ID EU867513; SV 1; circular; genomic DNA; STD; VRL; 2746 BP. XX AC EU867513; XX DT 13-AUG-2008 (Rel. 96, Created) DT 13-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Ageratum enation virus - Lucknow segment A, complete sequence. XX KW . XX OS Ageratum enation virus - Lucknow OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2746 RA Srivastava A., Raj S.K., Snehi S.K., Khan M.S., Chandra P., Pandey R.M.; RT "First molecular identification of Ageratum enation virus associated with RT yellow vein net disease in grain amaranth (Amaranthus cruentus L.) in RT India"; RL Unpublished. XX RN [2] RP 1-2746 RA Raj S.K., Snehi S.K., Khan M.S.; RT ; RL Submitted (02-JUL-2008) to the INSDC. RL Plant Molecular Virology, National Botanical Research Institute, Lucknow, RL U. P. 226 001, India XX DR MD5; 538b443e6b5fef1649c04b4946679256. DR EuropePMC; PMC4353908; 25674770. DR EuropePMC; PMC5796946; 29430354. XX FH Key Location/Qualifiers FH FT source 1..2746 FT /organism="Ageratum enation virus - Lucknow" FT /segment="A" FT /host="Amaranthus cruentus L. (Grain Amaranth)" FT /strain="Lucknow" FT /isolate="Amaranths" FT /mol_type="genomic DNA" FT /country="India" FT /db_xref="taxon:500471" FT CDS 133..480 FT /codon_start=1 FT /product="AV2" FT /note="precoat protein" FT /db_xref="GOA:B5APR0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B5APR0" FT /protein_id="ACG60165.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL FT ISVIRARNYVEATSRYNHFHARFEGTSPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KTQDVQDVQKS" FT CDS 293..1063 FT /codon_start=1 FT /product="AV1" FT /note="coat protein; involved in encapsidation and virus FT transmission by insect" FT /db_xref="GOA:B5APR1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B5APR1" FT /protein_id="ACG60166.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKARAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKGQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1060..1464) FT /codon_start=1 FT /product="AC3" FT /note="REn protein; increases viral replication" FT /db_xref="GOA:B5APR2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B5APR2" FT /protein_id="ACG60167.1" FT /translation="MDSRTGELITAAQAENGVYTWENQNPLYFKITEHQNRPFLMKEDS FT ITVQIQFNYNLRKALEIHKCFLAYRIWMTSQPPTGQFLRVFKTQVLKYLNNLGIISINN FT VIRAVDHVLWDVLEHIVYVDQSYSIKFNIY" FT CDS complement(1205..1609) FT /codon_start=1 FT /product="AC2" FT /note="TrAP; transcriptional activator for virus sense FT genes" FT /db_xref="GOA:B5APR3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B5APR3" FT /protein_id="ACG60168.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALA FT CHNHGFTHRGTHHCSSSREWRVYLGESKSPVFQDNRTPEPAISHERGQHHRPNTVQLQP FT EESVGDTQVFSSLPNLDDFTASDWAILKGL" FT CDS complement(1512..2597) FT /codon_start=1 FT /product="AC1" FT /note="replication associated protein; Rep; viral DNA FT replication" FT /db_xref="GOA:B5APR4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B5APR4" FT /protein_id="ACG60169.1" FT /translation="MAAPNRLKINAKNYFLTYPKCSLTKEEALFLLLNLQPPTNKKYIK FT IFRELHKDGSPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQRAKSSTDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAAMAIIREKLPEKFIFQYH FT NLNSNLDRIFSPPLEVYISPFLSSSFDQVPEELEEWVSENVMVAAARPLRPQSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALRNWALKNAIFVTLEGPL FT YSGSNQSAAQASQEGDEASTC" FT CDS complement(2183..2440) FT /codon_start=1 FT /product="AC4" FT /note="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B5APR5" FT /protein_id="ACG60170.1" FT /translation="MGALISMCSSSSKGNISARINDSSTWYPQTGQHISIRTFRELNPA FT PTSSPTSTRTETPSNGENSRSMEDLHEEVNRQLMMLLQKP" XX SQ Sequence 2746 BP; 733 A; 542 C; 622 G; 849 T; 0 other; accggatggc cgcgaatttt ttgtggcccc cgcaacgcat ttacatgtgg accaatgaaa 60 ttggctcctc gtggcttaat tgttttgtgg tcccttattt aaacttgctc accaagtagt 120 gcactccgca ctatgtggga tccattagta aacgagtttc ccgaaaccgt tcacggtttt 180 agatgtatgt tagcagttaa atatctgcag ttagtagaga agacttattc tcctgataca 240 ttagggcacg atttaattag ggatttaatt tcagtaatta gggctagaaa ttatgtcgaa 300 gcgaccagca gatataatca tttccacgcc cgcttcgaag gtacgtcgcc gtctcaactt 360 cgacagccca tatgtgagcc gtgctgctgc ccccattgtc cgcgtcacca aagcaagagc 420 atgggcgaac aggcccatga acagaaaacc caggatgtac aggatgtaca gaagtcctga 480 tgtccctaga ggatgtgaag gcccatgtaa gggccagtcg tttgagtcca gacatgacat 540 tcagcatata ggtaaagtca tgtgtgtcag tgatgttacg cgtggaactg ggctgactca 600 ccgagtgggt aaaaggtttt gtgttaaatc cgtttatgtc ttgggtaaga tatggatgga 660 cgaaaatatt aagaccaaga accacactaa cagtgttatg ttttttttag ttagggatcg 720 taggcctgtg gataaacctc aagattttgg tgaggttttt aacatgtttg ataatgagcc 780 cagtacggct actgtgaaga atgttcatcg tgataggtat caagtgcttc ggaaatggca 840 tgcaactgtt acgggtggac aatatgcgtc aaaggaacaa gctcttgtga agaagtttgt 900 tagggttaat aattatgttg tgtataacca gcaagaagct ggcaagtatg aaaatcattc 960 tgagaatgcg ttaatgttgt atatggcatg tacgcatgcc tctaacccag tgtatgctac 1020 tttgaagata cggatctatt tctatgattc tgtaacaaat taataaatat tgaattttat 1080 tgaataagat tggtctacat atacaatgtg ttctaataca tcccataata catgatcaac 1140 tgcacgaatt acattattaa tactgataat tcctaaatta tttaaatatt taagcacttg 1200 ggtcttaaag acccttaaga attgcccagt cggaggctgt gaagtcatcc agattcggta 1260 ggctagaaaa cacttgtgta tctccaacgc tttcctcagg ttgtaattga actgtatttg 1320 gacggtgatg ctgtcctctt tcatgagaaa tggccggttc tggtgttctg ttatcttgaa 1380 atacagggga ttttgattct cccaggtata cacgccattc tctgcttgag ctgcagtgat 1440 gagttcccct gtgcgtgaat ccatggttgt ggcaggctaa tgctatgaag tatgaacacc 1500 cacaagggag atcaacacgt cgacgcctcg tccccttctt ggctagcctg tgctgcactt 1560 tgattggaac ctgagtagag tgggccttcg agggtgacga agatcgcatt ctttaaagcc 1620 caatttctga gtgcattatt cttctcttca tccaagaact ctttataact tgaattaggt 1680 cctggattgc agaggaagat agtgggaatt ccgcctttaa tttgaactgg ctttccgtat 1740 ttggtatttg attgccagtc cctttgggcc cccatgaatt ctttaaagtg ctttaggtag 1800 tggggatcta cgtcatcgat gacgttatac cacgcatcat tgctgtaaac tttggggctt 1860 agatctaaat gaccgcatag gtaattatga ggccctaatg acctagccca catcgtttta 1920 cccgtacgac tgtctccctc aattactata ctttgaggcc tcagaggccg cgcagcggca 1980 accatgacat tttctgagac ccattcttca agttcttcag gaacttgatc aaaagaagaa 2040 gataaaaaag gcgaaatata aacctccaac ggaggactaa aaatcctatc taaattagaa 2100 tttaaattat gatattgaaa aataaatttt tctgggagtt tctcccttat tatagccatt 2160 gcagcttctt tagagcctgc atttagggct tctgcagcag catcattagc tgtctgttga 2220 cctcctcgtg cagatcttcc atcgatctgg aattctcccc attcgagggt gtctccgtcc 2280 ttgtcgatgt aggacttgac gtcggtgctg gatttagctc tctgaatgtt cggatggaaa 2340 tgtgctgacc tgtttgggga taccaggtcg aagaatcgtt gattcttgca ctgatatttc 2400 ccttcgaact ggatgagcac atggagatga gggctcccat ctttgtgtag ttctctgaag 2460 atcttgatgt attttttgtt tgttgggggt tggagattta ataataggaa aagtgcctct 2520 tctttagtaa gggagcactt gggataagtg agaaaataat ttttggcatt tatttttaac 2580 cgattcgggg ctgccatgtt gacttagtca atcggtgtct ctcaaccttc tctatgtatc 2640 ggtgtatcgg agtcctatat atatggagac tccaatggca taattgtaat aacaaaactt 2700 taatttgaaa tccttaaggc tccaaagcgg ccatccgtct aatatt 2746 //