ID   EU798996; SV 1; circular; genomic DNA; STD; VRL; 2743 BP.
XX
AC   EU798996;
XX
DT   18-AUG-2008 (Rel. 96, Created)
DT   18-AUG-2008 (Rel. 96, Last updated, Version 1)
XX
DE   Jatropha leaf curl virus segment DNA A, complete sequence.
XX
KW   .
XX
OS   Jatropha leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2743
RA   Pal A., Mukherjee S.;
RT   ;
RL   Submitted (06-JUN-2008) to the INSDC.
RL   Plant Molecular Biology, International Center For Genetic Engineering And
RL   Biotechnology, Aruna Asaf Ali Marg, New Delhi, Delhi 110067, India
XX
DR   MD5; 194a16abf30d16b2032ef6ec27523e38.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2743
FT                   /organism="Jatropha leaf curl virus"
FT                   /segment="DNA A"
FT                   /host="Jatropha"
FT                   /isolate="New Delhi"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /db_xref="taxon:543876"
FT   CDS             143..496
FT                   /codon_start=1
FT                   /product="precoat protein"
FT                   /note="AV2"
FT                   /db_xref="GOA:B5A466"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="UniProtKB/TrEMBL:B5A466"
FT                   /protein_id="ACG69440.1"
FT                   /translation="MWDPLTNEFPETLHGFRCMLAVKYLQALLSSYAPDTVGYEYLRDL
FT                   ISVLRCRDYGKASIRYGRIVAAKNNTPETELRESLPSHCQCRHCPRHGIQKEGVDVATS
FT                   KPKTVDIPEKESS"
FT   CDS             303..1079
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="AV1"
FT                   /db_xref="GOA:B5A467"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:B5A467"
FT                   /protein_id="ACG69441.1"
FT                   /translation="MAKRLFDMVGSSPLRITRRKLNFGSPSRLIASAVTAPDMGFKRRA
FT                   WTWRPANRKPWIYRRRRAPDVPRGCEGPCKVQSFEKRHDVTHTGGVLCISDVTRGNGIT
FT                   HRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVIFWLVRDRRPFGSPMDLGQVFNMYDN
FT                   EPSTATIKNDLRDRYQVLHKWHASVTGGVYASKEQAIIKKFYRVNNYVVYNHQEAAKYE
FT                   NHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN"
FT   CDS             complement(1076..1474)
FT                   /codon_start=1
FT                   /product="AC3"
FT                   /note="replication enhancer protein"
FT                   /db_xref="GOA:B5A468"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:B5A468"
FT                   /protein_id="ACG69442.1"
FT                   /translation="MDSRTGEPITAARFNNGVFIWTVPNPLYFRVISHMSRPFNLDQDI
FT                   IHLRIQFNHNLRQALQIHKCFLSFKVWTRSRIQTGMFLRVFKTQVIRYLDRLGVISINL
FT                   VIKAVDHVLYNVLHHTMQVEQSNEIMFN"
FT   CDS             complement(1215..1613)
FT                   /codon_start=1
FT                   /product="AC2"
FT                   /db_xref="GOA:B5A469"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:B5A469"
FT                   /protein_id="ACG69443.1"
FT                   /translation="MSCSTATVPLQLLSRDARGDRSGGDKAEEDRLEVRMFIFSLANCA
FT                   NHGFTHRGTHHCSSFQQWRLYLDGPKSSVLPRHQSHEQTLQPGPGHHTPPNTIQSQSQA
FT                   STTDTQVLPELQSLDSFTDSDWDVLTSL"
FT   CDS             complement(1537..2601)
FT                   /codon_start=1
FT                   /product="AC1"
FT                   /note="rep protein"
FT                   /db_xref="GOA:B5A470"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:B5A470"
FT                   /protein_id="ACG69444.1"
FT                   /translation="MPRVNAFSVSAKNIFLTYPKCPLSKETVLDLLRNISCPSDKLFIR
FT                   VAQEKHEDGSLHIHALIQFKGKARFRNARHFDLIHPHSSSQFHPNIQGAKSSSDVKSYI
FT                   EKDGDFIDWGFFQIDGRSARGGQQTANDAAAEALNSGSAEAALAISVKMPRDYIFQYHN
FT                   LKSNLEREIFTPLRVDYVSPYPLCSFDRVPEELEIWASENIVSPAARPFRPISIVLEGD
FT                   SRIGKTMWARSLGPHNYLCGHLDLSPRVYSNDVWYNVIDDVDPHYLKHFKEFMGAQRDW
FT                   QSNTKYGKPVQVKGGIPTIFLCNPGPHSSYKEYLDEDRNAALKNWAVKNVVFDSDSPPP
FT                   APFKRRQRRQIRGG"
FT   CDS             complement(2187..2426)
FT                   /codon_start=1
FT                   /product="AC4"
FT                   /db_xref="UniProtKB/TrEMBL:B5A471"
FT                   /protein_id="ACG69445.1"
FT                   /translation="MPLSSSRVRPDSEMQDISISSILIAPPNSIQISRELSPPLMLSPI
FT                   SRRTEISSTGGSFRSMEDLLEEVNRQLMMLQRRP"
XX
SQ   Sequence 2743 BP; 781 A; 617 C; 638 G; 707 T; 0 other;
     accggatggc cgcgattttt tttaacgtgg accccacaac tgacaaacag acaaagaaaa        60
     gaaaagggaa cccagcacaa agagaaaaaa actaacgtcc cgcgcgctat aaaacttgct       120
     ggcgaaggag tagagccgca acatgtggga tccattaacc aacgagtttc ccgaaaccct       180
     gcacgggttt cgctgtatgc ttgcagtcaa atatctacaa gctctactct cttcgtacgc       240
     tcctgatacg gtcggatacg agtaccttcg tgatctgatc agcgtactac gctgtcgcga       300
     ctatggcaaa gcgtctattc gatatggtcg gatcgtcgcc gctaagaata acacgccgga       360
     aactgaactt cgggagtccc tcccgtctca ttgccagtgc cgtcactgcc ccagacatgg       420
     gattcaaaag gagggcgtgg acgtggcgac cagcaaaccg aaaaccgtgg atataccgga       480
     gaaggagagc tcctgatgtg ccgcgtggat gcgagggacc atgcaaagta cagtcattcg       540
     aaaagagaca tgatgtcacg cacacggggg gcgttctatg tatatctgac gtcacacgcg       600
     gcaatggtat cacgcataga gtgggtaaga gattctgcgt gaaatccgtc tatgtacttg       660
     gcaagatttg gatggacgag aacatcaaga cgaagaacca tactaacagc gtgatattct       720
     ggctggtcag agacaggcgt ccatttggca gtccaatgga cctgggccaa gtctttaaca       780
     tgtatgataa cgagcccagt acagccacta tcaagaacga tttgagggat agatatcaag       840
     tgttacacaa atggcacgcg tcggttactg gtggtgtcta tgcgtctaag gaacaagcta       900
     taatcaagaa gttctacaga gtcaataatt atgtggtcta caatcaccag gaagccgcga       960
     aatacgaaaa ccatactgag aatgcgttat tattgtacat ggcatgtacg catgcatcaa      1020
     atccagtgta tgcaacattg aaaatacgca tatatttcta cgactcagta tcaaattaat      1080
     taaacattat ttcattgctc tgttcaacct gcatcgtatg atgcagtaca ttatacaata      1140
     catgatctac agctttaatt acaagattaa tagaaattac acctaatcta tctaaatatc      1200
     taataacttg agtcttaaag actcgtaaga acatcccagt ctgaatccgt gaacgagtcc      1260
     agactttgaa gctcaggaag cacttgtgta tctgtagtgc ttgcctgaga ttgtgattga      1320
     attgtattcg gaggtgtatg atgtcctggt ccaggttgaa gggtctgctc atgtgactga      1380
     tgacgcggaa gtacagagga tttgggaccg tccagataaa gacgccattg ttgaaacgag      1440
     ctgcagtgat gggttcccct gtgcgtgaat ccatgattcg cgcagttagc gagagaaaat      1500
     atgaacatcc gcacttcaag tcgatcctcc tccgccttat ccccccctga tctgtcgcct      1560
     ctggcgtctc ttgaaaggag ctggaggggg actgtcgctg tcgaacacga cattcttaac      1620
     agcccagttc tttaatgctg cgttcctatc ttcgtctaaa tactctttat agctcgaatg      1680
     gggcccagga ttgcagagga agattgtcgg aatgcctcct ttaacttgaa cgggctttcc      1740
     atactttgtg ttgctttgcc agtctctctg ggcccccata aattccttga agtgcttgag      1800
     ataatgcgga tcaacatcat caatgacgtt ataccatacg tcattactat agactcttgg      1860
     actgagatcc aagtgaccgc ataaataatt gtgtgggccg agagaccgag cccacattgt      1920
     cttcccaata cgactatcac cctctaaaac aatacttatg ggtctaaaag gccgcgcagc      1980
     gggactgaca atattttctg aggcccaaat ctcgagttct tctggaactc gatcaaacga      2040
     acaaagagga taaggagaaa cataatctac tctaagaggt gtaaatatct ccctctctag      2100
     attggacttt aaattatgat actgaaaaat ataatctctg ggcatcttca cggatatagc      2160
     tagagcagct tctgcagacc cagagtttaa ggcctccgct gcagcatcat tagctgtctg      2220
     ttgacctcct ctagcagatc ttccatcgat ctgaaagaac ccccagtcga tgaaatctcc      2280
     gtccttctcg atataggact taacatcaga ggaggactta gctccctgga tatttggatg      2340
     gaattgggag gagctatgag gatggatgag atcgaaatgt cttgcatttc tgaatctggc      2400
     cttacccttg aactggataa gggcatggat atgcagtgac ccatcctcgt gtttctcctg      2460
     cgcgactcta ataaataatt tatcagaagg acaggatatg tttcgcagga gatccaagac      2520
     tgtctccttg gataatgggc atttgggata agtgaggaat atgtttttag cgctaactga      2580
     aaatgcgtta acacgaggca ttttaaacag agggtattgg ggacgctgta aaactctcta      2640
     caattgggga cttgggggac gcatttatac cagtgtcccc aaatggcacg cttgtaattt      2700
     ttgtgaaaat cccctgtcca acagcggcca tccgattaat att                        2743
//