ID FJ713524; SV 2; linear; genomic RNA; STD; VRL; 2190 BP. XX AC FJ713524; XX DT 15-MAR-2009 (Rel. 100, Created) DT 23-OCT-2009 (Rel. 102, Last updated, Version 2) XX DE Mertensia leaf curl virus isolate NTR8 replication-associated polyprotein DE (RP) gene, partial cds; and coat protein (CP) gene, complete cds. XX KW . XX OS Mertensia leaf curl virus OC Viruses; Riboviria; Tymovirales; Tymoviridae; unclassified Tymoviridae. XX RN [1] RP 1-2190 RA Robertson N.L.; RT "A new tymovirus isolated from an indegenous Boraginaceae plant species in RT south central Alaska"; RL Unpublished. XX RN [2] RP 1-2190 RA Robertson N.L.; RT ; RL Submitted (06-FEB-2009) to the INSDC. RL Agricultural Research Service, United States Department of Agriculture, 533 RL E. Fireweed Ave., Palmer, AK 99645, USA XX RN [3] RC Sequence update by submitter RP 1-2190 RA Robertson N.L., Brown K.L.; RT ; RL Submitted (21-OCT-2009) to the INSDC. RL Agricultural Research Service, United States Department of Agriculture, 533 RL E. Fireweed Ave., Palmer, AK 99645, USA XX DR MD5; fd84b927eab5503fe7b28ff863e0dc10. DR RFAM; RF00233; Tymo_tRNA-like. XX CC On Oct 21, 2009 this sequence version replaced gi:224755429. XX FH Key Location/Qualifiers FH FT source 1..2190 FT /organism="Mertensia leaf curl virus" FT /host="Mertensia paniculata" FT /isolate="NTR8" FT /mol_type="genomic RNA" FT /country="USA:N. Trunk Rd." FT /collection_date="05-Jul-2006" FT /db_xref="taxon:620841" FT gene <1..1530 FT /gene="RP" FT CDS <1..1530 FT /codon_start=1 FT /gene="RP" FT /product="replication-associated polyprotein" FT /note="RNA-dependent RNA polymerase" FT /db_xref="GOA:D0QPK4" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:D0QPK4" FT /protein_id="ACX94288.1" FT /translation="FTHHTPVYPGENFETLASHFLPAHDPDIKEILWKDQASSQFAWFD FT RPFELSCQPSSLLAPKHSPSSDPTLLPASISKRLRFRPSSHPHSLTSQDVILGNILYSS FT LCRAYSRSPTSSVPFNPTLFADCISLNEYAQLSSKTKATIVANHARSDPDWRHTVVKIF FT AKAQHKVNDGSIFGDWKACQTLALMHDYVILTLGPVKKYQRLFDASDRPSHIYTHCGKS FT PRDLSLWCQNHLSDSVKYANDYTAFDQSQHGESVILEALKMKRLNIPSHLILLHIHLKT FT HVETQFGPLTCMRLTGEPGTYDDNTDYNLAVIYSQFEMKSTPVAVSGDDSLLDSLPPER FT AEWPIISQFLHLRFKPELTLHPLFCGYFAGKNGAVRNPLAVFAKLMIAWDDSALEERRL FT SYLTEFATGHLLGDSFWNVIPPSHRIYQSACFDFFCRFAKKHEKELLSSEPFSPSSLQK FT ITSSIRWLSKQALSSLPLSILRKLSNTSSFPNHPDNPEVSQLESELLPSLQ" FT gene 1539..2105 FT /gene="CP" FT CDS 1539..2105 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:C0LJR6" FT /db_xref="InterPro:IPR000574" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:C0LJR6" FT /protein_id="ACN62330.1" FT /translation="MEIEGVLAPQPSINTKPSLLPPITGSAPPAISYPFQVTIASLGMA FT DGADSVSIASSSVIANYTSLYRHAVLKNLKATIHPNLTAPAFPTSVSLVWVPANSVATP FT QDILNVYGGQCFCIGGTINSVSPLEVPANLTNLNSTVKASTTFTDTPKLLYSSTAQTTA FT PTKPTCYLTISGVVELSSPLLQASQ" XX SQ Sequence 2190 BP; 485 A; 774 C; 382 G; 549 T; 0 other; ttcactcacc acaccccagt ttaccccggc gagaattttg agactcttgc gtctcacttc 60 cttccagccc atgatcctga catcaaggaa attctctgga aggaccaagc gagctcccag 120 tttgcctggt ttgacagacc atttgagctc tcctgtcagc cctctagcct cctcgccccc 180 aaacactccc catcttctga ccccaccctg ctcccagcct ccatatccaa gcgtctccgc 240 ttcagaccct cctcccaccc ccactccttg acctctcagg atgtcatcct cggcaacatt 300 ctgtattcct ctctttgccg agcctattcc agaagcccga caagctcggt cccattcaat 360 cctaccctct ttgctgactg catctccctc aacgagtatg cacaactttc ctcaaagacg 420 aaagccacaa tcgttgccaa ccacgctcgc tctgaccctg attggcgaca cacagtggtt 480 aaaatctttg ccaaagctca gcacaaagtc aatgatggat caatctttgg agactggaaa 540 gcatgtcaga ccctggcctt gatgcatgat tatgtcatcc tcaccctcgg ccccgtcaag 600 aagtaccaac gcctctttga cgcatctgac agaccttccc acatttacac tcattgtggc 660 aaatccccaa gagatctctc tctgtggtgt caaaatcacc tgtccgactc ggtcaagtac 720 gccaatgact acactgcctt tgaccagtcc cagcacggag aatctgtcat cttagaggct 780 ttgaaaatga agcgcctcaa cattccatcc catctcatac tcctccacat ccatctcaaa 840 actcatgttg agacccagtt tggtcccctg acctgcatgc gtctgaccgg tgagccaggc 900 acttatgatg acaacactga ttacaatctt gctgtcatct actcccagtt tgagatgaaa 960 tccactcccg tcgctgtatc cggcgatgac tccctccttg actcactccc tcccgagaga 1020 gctgaatggc ccatcatttc ccagtttctc catctcagat tcaaacctga gctgactctc 1080 cacccactct tctgcgggta ttttgccggg aaaaatggtg ctgtccgcaa tcctctcgcg 1140 gtctttgcca aactcatgat agcttgggac gactctgccc tagaggaacg aaggctgagt 1200 tacctcactg agtttgccac tggtcacctc ctcggggatt ctttctggaa tgtgatccct 1260 ccttctcatc gcatttacca gagtgcctgc tttgacttct tctgccgttt cgccaagaaa 1320 catgaaaaag agctcctctc ctctgagccc ttcagtcctt cctctcttca gaagatcacc 1380 tccagcatcc gctggctgtc caagcaagcc ctcagctctc tccccctttc catcttgaga 1440 aagctctcca acacctcctc cttcccaaac caccccgaca atcccgaggt ttcccagcta 1500 gagtctgaat tgcttccctc tttgcaatag actcgatcat ggaaattgaa ggcgtcctag 1560 ctcctcaacc ctccatcaac accaagccct ctcttctccc acccatcact ggatctgcac 1620 cacccgcaat ctcttacccc ttccaagtga caatagcatc tctaggcatg gccgacggag 1680 ctgattccgt cagcattgcc tccagttctg ttattgctaa ctacacctcc ctctaccggc 1740 atgccgtctt gaagaatctc aaggctacca tccaccccaa cctcactgct ccggctttcc 1800 cgaccagtgt ttcccttgtc tgggtcccgg caaactctgt cgccaccccg caagacattc 1860 tcaacgttta cggaggccag tgcttctgca ttggtggcac catcaactcc gtgagccctc 1920 ttgaggttcc agccaacctt accaacctca actccacagt caaggcttca accaccttca 1980 ctgatacccc caaacttctc tactcttcca ccgcgcagac aactgcgcca accaaaccca 2040 catgctacct caccatctca ggtgtcgtag aactctcctc tcctcttctt caagcctctc 2100 agtaggctca ggtcgccagt gcgacaccca ttcacacaca atgggcattg gggtgcaact 2160 cccccgtcta tcctgaacgt catcaggtcc 2190 //