ID FJ712190; SV 1; circular; genomic DNA; STD; VRL; 2813 BP. XX AC FJ712190; XX DT 13-APR-2009 (Rel. 100, Created) DT 13-APR-2009 (Rel. 100, Last updated, Version 1) XX DE Alternanthera yellow vein virus segment A, complete sequence. XX KW . XX OS Alternanthera yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2813 RA Wu Z.; RT "Molecular characterization of Alternanthera yellow vein virus isolated RT from fujian"; RL Unpublished. XX RN [2] RP 1-2813 RA Wu Z.; RT ; RL Submitted (05-FEB-2009) to the INSDC. RL Institute of Plant Virology, Fujian Agriculture and Forestry University, RL Kingshan Road, Fuzhou, Fujian 350002, China XX DR MD5; 3a83c9d5087e9018967d143cb2fde10e. XX FH Key Location/Qualifiers FH FT source 1..2813 FT /organism="Alternanthera yellow vein virus" FT /segment="A" FT /host="Alternanthera philoxeroides" FT /isolate="Fujian" FT /mol_type="genomic DNA" FT /country="China:Yong'an" FT /collection_date="Aug-2008" FT /db_xref="taxon:337826" FT gene 154..501 FT /gene="AV2" FT CDS 154..501 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /note="precoat protein; Gemini-V1 superfamily" FT /db_xref="GOA:C1JYG9" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:C1JYG9" FT /protein_id="ACO53443.1" FT /translation="MWDPLLNPFPQTVHAFRCMLSVKYLQAVEDTYAPDTLGADLIREL FT IAVIRANNYVEACSRYDHFIKRVEGTTSAQLRQPYGSPCYCPHCPCHSKTAVVEPPHVS FT QAKVVPNVQKS" FT gene 314..1084 FT /gene="AV1" FT CDS 314..1084 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /note="capsid protein; Gemini-coat superfamily" FT /db_xref="GOA:A1XI78" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A1XI78" FT /protein_id="ACO53441.1" FT /translation="MSKRAADMIISSSGSRVRRRLNFDSPMARRATAPIVRATRKQQWS FT SRPMYRKPRLYRMYRSPDVPYGCEGPCKVQSFEKKHDVSHTGTLLCVSDVTRGSGITHR FT VGKRFCIKSIYIIGKIWMDENIKSKNHTNTVMFWLVRDRRPVTTPYGFGEAFNMYDNEP FT STATIKNDLRDRLQVLHRFSATVTGGQYASKEQAMIKRFWRINNHVVYNHQEKAAYENH FT TENALILYMACTHASNPVYATLKIRIYFYDSVMN" FT gene complement(1267..1554) FT /gene="AC3" FT CDS complement(1267..1554) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /note="Gemini-AL3 superfamily" FT /db_xref="GOA:C1JYH1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C1JYH1" FT /protein_id="ACO53445.1" FT /translation="MDSRTGEYITAAQAENGVYTWEITNPLYFKIIKHDSRPFLREHDI FT ITVQIQFNYNMRKALGIHKCFLTCQIWTRLQPQTLSFLRVFKTQVMKYLR" FT gene complement(1295..1699) FT /gene="AC2" FT CDS complement(1295..1699) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /note="TrAp protein; Gemini-AL2 superfamily" FT /db_xref="GOA:C1JYH2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C1JYH2" FT /protein_id="ACO53442.1" FT /translation="MRPSSPSTSHCTQVPIKVQHRLAKRKPRRRRVDLRCGCSLYISID FT CHNYGFTHRGVHHCSSGREWRVYLGNNQSPVFQDHQTRQQAIPTGTRHHYSSDTVQLQH FT AEGFGDTQMFSDLPDLDSLTTSDIEFLKGL" FT gene complement(1602..2687) FT /gene="AC1" FT CDS complement(1602..2687) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /note="Rep protein; Gemini-AL1 superfamily & Gemin-AL1-M FT superfamily" FT /db_xref="GOA:C1JYH3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C1JYH3" FT /protein_id="ACO53440.1" FT /translation="MRQPGQFRLNRKNFFLTYSQCPISKEEALQQILNTQTPVNKKFIR FT VCRELHEDGNPHLHALVQFEGKFQLTNPRFFDLQSPNSSAQYHCFITDAKSSSDVKAYI FT EKDGDILDWGTFQIDGRSARGGQQTANHAYARAINTGDKEQALDVIKELAPKDYVLQFH FT NLNSNLERIFMPPTQEYISPFNCSSFDQVPEEIEEWAADNVMSAAARPWRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHIDLSPKVYSNEAWYNIIDDVDPHYVKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKNIGLKNWALKNATFVTINQPL FT YSGSHQSPTQASQEETSQAEG" FT gene complement(2240..2536) FT /gene="AC4" FT CDS complement(2240..2536) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /note="Gemini-C4 superfamily" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C1JYH4" FT /protein_id="ACO53444.1" FT /translation="MRMETLISMLLCNSRGNSNSRIRDSSTYSHPIPPPNTTASSPMLS FT PVQTLRHTSRRMETYLTGAPSKLMEDLQEGDNRQQTMLTQEQLTQEIRNRLLM" XX SQ Sequence 2813 BP; 726 A; 574 C; 648 G; 865 T; 0 other; accgatggcc aaaaaaaaat ttatgccggc cccacctggc agcttttgtc tgccactaga 60 caatcccgtc caatcagatt tcagcctgaa agcttaaata aaattggcgc ccgctttaaa 120 tgcttggccg ctacgtttag tgcgttgtcc actatgtggg atccgctttt gaacccgttt 180 ccccagaccg tgcacgcctt tcgttgcatg ctttctgtaa agtatttaca ggccgttgaa 240 gacacatacg ctcctgatac tttaggtgct gatttaatta gggagttaat tgcagtaatt 300 agggcaaata attatgtcga agcgtgcagc agatatgatc atttcatcaa gcgggtcgag 360 ggtacgacgt cggctcaact tcgacagccc tatggctcgc cgtgctactg cccccattgt 420 ccgtgccact cgaaaacagc agtggtcgag ccgccccatg tatcgcaagc caaggttgta 480 ccgaatgtac agaagtcctg atgtgcctta tggctgtgag ggtccgtgta aggttcagtc 540 gtttgaaaaa aaacatgacg ttagtcatac tggcacgttg ttgtgtgtgt ctgatgttac 600 cagaggtagt gggattacgc atagagtagg gaagcgtttc tgcatcaagt caatttacat 660 catagggaag atatggatgg acgagaacat taagtccaag aatcatacta acacggtcat 720 gttctggtta gttagggatc gccgcccagt tacaacgcct tatggcttcg gtgaggcatt 780 taatatgtat gacaatgagc cctctactgc aactatcaag aacgatctgc gtgatcgttt 840 gcaggtgtta cacaggtttt ctgccacagt tactgggggt cagtatgcgt ctaaggagca 900 ggctatgatc aagcgtttct ggaggattaa caaccatgtg gtctacaacc atcaggagaa 960 ggcagcttat gaaaatcata ctgagaatgc attaatattg tatatggctt gtactcatgc 1020 tagcaatcct gtgtatgcta cgctgaaaat tagaatatat ttctatgatt ctgtaatgaa 1080 ttaataaata ttgaatttta ttatatgatt gaagtttaca tacaacgtat ggtgcaatgc 1140 attccatagt acatgattta ttgctctaat tacattgtta agacaaatta caccaagatt 1200 atcttaaata cttcataacc tgggtcaatc gtcatcgatt cattgttaag acaaattaca 1260 ccaagattat cttaaatact tcataacctg ggtcttaaag acccttaaga aactcaatgt 1320 ctgaggttgt aagcgagtcc agatctggca agtcagaaaa catttgtgta tccccaaagc 1380 cttccgcatg ttgtagttga actgtatctg aactgtaatg atgtcgtgtt cccgtaggaa 1440 tggcctgctg tcgtgtttga tgatcttgaa atacagggga ttggttattt cccaggtata 1500 cacgccattc tctgcctgag ctgcagtgat gtactcccct gtgcgtgaat ccatagttgt 1560 gacagtcaat ggagatgtat agtgaacagc cacaacgaag atcaaccctc cgcctgcgag 1620 gtttcctctt ggctagcctg tgttggactt tgatgggaac ctgagtacag tggctggttg 1680 atggtgacga aggtcgcatt ctttagggcc cagtttttta gacctatgtt tttctcctca 1740 tcaaggaact ctttatagga ggatgtcgga ccaggattgc agaggaagat tgttgggatc 1800 ccgcctttaa tttgaacggg cttcccgtat ttagtattgg actgccaatc cctttgggcc 1860 cccatgaatt ccttgaaatg tttcacataa tggggatcta catcgtctat tatgttatac 1920 caggcctcat tgctgtaaac cttaggacta aggtcaatat gaccgcatag gtaattatgt 1980 ggacctaatg atctagccca cattgtttta ccagtcctgc tgtcaccttc tatgactata 2040 cttattggtc tccagggccg cgcagcggca gacatgacat tgtctgcggc ccattcctca 2100 atttcttcag ggacctgatc aaaggatgaa caattaaaag gactaatgta ttcttgtgtt 2160 ggaggcatga atatgcgctc caagttagaa tttaaattat gaaattgtaa tacatagtcc 2220 ttaggagcta attccttgat tacatcaaga gcctgttcct tatctcctgt gttaattgct 2280 cttgcgtaag catggtttgc tgtctgttgt ccccctcttg cagatcttcc atcaatttgg 2340 aaggtgcccc agtcaagtat gtctccatcc ttctcgatgt atgccttaac gtctgaactg 2400 gacttagcat cggtgatgaa gcagtggtat tgggcggagg aattgggtga ctgtaggtcg 2460 aagaatctcg gattcgtgag ttggaatttc ccctcgaatt gcacaagagc atggagatga 2520 gggtttccat cctcatgtag ttctctgcaa accctaatga atttcttgtt tacaggggtt 2580 tgggtgttta ggatttgctg taatgcctct tctttagaga tagggcattg tgagtaggtg 2640 aggaagaagt tttttctatt taatctaaat tgcccaggct gacgcatgat gacgtttgtt 2700 tacacccgat gggagctctt ctaaaactct atgtcaatgg gtgtataggt gtgtattata 2760 tagtggggat ttttccggaa taaaaaattt ttttttggcc atcgtctaat att 2813 //