ID EU685324; SV 1; circular; genomic DNA; STD; VRL; 2780 BP. XX AC EU685324; XX DT 29-DEC-2008 (Rel. 98, Created) DT 29-DEC-2008 (Rel. 98, Last updated, Version 1) XX DE African cassava mosaic virus isolate ACMV-[NG:Rc:03] segment DNA-A, DE complete sequence. XX KW . XX OS African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2780 RX DOI; 10.1007/s00705-008-0169-8. RX PUBMED; 18661095. RA Alabi O.J., Ogbe F.O., Bandyopadhyay R., Lava Kumar P., Dixon A.G., RA Hughes J., Naidu R.A.; RT "Alternate hosts of African cassava mosaic virus and East African cassava RT mosaic Cameroon virus in Nigeria"; RL Arch. Virol. 153(9):1743-1747(2008). XX RN [2] RP 1-2780 RA Alabi O.J., Ogbe F.O., Bandyopadhyay R., Lava-Kumar P., Dixon A.G.O., RA Hughes J., Rayapati N.A.; RT ; RL Submitted (05-APR-2008) to the INSDC. RL Plant Pathology, Washington State University, 24106 N. Bunn Road, Prosser, RL WA 99350, USA XX DR MD5; cc9b2eb9e02b374750219ae24be1626e. XX FH Key Location/Qualifiers FH FT source 1..2780 FT /organism="African cassava mosaic virus" FT /segment="DNA-A" FT /host="Ricinus communis" FT /isolate="ACMV-[NG:Rc:03]" FT /mol_type="genomic DNA" FT /country="Nigeria" FT /db_xref="taxon:10817" FT gene 135..476 FT /gene="AV2" FT CDS 135..476 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:B8QSF2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B8QSF2" FT /protein_id="ACF42205.1" FT /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSTLGHDLVRDL FT VSVIRARNYVEATRRYHHFHSRLEGASKAELRQPIQEPCNCPHCPRHKPKTGLDEQAHV FT QKAHDVQDV" FT gene complement(273..638) FT /gene="AC5" FT CDS complement(273..638) FT /codon_start=1 FT /gene="AC5" FT /product="unknown" FT /db_xref="GOA:B8QSF3" FT /db_xref="UniProtKB/TrEMBL:B8QSF3" FT /protein_id="ACF42204.1" FT /translation="MDLIQNLFPTLCVSPGPRVTSLITLQIPRCFTSSLCSNDWTLHGP FT SQPLGMSGLLYILYIMGFLYMGLFIQARFRFVTWTVGAVARFLYGLSKFSLRRTFEPGV FT EMMISPGRFDIITSPDN" FT gene complement(277..1005) FT /gene="AC5_4" FT CDS complement(280..1005) FT /codon_start=1 FT /gene="AC5_4" FT /product="unknown" FT /db_xref="GOA:B8QSF4" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:B8QSF4" FT /protein_id="ACF42200.1" FT /translation="MSTCHVQKQCILCVILVLPCLLMIICYVMIQPVKPFDQRLLLHAR FT WTTNNSGMKFLRTLKPIPQIVLNCCSTGLIIKHVKYLPKVLGRIAIRPSIPQQVKHHII FT RVILLLNIFIHPDLPKNVNGLDTKPLSDSVCQPRPTCHVTNHLTDTKVLHIIPLLKRLD FT LTWAFTAPRYVWASIHPVHHGLSVHGPVHPGPFSVCDVDSGGSCTVPVWAVEVQPSTHL FT RAWSGNDDISWSLRHNYEP" FT gene 295..1074 FT /gene="AV1" FT CDS 295..1071 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:B8QSF5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B8QSF5" FT /protein_id="ACF42199.1" FT /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAW FT MNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTH FT RVGKRFCIKSIYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNTPQDFGQIFNMFDN FT EPSTATIKNDLRDRFQCPEEFHATVIGGPSGMKEQALVKRFYRLNHHVTYNHQEAGKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN" FT gene complement(1068..1472) FT /gene="AC3" FT CDS complement(1068..1472) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:B8QSF6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B8QSF6" FT /protein_id="ACF42203.1" FT /translation="MDLRTGELITAPQAMSGVYTWEINNPLYFTITRHQQRPFLLNQDI FT ITVQVRFNHNLRKELGIHKCFLNFKIWTTLRPQTGLFLRVFRYQVLKYLDTIGVISIND FT VIRAAAHVLFNVLEKTIECQLTHEIKFNVY" FT gene complement(1213..1620) FT /gene="AC2" FT CDS complement(1213..1620) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:B8QSF7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B8QSF7" FT /protein_id="ACF42202.1" FT /translation="MQSSSPSQNHSTQVPIKVSHRQFKKRAIRRRRVDLVCGCSYYLHI FT NCSNHGFTHRGTHHCSSSDEWRVYLGNKQSPVFHNHQAPTTTIPAEPGHHNSPGSIQSQ FT PAEGAGDSQMFSQLQDLDDLTASDWSFLKGL" FT gene complement(1529..2605) FT /gene="AC1" FT CDS complement(1529..2605) FT /codon_start=1 FT /gene="AC1" FT /product="replication protein" FT /db_xref="GOA:B8QSF8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B8QSF8" FT /protein_id="ACF42198.1" FT /translation="MRTPRFRVQAKNVFLTYPKCSIPKEHLLSFFQTLSLPSNPKFIKI FT CRELHQNGEPHLHALIQFEGKITITNNRLFDCVHPSCSTTFHPNIQGAKSSSDVESYLD FT KDGDTVEWGQFQIDGRSARGGQQSANDAYAKALDSGGKSEALNVIRELVPKDFVLQFHN FT LNSNLDRIFQEPPAPYVSPFPCSSFDQVPDELEEWVADDVRDSAARPWRPNSIVIEGDS FT RTGKTIWARSLGPHNYLCGHLDLSPKVFNNAAWYNVIDDVDPHYLKHFKEFMGSQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQAALKAWALKNAIFITLTEPLY FT SGSDQSQSQTIQEASHPA" FT gene complement(2149..2700) FT /gene="AC4" FT CDS complement(2149..2700) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /note="host activation protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B8QSF9" FT /protein_id="ACF42201.1" FT /translation="MPFRDTYIMSPINRRRCSRVSLVECLQLTWSTCALLVLEFKPRMS FT FSHTQSVLYPKNTCCHSFKHYLSHQTLSSLKSVESCIRMGNLTCMPSSNSRAKSRLRTI FT VSSIVYTQAVAPLSTPTFKVPNQAQMSSPIWIRTETPSNGDNFRSMGDLLEAVNNQRMM FT LTPKRLTAAVSPKLLMSFGN" XX SQ Sequence 2780 BP; 753 A; 573 C; 689 G; 765 T; 0 other; accggttggc cccgcccccc tttaaagtgg tccccgcgca ctacttatgt cggccaatta 60 tgctgtagct ttaaaggtta attatgagtg gtggaccact atatacttac aggcgaagtt 120 gttgctagtg cgcaatgtgg gatccactgg tgaatgagtt tccagactcg gtgcatgggc 180 ttaggtgtat gcttgcaatt aaatatttgc aggctttaga ggatacgtac gagcccagca 240 ctttgggcca cgatctggtt agagatctag tctcagttat cagggctcgt aattatgtcg 300 aagcgaccag gagatatcat catttccact ccaggctcga aggtgcgtcg aaggctgaac 360 ttcgacagcc catacaggaa ccgtgcaact gcccccactg tccacgtcac aaaccgaaaa 420 cgggcctgga tgaacaggcc catgtacaga aagcccatga tgtacaggat gtatagaagc 480 ccagacatac ctaggggctg tgaaggccca tgtaaggtcc aatcgtttga gcagagggat 540 gatgtgaagc accttggtat ctgtaaggtg attagtgacg tgacacgtgg gcctgggctg 600 acacacagag tcggaaagag gttttgtatc aagtccattt acattcttgg gaagatctgg 660 atggatgaaa atattaagaa gcagaatcac acgaataatg tgatgtttta cctgctgagg 720 gatagaaggc cttatggcaa tacgccccaa gactttgggc agatatttaa catgtttgat 780 aatgagccca gtactgcaac aattaagaac gatttgaggg ataggtttca gtgtcctgag 840 gaatttcatg ccactgttat tggtggtcca tctggcatga aggagcaagc gttggtcaaa 900 aggttttaca ggttgaatca tcacgtaaca tataatcatc aggaggcagg gaagtacgag 960 aatcacacag agaatgcatt gcttctgtac atggcatgta ctcatgcctc caaccctgta 1020 tatgctacgt tgaaaatacg tatatacttc tatgacagta ttggcaatta ataaacattg 1080 aattttattt catgagtcaa ctgacactca atagtttttt caagtacatt gaacaaaaca 1140 tgagcagcag ctctaattac atcgttaatg gagataacac ctatagtatc caagtattta 1200 agtacttggt atctaaagac ccttaagaaa agaccagtct gaggccgtaa ggtcgtccag 1260 atcttgaagt tgagaaaaca tttgtgaatc cccagctcct tccgcaggtt gtgattgaat 1320 cgaacctgga ctgttatgat gtcctggttc agcaggaatg gtcgttgttg gtgcctggtg 1380 attgtgaaat acaggggatt gtttatttcc caagtataca cgccactcat cgcttgagga 1440 gcagtgatga gttcccctgt gcgtaaatcc atgattggag cagttgatat ggaggtaata 1500 tgaacagcca cagacaagat ccactctcct acgccggatg gctcgcttct tgaattgtct 1560 gtgactgact ttgatcggaa cctgagtaga gtggttctgt gagggtgatg aagattgcat 1620 tctttaatgc ccaggccttt agcgctgctt gcttttcctc gtctagaaac tctttatagg 1680 acgaggtagg tcctggattg cagaggaaga tagtgggaat gccaccttta atttgaacgg 1740 gtttcccgta cttcgtgttg gactgccagt ccctctggga ccccatgaat tccttaaagt 1800 gctttaggta gtggggatcg acgtcatcaa tgacgttgta ccaggcagca ttattgaaga 1860 cctttggact aaggtccagg tgtccacaca gataattgtg tgggcctaaa gatctggccc 1920 atatcgtctt ccctgttctg ctatcacctt ctattacaat actattgggt ctccatggcc 1980 gcgcagcgga atccctgaca tcatcagcga cccattcttc aagttcatca ggaacttggt 2040 caaaggaaga acatgggaag ggagaaacat aaggagcggg tggctcctgg aaaatcctat 2100 ctaaattact atttagatta tgaaactgaa gtacaaagtc ctttgggact aattcccgaa 2160 tgacattaag agcttcggac ttaccgccgc tgtcaagcgc tttggcgtaa gcatcattcg 2220 ctgattgttg accgcctcta gcagatcgcc catcgatctg aaattgtccc cattcgacgg 2280 tgtctccgtc cttatccaga taggactcga catctgagct tgatttggca ccttgaatgt 2340 tggggtggaa agtggtgcta cagcttgggt gtacacaatc gaagagacga ttgttcgtaa 2400 tcgtgatttt gccctcgaat tggatgaggg catgcaagtg aggttcccca ttctgatgca 2460 gctctctaca gattttaatg aacttagggt ttgatgggag agatagtgtt tgaaagaatg 2520 acagcaggtg ttctttgggt atagaacact ttgggtatgt gagaaagaca ttcttggctt 2580 gaactctaaa acgaggagtg cgcatgttga ccaagtcaat tggagacact caactagaga 2640 cactcttgag catctcctcc tgttaattgg agacattata taggtgtctc taaatggcat 2700 tcttgtaata agttgaactt taatttgaat gaaaaggctc aaaaggcgcg gaacacccaa 2760 ggggccaacc gtttaatatt 2780 //