ID FJ015062; SV 1; circular; genomic DNA; STD; VRL; 2745 BP. XX AC FJ015062; XX DT 17-SEP-2008 (Rel. 97, Created) DT 17-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Alternanthera yellow vein virus isolate YN598 segment DNA-A, complete DE sequence. XX KW . XX OS Alternanthera yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2745 RA Ding M., Yang L., Zhang Z.; RT "Molecular characterization of begomovirus infecting Eclipta prostrata L."; RL Unpublished. XX RN [2] RP 1-2745 RA Ding M., Yang L., Zhang Z.; RT ; RL Submitted (13-AUG-2008) to the INSDC. RL Institute of Biotechnology and Genetics, Yunnan Academy of Agricultural RL Sciences, Xueyun Road 9, Kunming, Yunnan 650223, China XX DR MD5; fcdeb1c45d26a318f41a2a07479a26bc. XX FH Key Location/Qualifiers FH FT source 1..2745 FT /organism="Alternanthera yellow vein virus" FT /segment="DNA-A" FT /host="Eclipta prostrata L." FT /isolate="YN598" FT /mol_type="genomic DNA" FT /country="China" FT /collection_date="Mar-2008" FT /db_xref="taxon:337826" FT gene 154..501 FT /gene="AV2" FT CDS 154..501 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:B5TVE9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B5TVE9" FT /protein_id="ACH88348.1" FT /translation="MWDPLLNPFPKTVHGFRCMLAVKYLQAVEETYAPDTLGCDLIRDL FT ILVIRASNYVEACSRYDHFIKRIEGTSPSELRQSYSTPCYCPHCARHSKAAVVEPSHVP FT QAKVVQNVQKP" FT gene 314..1084 FT /gene="AV1" FT CDS 314..1084 FT /codon_start=1 FT /gene="AV1" FT /product="CP protein" FT /db_xref="GOA:B5TVF0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B5TVF0" FT /protein_id="ACH88349.1" FT /translation="MSKRAADMIISSSGSRVRRRLNFDSPIARRVTVPTVRATRKQQWS FT NRPMYRKPRLYRMYRSPDVPYGCEGPCKVQSFEKKHDVSHTGTLLCVSDVTRGNGITHR FT VGKRFCIKSIYILGKIWMDENIKSKNHTNTVMFWLVRDRRPVTTPYGFGEAFNMYDNEP FT STATIKNDLRDRLQVLHRFSATVTGGQYASKEQAMVKRFWRVNNHVVYNHQEKAAYENH FT TENALVLYMACTHASNPVYATLKIRIYFYDSVMN" FT gene complement(1081..1485) FT /gene="AC3" FT CDS complement(1081..1485) FT /codon_start=1 FT /gene="AC3" FT /product="REn protein" FT /db_xref="GOA:B5TVF1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B5TVF1" FT /protein_id="ACH88350.1" FT /translation="MDSRTGEYITAVQAENGVYTWEITNPLYFKIIKHDSRPFLREHDI FT ITVQIQFNYNLRKALGIHKCFLTCQIWTRLQPQTLSFLRVFKTQIMKYLDNLGVICLNN FT VIRAINHVLWNAFHHTLYVNFNHIIKFNIY" FT gene complement(1226..1630) FT /gene="AC2" FT CDS complement(1226..1630) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP protein" FT /db_xref="GOA:B5TVF2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B5TVF2" FT /protein_id="ACH88351.1" FT /translation="MRPSSPSTSHCTQVPIKVQHRLAKRKPRRRRVDLRCGCSLYISLD FT CHNYGFTHRGIHHCSSGREWRVYLGNNQSPVFQDHQARQQTIPTRARHHYSSDTVQLQP FT AEGFGDTQMFSDLPDLDSLTTSDIEFLKGL" FT gene complement(1533..2618) FT /gene="AC1" FT CDS complement(1533..2618) FT /codon_start=1 FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:B5TVF3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B5TVF3" FT /protein_id="ACH88352.1" FT /translation="MRQPGQFRLNRKNFFLTYSQCPISKEEALQQLINTQTPVNKKFIR FT VCRELHEDGNPHLHALVQFEGKFCLTNPRFFDLQSPNSSSQYHCFITDAKSSSDVKAYI FT EKDGDILDWGTFQIDGRSARGGQQTANDAYARAINTGIKEQALDVIRELAPKDYVLQFH FT NLNANLERIFMPPTQEYISPFNCSSFDQVPEEIEEWAADNVMSAAARPWRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHIDLSPRVYSNEAWYNIIDDVDPHYVKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKNIGLKNWALKNATFVTINQPL FT YSGSHQSPTQASQEETSQTEG" FT gene complement(2171..2461) FT /gene="AC4" FT CDS complement(2171..2461) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B5TVF4" FT /protein_id="ACH88353.1" FT /translation="METLISMLLCNSKASSASRIQDSSTYSHPTPPPNTTASSPMQSPV FT QTLRHTSRRTETYLTGVPSRLTAGLQEGVNRQQTMLTQEQLTQELRNRLLM" XX SQ Sequence 2745 BP; 719 A; 551 C; 629 G; 846 T; 0 other; accgatggcc aaaaaaaaat ttatgtcggc cccacctggc agcttttgtc tgccactaga 60 caatcccgtc caatcagaat tcagcctgaa agcttaaata aaattggcgc ccactttaaa 120 tgcttggccc ctacgtttag tgcgtatacc actatgtggg atccgctttt gaatccgttt 180 cccaagacag tgcacggctt tcgttgcatg cttgctgtaa agtatttaca ggccgttgaa 240 gagacatacg ctcctgatac tttaggttgt gatttaatta gagatttaat tctggtaatt 300 agggcttcta attatgtcga agcgtgcagc cgatatgatc atttcatcaa gcggatcgag 360 ggtacgtcgc cgtctgaact tcgacagtcc tatagcacgc cgtgttactg tccccactgt 420 gcgcgccact cgaaagcagc agtggtcgaa ccgtcccatg taccgcaagc caaggttgta 480 cagaatgtac agaagccctg atgtgccgta tggctgtgag ggtccttgta aagtccagtc 540 atttgaaaag aaacatgatg ttagtcatac agggacgttg ttgtgtgtgt ctgatgttac 600 cagagggaat gggattactc atagagtagg gaagcgtttt tgtattaagt caatttatat 660 cctggggaag atatggatgg atgaaaacat taagtccaag aatcatacta acacggttat 720 gttctggtta gttagggatc gtcgcccagt tacaacgcct tatggttttg gtgaggcgtt 780 taacatgtat gacaatgaac cgtctactgc aactatcaag aacgatctgc gtgatcgttt 840 gcaggttcta cacaggtttt ctgccactgt tacaggtggt cagtatgcat ctaaggagca 900 ggcaatggtc aagcgtttct ggagggttaa caatcatgtg gtctataacc atcaggagaa 960 ggcagcttat gaaaatcata ctgagaatgc cttagttttg tatatggctt gtactcatgc 1020 tagcaatcct gtgtatgcta cgctgaaaat tagaatatat ttctatgact ctgtaatgaa 1080 ttaataaata ttgaatttta ttatatgatt gaagtttaca tacaaagtat ggtgaaatgc 1140 attccataat acatgattaa ttgctctaat tacattgtta agacaaatta caccaagatt 1200 atctaaatac ttcataatct gggtcttaaa gacccttaag aaactcaatg tctgaggttg 1260 taagcgagtc cagatctggc aagtcagaaa acatttgtgt atccccaaag ccttccgcag 1320 gttgtagttg aactgtatct gaactgtaat gatgtcgtgc tctcgtagga atggtctgct 1380 gtcgtgcttg atgatcttga aatacagggg attggttatt tcccaggtat acacgccatt 1440 ctctgcctga actgcagtga tgtattcccc tgtgcgtgaa tccatagttg tgacagtcaa 1500 gtgagatgta tagtgaacag ccgcaacgca gatcaaccct ccgtctgcga ggtttcctct 1560 tggctagcct gtgttggact ttgatgggaa cctgagtaca gtggctggtt gatggtgacg 1620 aaggtcgcat tctttaaggc ccagttttta agacctatgt ttttctcctc atcaaggaac 1680 tctttatagg aggatgttgg accaggattg cagaggaaga ttgttggaat cccgccttta 1740 atttgaacgg gcttcccgta ttttgtattg gactgccaat ccctttgggc ccccatgaat 1800 tccttgaaat gtttcacata gtgaggatca acatcgtcta ttatgttata ccaggcctca 1860 ttgctgtaga ccctaggact aaggtcaata tgaccgcata ggtaattatg tggacctaat 1920 gatctagccc acattgtttt accagtcctg ctatcacctt ctatgactat acttattggt 1980 ctccaaggcc gcgcagcggc agacattaca ttgtctgcag cccattcctc aatctcttca 2040 gggacctgat caaacgatga acaattaaat ggactaatgt attcttgagt tggaggcatg 2100 aatatgcgct ccagattagc atttaaatta tgaaattgta atacatagtc cttaggagct 2160 aattccctga ttacatcaag agcctgttcc ttaattcctg tgttaattgc tcttgcgtaa 2220 gcatcgtttg ctgtctgttg accccctctt gcagacctgc cgtcaatctg gaaggtaccc 2280 cagtcaagta tgtctccgtc cttctcgatg tatgccttaa cgtctgaact ggactttgca 2340 tcggtgatga agcagtggta ttgggaggag gagttgggtg actgtaggtc gaagaatctt 2400 ggattcgtga ggcagaactt gccttcgaat tgcacaagag catggagatg agggtttcca 2460 tcctcatgta gttctctaca aaccctaatg aatttcttgt tcactggggt ttgggtgtta 2520 attaattgct gtagtgcctc ttctttagag atagggcatt gtgagtaagt gaggaagaag 2580 ttttttctat ttaatctaaa ttgcccaggc tgacgcatga tgacgtatct gttcacccga 2640 tgggtgctcc ttcaaaactc taagtcaatg ggtgaatggg tgcataatat atagtgttga 2700 ttattccgga ataaaaaatt tttttttggc catcgctcta atatt 2745 //