ID EU856366; SV 2; circular; genomic DNA; STD; VRL; 2828 BP. XX AC EU856366; XX DT 18-JUN-2009 (Rel. 101, Created) DT 18-JUN-2009 (Rel. 101, Last updated, Version 1) XX DE Sweet potato leaf curl virus-Spain isolate ES:CI:BG13:02, complete genome. XX KW . XX OS Sweet potato leaf curl virus-Spain OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Available-Online prior to print RP 1-2828 RX DOI; 10.1099/vir.0.012542-0. RX PUBMED; 19515824. RA Lozano G., Trenado H.P., Valverde R.A., Navas-Castillo J.; RT "Novel begomovirus species of recombinant nature in sweet potato (Ipomoea RT batatas) and Ipomoea indica: taxonomic and phylogenetic implications"; RL J. Gen. Virol. 90(Pt 10):2550-2562(2009). XX RN [2] RP 1-2828 RA Lozano G., Pinar-Trenado H., Navas-Castillo J.; RT ; RL Submitted (29-JUN-2008) to the INSDC. RL Fruticultura Subtropical y Fitopatologia, Estacion Experimental La Mayora, RL Algarrobo-Costa, Malaga 29760, Spain XX RN [3] RC Sequence update by submitter RP 1-2828 RA Trenado H.P., Lozano G., Navas-Castillo J.; RT ; RL Submitted (16-JUN-2009) to the INSDC. RL Virology, CSIC, Estacion Experimental La Mayora, Algarrobo-Costa, Malaga RL 29760, Spain XX DR MD5; a6a0e54e43aeaac7204ccbb292e91787. XX CC On Jun 17, 2009 this sequence version replaced gi:223047840. XX FH Key Location/Qualifiers FH FT source 1..2828 FT /organism="Sweet potato leaf curl virus-Spain" FT /host="Ipomoea batatas" FT /isolate="ES:CI:BG13:02" FT /mol_type="genomic DNA" FT /country="Spain" FT /db_xref="taxon:652719" FT gene 99..470 FT /gene="V2" FT CDS 99..470 FT /codon_start=1 FT /gene="V2" FT /product="V2" FT /db_xref="GOA:C5H6W8" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:C5H6W8" FT /protein_id="ACM79929.1" FT /translation="MLFQSWRPSMAELWDPLQNPLPNTLYGFRCMLSVKYLQGILKKYE FT PGTLGFELCSELIRIFRVRQYDRTNSRFAEISSLWGETGKTEAELRDSYRALHWECCPN FT CCPKLCPGFKRRPDEEKEG" FT gene 295..1059 FT /gene="V1" FT CDS 295..1059 FT /codon_start=1 FT /gene="V1" FT /product="capsid protein" FT /db_xref="GOA:C5H6W9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:C5H6W9" FT /protein_id="ACM79930.1" FT /translation="MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK FT RVCVKSMGIDGKVWMDDNVAKIDHTNIITYWLIRDRRPNKDPLNFVQVFTMYDNEPTTA FT KIRMDLRDRMQVLKEFSVTVSGGPYSHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLE FT NALMLYSASSHDINPVYQTLRCRAYFYDSHNN" FT gene complement(1075..1509) FT /gene="C3" FT CDS complement(1075..1509) FT /codon_start=1 FT /gene="C3" FT /product="REn" FT /note="replication enhancer protein" FT /db_xref="GOA:C5H6X0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C5H6X0" FT /protein_id="ACM79931.1" FT /translation="MDSRTGESLSRAQTMRALEFDTNPMSVGRTAPFYLRVIYVHQSAQ FT GRTIIKFQMRVNYRERIALGFHKIFLQFRIVTTRLTGAFHSWTGILERLKWRICNELAN FT IGFFSLINLVYVIRHLPESVRWIEEVDTIDCNDDVKALLY" FT gene complement(1226..1672) FT /gene="C2" FT CDS complement(1226..1672) FT /codon_start=1 FT /gene="C2" FT /product="TrAP" FT /note="transcriptional activator protein" FT /db_xref="GOA:C5H6V7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C5H6V7" FT /protein_id="ACM79932.1" FT /translation="MSNLPSGIKRKCPIQEPLHAEAKKAKRKAPETRTRIVWKGCGCSA FT FITQTCKYQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTILPESNLRPPECTGENNH FT QIPDEGQLQGENSSGIPQNIPAIQDSDDPANWCFSQLDWYFGTP" FT gene complement(1581..2674) FT /gene="C1" FT misc_feature complement(1581..2674) FT /gene="C1" FT /note="nonfunctional Rep due to mutation; FT replication-associated protein" FT gene complement(2260..2517) FT /gene="C4" FT CDS complement(2260..2517) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C5H6V9" FT /protein_id="ACM79933.1" FT /translation="MGNLTSMCLCSSKVNSSAQIADSSTLCHPQGRLTFTPTSRELNHR FT PMSSPTLIRTGIPSPGVNSRSTADLLEEVSRLLMTQPQRP" XX SQ Sequence 2828 BP; 735 A; 603 C; 673 G; 817 T; 0 other; accggtgccc gccgcgccct tttaaagtgg gccccacatt ggggaccacg cgtcttttct 60 gttcttactt taatgatgac attgctttat aaggaccaat gctgttccag tcttggcgcc 120 caagtatggc tgagttgtgg gacccacttc agaacccgct cccaaatact ttatacggtt 180 ttaggtgtat gctttctgta aaatacctgc aaggtatttt gaagaaatac gagccaggaa 240 ccttagggtt tgagctctgt tcggaattaa tccgtatatt cagggtcagg cagtatgaca 300 ggacgaattc ccgtttcgcg gagatttcat ccctatgggg ggagaccggt aagacggagg 360 ctgaacttcg agacagctat cgtgccttac actgggaatg ctgtcccaat tgctgcccga 420 agctatgtcc cggtttcaag aggcgtccgg atgaagagaa agaggggtga ccgcatcccg 480 aagggttgtg tgggtccctg taaggtccag gactatgagt tcaagatgga cgttccccac 540 acgggaacgt ttgtctgtgt ctcggatttt acaaggggga ctgggcttac ccatcgcctg 600 ggtaagcgtg tttgtgttaa gtcaatgggt atagatggga aggtctggat ggatgacaat 660 gtggccaaga tagatcacac caatatcatc acgtattggt tgatccgtga cagaaggccc 720 aataaggatc cgcttaattt tgtacaggtt ttcaccatgt acgacaacga gccaactacc 780 gctaagatcc gaatggatct gagggataga atgcaggtct tgaaggagtt ctctgttaca 840 gtttcaggag gcccctacag ccacaaggaa caggctttgg ttagaaagtt ttttaagggt 900 ttgtataatc atgtaactta caatcacaag gaagaagcta aatacgagaa tcacttagag 960 aatgccctta tgctgtatag tgctagtagt catgatatta atcctgtgta tcagaccctg 1020 cgttgcaggg cttatttcta tgattcacac aataattaat aaaattttat tttattaata 1080 cagtaatgct tttacatcat cattacaatc tatagtatct acttcttcta tccatctaac 1140 tgattcaggc agatgcctga ttacataaac taaattaata agagaaaaaa aacctatatt 1200 agctaattca ttacagatac gccatttaag gcgttccaaa ataccagtcc aactgtgaaa 1260 agcaccagtt agccgggtcg tcactatcct gaattgcagg aatattttgt ggaatcccag 1320 agctattctc tccctgtagt tgaccctcat ctggaatttg atgattgttc tcccctgtgc 1380 actctggtgg acgtagatta ctctcaggta gaatggtgca gtccgaccca cagacatggg 1440 gttggtgtcg aattctagtg ctctcatagt ctgagcacga cttagtgatt cccctgtgcg 1500 tgaatccatg ctggtacttg caggtttggg tgatgaaggc tgagcagccg cagcccttcc 1560 acactatcct tgtccttgtt tcaggagctt tcctcttggc cttcttcgcc tctgcgtgca 1620 gtggctcctg aatgggacac ttcctcttga ttccagaagg gagattggac atcgcagaat 1680 atagcgtttg ctgttgccca attcttgagt gctccttgct ctggtttgtc caaccagagt 1740 ttaaatgaag agccctctcc tggattgcag aggaagatac tgggaattcc gcctttaatt 1800 tgaactggct tcccgtactt acagttggat tgccagtcct tctgggcccc catgaattcc 1860 ttaaagtgct ttaggtattg ggggttgacg tcatcaatga cgttatacca agcactgttg 1920 ctataaactt tagggcttag atctaaatgc ccacacaaat aattgtgagg gcccaaagat 1980 ctggcccata ctgttttgcc tattctgctt gggccttcaa taacaatgga tatgggtcta 2040 tccggccgcg cagcggaatc catgacattt tcagcggccc agtcgctgat aatgtcagga 2100 acggcattga aagaagaaga agaaaaggtg aagaatatac agaaggtgga ggagaaaaaa 2160 tcctatctaa attagaaact aaattatgaa actgaaataa atatttttca gggagtttct 2220 ccctaattat ttgcaacgca gcttctttag aacctgcgtt tagggcctct gcggctgcgt 2280 cattagcagt ctgctgacct cctctagcag atctgccgtc gacctggaat tcaccccagg 2340 tgatggtatc cccgtcctta tcaacgtagg acttgacatc ggacgatgat ttagctccct 2400 ggatgttggg gtgaaagtga gccgaccttg tgggtgacac aaggtcgaag aatctgctat 2460 ttgtgcagac gaatttacct tcgaactgca caagcacatg gaggtgaggt tccccatcct 2520 cgtgcagttc tttggctatg tgtatgtatt ttttatttgt gggggtttgg atgttaagta 2580 gttgggagag gcagtcctct ttagagagcg aacatcgtgg ataagtaata aaatagtttt 2640 ttgaagaaat tctaaaacgt ttgggcggag ccatttggtg acactcagac tttcaaatga 2700 attggtgact ggtgacaatt tatactatgt caccaaatgg catttctgta atttagaaga 2760 tccttttagc tttaattcaa attccgacaa ctctggctcc accaaaaggc gggcaccgta 2820 ttaatatt 2828 //