ID FJ602680; SV 1; linear; genomic RNA; STD; VRL; 2485 BP. XX AC FJ602680; XX DT 02-JUL-2010 (Rel. 105, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Rice stripe virus isolate MA-JN segment RNA3, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2485 RA Jonson G.-M., Choi H.-S., Kim J.-S., Choi I.-R., K-H K.; RT "Complete genome sequence of the RNAs 3 and 4 segments of Rice stripe virus RT isolates in Korea and their phylogenetic relationships with Japan and China RT isolates"; RL Plant Pathol. J. 25(2):142-150(2009). XX RN [2] RP 1-2485 RA Kim K.-H., Gilda Jonson M., Choi H.-S., Kim J.-S., Choi I.-R.; RT ; RL Submitted (01-JAN-2009) to the INSDC. RL Agricultural Biotechnology, Seoul National University, 599 Gwanak-ro, RL Daehak-dong, Gwanak-gu, Seoul 151-921, South Korea XX DR MD5; 2a824b38b9bb5fa9f7678deaf715e197. XX FH Key Location/Qualifiers FH FT source 1..2485 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA3" FT /isolate="MA-JN" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2007" FT /db_xref="taxon:3052763" FT CDS 66..701 FT /codon_start=1 FT /product="putative replication protein" FT /note="NS3" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:O10387" FT /protein_id="ACR57014.1" FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD FT IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY FT VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN FT RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL" FT CDS complement(1425..2393) FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:Q8JRD1" FT /db_xref="InterPro:IPR008864" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:Q8JRD1" FT /protein_id="ACR57015.1" FT /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG FT YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR FT YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV FT PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT FT TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR FT LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD" XX SQ Sequence 2485 BP; 766 A; 529 C; 429 G; 761 T; 0 other; acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacaattc cgacatcatc 60 taagtatgaa cgtgttcaca tcgtctgtag gttctgtgga atttgatcat cctctgcttt 120 tggagaatga tctgaccagt ttgagcataa actgtgatga tgtccattgt tcttcaagag 180 ccttatgtta tatatatgac attcattcgt ctaggcaccc ctccattgat gagcatcagt 240 ttctgaggct tcttcatggc cctgatgatg ctgtcactct aggctccttc ttgaaaactc 300 tgatctggat tctgtctcat gataagaatc tcccagaaga gtacagactt cctactataa 360 tgatgtcatc ttcatatgtg aagttcttca ctgaagtgaa gccaagaccc ccatcaacaa 420 attgctggac atgcagaatg tccaaagaca atttgccctt taccgttcct agtgtcaagg 480 gatttcctcc agatgcagag ctctatattg tgccaatatc tgaccatgat ggaaagcctg 540 tcaaatttga caataggaag actctatata gatcacctag taagaaaagg cataagtatg 600 tcatttcttc tgataaacca cctcttagtg cacgttatgt taagtacgtt gattctagtg 660 cactggagcc ctcaccaggc agctctccag ctgtgctgta gaaataaaaa aagaaaaaaa 720 agaaaaaaga aaataaaaca aacaatcaaa aaaacacaaa aaaatcccaa aaatggaaaa 780 cacaaaaaaa ccaaaaaact aaaaaaacta aaaaaacatc atgacctaaa aaactgcaca 840 ccactggttg tctagtgggc tctagttggt agagaaagct atgcttttgc ctaaagccat 900 gattggccaa tccttaaaat gtgctaagca cattatccga agatgtctcg gatgtttttt 960 tacctaacct aatttttttg tatttttata tagttttttg atttttttgt attttatata 1020 catatttttg attttttgat ttttttgttt tttaatatat ttttttacta attactacat 1080 taatatattt gattattcat atacttaaaa tatatagtat gtattataaa aatagagcaa 1140 tataataaag ctagtataac tacattacaa acacatatct aaatatttat atagacttat 1200 caaactaaag actctactag agagtgagca ataatagtgg caatacatca cacacaaagc 1260 ccaaaaccac acaaacaaaa taacttatgg aatataatta caaactaaaa tatacacata 1320 ttaaatatac atattaactt acacctaaag aaacaacaca ctgtttgaag acatgcatct 1380 tccagggaga tatgagatcc cccacaacta ctgacttgtt cagtctagtc atctgcacct 1440 tctgcctcat cctcgaagaa ctccttcacc aacccgctga cttcagatgc tgtctttgaa 1500 gtgttctcag caaggatctt catcagcttg ctctgttgag ccaagtacag ccttgtctga 1560 ttcccataag tgctgatcgt attgacagac ataccagcca gcgcatcgaa gattgtggtc 1620 ttcactttcc cattggtgat gaattcatct aagaccttct ttctgccatc ttccttcttc 1680 ttgtcagcca ggttctttga cttgcatgtg atgaccagga gaccagttgt gtacttcatc 1740 atgtctatgt cttttgtcag accacgctcc ttcttcttac cctctggcat ggtctttttg 1800 gttatctgga aggagtgaat gatgtgcaca acaaacaaaa tgtgacttag ggagtgagtt 1860 gtgcagtaag gagctgtttc actctccagt ttgatatatt gtggaacata gtcccacagt 1920 aagttgtcac atcctgttag tcccaggtca gaagagtcca cagccatttt aacaccagaa 1980 atttgtctca caacttcatg tgagacattt gggaatagct gagccagcct tccaagtgtg 2040 atggcattgg catttgttcc caccgaggac actatcccat acctcgacac caaggtcgaa 2100 gcctctgtgc ttccagctgc cactttcact ttcttggtga catctctcac aaagccagtg 2160 cctctcacat atctcatggt gatgcacata gtcatatcct tggccaatgt gtcaccacct 2220 ttgtccttca atatgccaat caaagttgca gcatcatagc ctgcatactc tatctgacca 2280 gcaaaggtca caacatcagc tttatgagca gtcaggtaag acaacgcatc tttggagatg 2340 tcattgatcg ccttctgcaa atcagctaga gtggctggct tgttggtgcc cattgtagca 2400 agaggtactg gaggaatggt tgcggcttag atgaaatttg gaatgtaaaa gcaaaatcga 2460 aaattttatt acccagactt tgtgt 2485 //