ID   EU852921; SV 1; linear; genomic RNA; STD; VRL; 1817 BP.
XX
AC   EU852921;
XX
DT   01-JUL-2009 (Rel. 101, Created)
DT   28-JAN-2011 (Rel. 107, Last updated, Version 2)
XX
DE   Pelargonium line pattern virus isolate SPA8 clone 1 putative movement
DE   protein (p7), putative movement protein (p9), and coat protein (CP) genes,
DE   complete cds.
XX
KW   .
XX
OS   Pelargonium line pattern virus
OC   Viruses; Riboviria; Tombusviridae; Procedovirinae; Pelarspovirus.
XX
RN   [1]
RP   1-1817
RX   DOI; 10.1016/j.virusres.2010.10.022.
RX   PUBMED; 20979982.
RA   Castano A., Ruiz L., Elena S.F., Hernandez C.;
RT   "Population differentiation and selective constraints in Pelargonium line
RT   pattern virus";
RL   Virus Res. 155(1):274-282(2011).
XX
RN   [2]
RP   1-1817
RA   Castano A., Ruiz L., Hernandez C.;
RT   "Sequence variability of distinct isolates of Pelargonium line pattern
RT   virus";
RL   Unpublished.
XX
RN   [3]
RP   1-1817
RA   Castano A., Ruiz L., Hernandez C.;
RT   ;
RL   Submitted (26-JUN-2008) to the INSDC.
RL   Instituto de Biologia Molecular y Celular de Plantas, Ingeniero Fausto Elio
RL   s/n, Valencia, Valencia 46022, Spain
XX
DR   MD5; abb8ab0216a9af302cd4295f0270d835.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1817
FT                   /organism="Pelargonium line pattern virus"
FT                   /host="Pelargonium zonale"
FT                   /lab_host="Chenopodium quinoa"
FT                   /isolate="SPA8"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain"
FT                   /clone="1"
FT                   /db_xref="taxon:167019"
FT   gene            208..399
FT                   /gene="p7"
FT   CDS             208..399
FT                   /codon_start=1
FT                   /gene="p7"
FT                   /product="putative movement protein"
FT                   /db_xref="GOA:C6F3J9"
FT                   /db_xref="InterPro:IPR007982"
FT                   /db_xref="UniProtKB/TrEMBL:C6F3J9"
FT                   /protein_id="ACJ38463.1"
FT                   /translation="MDIQPKDTNLSVKEAGKSAKRGSTKNKLDIAHSGVSKGTSRDLVG
FT                   ANFVTVADKVEFVVHLHF"
FT   gene            305..571
FT                   /gene="p9"
FT   CDS             305..571
FT                   /codon_start=1
FT                   /transl_except=(pos:305..307,aa:Met)
FT                   /gene="p9"
FT                   /product="putative movement protein"
FT                   /note="non-canonical start codon"
FT                   /db_xref="GOA:C6F3K0"
FT                   /db_xref="UniProtKB/TrEMBL:C6F3K0"
FT                   /protein_id="ACJ38464.1"
FT                   /translation="MEYPRVHLAILSVLILSQLLIKWNLWYISISSFLPQPHLLHPNLL
FT                   VCIVLCIFFSSVLSQGQSYSYSYISTSTSDKFISVAVGNGGQG"
FT   gene            555..1571
FT                   /gene="CP"
FT   CDS             555..1571
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:C6F3M2"
FT                   /db_xref="InterPro:IPR000937"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C6F3M2"
FT                   /protein_id="ACJ38465.1"
FT                   /translation="MAAKDNPAVLAAVARREQWAIKLQSKGWGSLSKAQKATARSYGIG
FT                   NPPTVVVPRTTRLVAGNPMNARRARGEPGNAKMGTTITKQEYMGELHSSSRIETYLLDP
FT                   KNVRSFPQLSGLAIGYNKYKITDFKVRYSPKCSDSECGLTIAYSSDSSDPPPKNKFNLF
FT                   SMNHKYETAAHKPLLVTLPVSKETRFLRDKCTDDSKLVDSGAVHVLVDGNHEGRLGELF
FT                   FELTIVFSEPTFCNHHSQVIKGLKESEGPEYVKLEPDKETVKLVFQAAGAYLISIVASK
FT                   LERIGQLGASEGDKLVVEGADKSACLCRIEAEQPGSAVVLVYASREAITLRAYINKL"
XX
SQ   Sequence 1817 BP; 477 A; 445 C; 476 G; 419 T; 0 other;
     gaaaatggcc ttctacgggg actactattg gaagtgggtc aaccagcata acggcaagta        60
     tgaaccggtg accgaggaag ctcgacactc attccacttg gcgtttggga ttagccctga       120
     ccaacagttg gccttagagg ctatatacgc tcgcaagtcg ctactttggg agtcctcccc       180
     ctttacattt gaagttggcg ctatcgaatg gatattcaac caaaagatac caatctgagt       240
     gtaaaggaag cagggaaatc agcaaagcgc ggaagtacaa agaacaagct agacatagcg       300
     cacagtggag tatccaaggg tacatctcgc gatcttgtcg gtgctaattt tgtcacagtt       360
     gctgataaag tggaatttgt ggtacatctc catttctagt ttcttaccac agccacactt       420
     gttgcaccct aatctgcttg tctgcattgt gttgtgcatc ttcttcagtt cagttcttag       480
     ccagggacag agttatagtt atagttacat ttcaactagc accagcgata aattcatctc       540
     agtagctgta ggaaatggcg gccaaggata atccggcagt cctcgcagcc gtggcgaggc       600
     gggaacaatg ggcgatcaag ctccaatcca agggttgggg ctctctgtca aaggcccaga       660
     aagccaccgc tcgctcgtac gggataggga atcctccgac agtcgtggtg cctcgcacta       720
     cccggctggt ggctggaaac cccatgaacg cgcggcgggc gcggggagag cctggtaatg       780
     ccaaaatggg caccaccata accaagcaag aatacatggg cgagcttcat tcttcttcaa       840
     ggattgaaac ttacttgctc gaccccaaga atgtgaggag cttccctcag ttaagcgggc       900
     ttgcaatcgg ctacaacaag tacaagatta ctgacttcaa ggtgcggtac agccctaaat       960
     gtagcgacag tgagtgtggg ttaaccatag cttactccag cgactcttca gacccaccgc      1020
     cgaagaacaa attcaacttg tttagcatga accacaagta cgaaacagcc gcgcacaagc      1080
     cactcctagt aacacttccc gtgtccaaag agaccagatt cttgcgggat aagtgtactg      1140
     atgattccaa gctcgtagac agtggggcgg tgcatgtcct ggtggacggg aatcacgagg      1200
     gcaggctcgg agagcttttc ttcgagttga ccatcgtgtt ttctgagcca accttttgca      1260
     atcaccactc ccaagttatc aagggactca aagagagtga aggacccgaa tatgtcaaac      1320
     ttgagcctga caaggagacc gtgaaactgg ttttccaggc agcgggggcg tacttaattt      1380
     ctatagtagc ctccaagcta gagcgaatcg ggcagcttgg tgcttctgaa ggtgacaagc      1440
     tggtagttga aggtgctgat aagagtgcct gcctctgtag aatagaggcg gagcaacccg      1500
     gtagtgctgt agtattagtt tatgccagca gggaggccat taccctgcga gcttacatca      1560
     acaagctatg aggaaagcca ctgcggtggg gtcagtctcc tggtgcgcca acacccagaa      1620
     ggggagacaa cttcagtggt tgataacccg atgcttagtg taagcctaga aaaacccaaa      1680
     aacagagtgt tactgctttc agcgtgcgag ctttatttgc tcacttcctc cgtcgataaa      1740
     atcccgattt ttcgggtggg cttcggcgga catccttaat gaagaacggg ggggtaaccc      1800
     acccccctga tctgccc                                                     1817
//