLLDSFSECFAELGLNYDFSSRTTKKEELWFMSHCGI FT KRDGMYIPKLEPERIVSILEWDRSHEPVHRLEAICAAMVEAWGYDELLHQIRKFYAWVL FT GQAPYSELARTGKAPYIAETALKSLYTGVQPSADDFSEYTRVLNEMYDDSLLQDNDLSV FT YHQSGNPSEFKDAGANPPEPKPKGPYTAPEITEVTEPEDPKQAALREARQKQPAVIPES FT YGRDTGEKPMRSVSPQRVKDKDVNVGTTGTFVVPRVKLHTSKMRQPRINGISVVNLQHL FT ATYEPEQHNIGNTRSTQEQFRAWYEGVKGDYGVDDAGMAILLNGLMVWCIENGTSPNIN FT GVWTMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQR FT NLTDMSLARYAFDFYELHSTTPARAKEAHMQMKAAALKNAHNRLFGLDGNVSTQEEDTE FT RHTATDVTRNIHNLLGMRGVQ" FT mat_peptide <1..834 FT /product="cytoplasmic inclusion protein; CI" FT mat_peptide 835..993 FT /product="6K2 protein" FT mat_peptide 994..1569 FT /product="VPg protein" FT mat_peptide 1570..2298 FT /product="NIa-Pro protein" FT mat_peptide 2299..3861 FT /product="nuclear inclusion body; NIb" FT mat_peptide 3862..4800 FT /product="coat protein; CP" XX SQ Sequence 5025 BP; 1579 A; 962 C; 1186 G; 1298 T; 0 other; cgtatcgggt acacagaaaa aggtttagtt gacatacctc aaacagttgc gactgaggca 60 gcatttctgt gttttgctta tgggttacca gtcatgacac caaatgtgtc cacaagtctt 120 cttggttcgt gtaccgtcaa gcaggcgcga actatgctac aatttgagtt aactccattc 180 tacatggtga atatggttcg gtttgatgga tctatgcacc acgcaattca ccaactcctc 240 aaaaggtata agctcagaga tgcagaaaca acgctcaata agttggcaat tcccaacaga 300 gggattacag gatggatctc agcagcagat tacaggaaag tggggcaacg gttggatatt 360 gaagatcaag tcagaatacc cttttatcac caatcaatgc cagagaaatt gcatagtgat 420 atctgggaag caattcaaag atacaaacat gaagctggat tcggtcgcgt ttcatgtatc 480 aactcatgca aaattgccta cacacttcaa acagacgtgt atgctatccc ccgcactatc 540 aagatcctgg acgcactgat tgctgatgag atgaggaaaa aggagcacta caagacaata 600 acaggtagaa ctgtttcaag cagtagcttc actttaaatt caatcgcaac actgtggagg 660 aatagatacg cacaagatta cacaagtgag aacatagctg tactatcatc agccagagca 720 caactcctcg aatttgaaaa tttgagtatg gatgcctcat ataacgaaat gagcaaagga 780 attcttgaaa cgtatgtgcg tgagaatggt gccaccactt gtgtattgca ccaaacaaag 840 agtgatctcg cgaagcatct acagctcaag ggcatttgga ataaatccgt gataacacaa 900 gatttactgg tactagcagg agtttttgtt ggtggtatat ggatggtgtt ttcgggtgca 960 aaagaatctt ttgaacagac agttagacac caaggtaaag agaaaagaca aaggcaaaag 1020 ttgaagttcc ggcaggctcg tgataggaaa caaggttttg aagttcacgc agatgatggc 1080 acaattgaac attactttgg aagtgcttat actgcgaaag gaaaacagaa aggaaaggtt 1140 acgggtatgg gggcaaagaa taggaagttc ataaatatgt atggcttcga cccgactgaa 1200 tattcttttg tgagatttgt ggacccactg acaggattgg tgtttgatga ctcaccatac 1260 acagatattc aactggttca agaaaagatt ggtgatgcga gacataaggc aatacttgag 1320 gataagctct cccgagagag aatatcatac aatcctggag ttagtgcata ttatatcaat 1380 gagattacaa atgcggcatt gaaggtagat ctcacaccac ataacccatt acttgcatgt 1440 gagagacata acacaatagc tggacaccca gatcacgagg gtgagttacg acagaccggc 1500 tccgttgtta aagttgatat tagagatgtg ccggagagcc cagaagaggt atcacttgtg 1560 ggacatgaga gcaaatccct ttttaggggt ttgagggact ataatccaat tgcaagtgtg 1620 atatgccatt tagtgaatga agcagatggt aggacaagtg attcatatgg tattggatat 1680 ggtggtctaa ttattacgaa tagacatcta ttcaagcgta ataatggaac tctcacaata 1740 cgctcgcgac atggggaatt cgtgattaag aacaccactc aactgggcat gaaaccatgt 1800 gctgaccgtg acatattaat aataaagatg cccaaagata tcccaccttt tccacagaga 1860 cttcagttta ggattcccaa ggagaatgag cgcatttgtc tagtgggttc gaacttccaa 1920 gacaaatcta tcacaagcac tgtctctgag acgagtgtca catgtcatgt accaaattca 1980 catttttgga agcattggat agatacaaaa gacgggcatt gtggcttacc tcttgtaagc 2040 acagttgatg gtgcgattct tggggttcat agtttgtcaa atctcacaaa cactcaaaac 2100 ttctttgcag ccgtccccgc aaactttgag attgattacc ttaaaacacc tgaggctact 2160 gaatggatta agaaatggag ttacaacccg agcgaaatct gctgggggac tttggaactt 2220 aagacaggac agccagttgc accttttaaa gtcaccaagt tgataacaga tcttgacagc 2280 atgcaagagt atgctcaagc gcgctcggac aaatgggtgc tagataggtt gtatggaaat 2340 ttgaaagctg tgggtcagtg tccagcacag cttgttacaa tacatattgt gaagggaaag 2400 tgtatgcttt ttgatttgta tctccaacaa gattgcgatg ttagaagctt tttcaaacct 2460 ttgatggggg catatgggaa gagcagatta aataaggaag catacaacaa ggatttattc 2520 aagtatgcaa ctccaatcaa tgcaggggat gtgtgtcaca aaacatttga gcaggcagaa 2580 ctagcagttg tcgagatgct cagagcgaat ggttttcata agtgtaatta cattacagat 2640 ccggaggaaa ttgtcaaggc actcaacatg aaagcagctg tcggagcaat gtatagtgga 2700 aagaagaaag actattttga tggtatgagc gacaaggata tcgaggatct tctttttcac 2760 agttgtaagc ggttgtacat ggggcagaaa ggactttgga atggctcctt aaaggctgag 2820 ctcaggccca tggcaaaagt tgaattgaac caaaaaagaa cttttacagc ggccccactt 2880 gacacacttt tgggtggtaa aacatgtgtt gatgatttca acaacatgtt ttacaacaac 2940 catctcaagt gcccatggac agtaggcatc acaaaattct atcaaggatg ggatagattg 3000 ttaacatctt tgcctgaaaa ttggatttat tgtgatgcag atggttctca atttgacagc 3060 tctttgtcac cctatcttat taatgctgtc ctcaatatac ggagggaatt catggaagaa 3120 tgggacatag gggatcaaat gatccgaaat ctgtacacag aaattgtata cacgccgatc 3180 ctaaccccag atggaaccat agtgaagaag ttcaaaggaa acaacagtgg gcaaccatca 3240 accgtcgtgg acaatacact tatggttgtg ttggccgtct actacacttt gttgaaatta 3300 ggtgtttcag agtttgagat cagtgaacga tgtgtattct ttgcaaatgg ggatgatcta 3360 ctgatagcta tgagaccaga tacagctcat cttttggata gtttcagcga gtgctttgct 3420 gagcttgggc ttaactacga cttctcatca aggacaacca agaaagagga attatggttc 3480 atgtctcact gtggaatcaa acgagatgga atgtacattc ccaaacttga gcctgaacga 3540 atagtatcta ttcttgaatg ggatagatca catgagcctg tacatagact tgaagcaatt 3600 tgtgctgcaa tggtggaagc gtggggctac gatgaactcc tccaccaaat tagaaaattt 3660 tatgcatggg tcttaggaca agcaccatat agtgaactag cacgaactgg aaaggcccca 3720 tatattgctg aaactgcact taaatcattg tacactggag tacaacctag cgctgacgat 3780 ttcagcgagt acacgcgtgt tcttaacgag atgtatgatg atagccttct ccaagacaat 3840 gacttatcgg tgtatcatca atctggcaat ccctctgaat ttaaagatgc gggtgcaaac 3900 ccacccgaac caaaaccaaa agggccatat acagcaccag aaatcacaga ggttactgag 3960 ccggaggatc ccaaacaagc cgcgcttcgc gaagctagac agaaacaacc tgctgtcata 4020 cccgaatcat acggtaggga cacaggcgag aaacctatgc gctctgtctc accacaaagg 4080 gtaaaggaca aggatgtcaa cgttggcacg acaggcacat ttgtggtgcc acgagttaag 4140 ctccatacta gcaaaatgcg gcaacctaga atcaatggaa tctctgtagt aaacttacaa 4200 cacctcgcaa cttatgaacc tgagcaacat aacattggga atacacgctc aactcaggaa 4260 cagttccgag catggtatga aggtgttaag ggtgattatg gtgttgatga tgctggaatg 4320 gcaatcttgt tgaatggatt gatggtatgg tgcatagaga atggaacatc tccaaatata 4380 aatggcgttt ggacgatgat ggatggggat gaacaagtga cgtaccccat aaagccatta 4440 ctggatcatg cagtgcctac ttttaggcaa atcatgacac acttcagtga cgttgctgaa 4500 gcgtatatag aaatgagaaa tcgcaccaag gcatatatgc ctaggtatgg attacaacgt 4560 aacttgactg atatgagtct tgcgcgatat gcatttgatt tttatgagct gcactcaaca 4620 acacccgcac gtgctaaaga agcacacatg cagatgaaag cagctgcact taagaatgcg 4680 cataatcggt tgtttggttt ggatggaaac gtctccacgc aagaagagga tacggagagg 4740 cacactgcga ctgatgttac taggaacata cataacctct taggaatgag gggtgtgcag 4800 taggtgaaac tttgcactgt atttatttac ttatgtggtt tttagtatgc ctttatttta 4860 attcgtgtcc ttcagtcccg acagagatgg ttgggtgtat cggcggagtg ggcttttagc 4920 ctggtctata cactcgagaa gtttctggtc tattacgtat cataagggac tcttaaaagt 4980 gaggagtacc tcgtaagaaa agcctttttg gttcgtgatc gagcc 5025 //