ID EU685318; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC EU685318; XX DT 29-DEC-2008 (Rel. 98, Created) DT 29-DEC-2008 (Rel. 98, Last updated, Version 1) XX DE African cassava mosaic virus isolate ACMV-[NG:Mg:03] segment DNA-A, DE complete sequence. XX KW . XX OS African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RX DOI; 10.1007/s00705-008-0169-8. RX PUBMED; 18661095. RA Alabi O.J., Ogbe F.O., Bandyopadhyay R., Lava Kumar P., Dixon A.G., RA Hughes J., Naidu R.A.; RT "Alternate hosts of African cassava mosaic virus and East African cassava RT mosaic Cameroon virus in Nigeria"; RL Arch. Virol. 153(9):1743-1747(2008). XX RN [2] RP 1-2781 RA Alabi O.J., Ogbe F.O., Bandyopadhyay R., Lava-Kumar P., Dixon A.G.O., RA Hughes J., Rayapati N.A.; RT ; RL Submitted (04-APR-2008) to the INSDC. RL Plant Pathology, Washington State University, 24106 N. Bunn Road, Prosser, RL WA 99350, USA XX DR MD5; 06475c25a1b1cd469425a7466bd70df6. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="African cassava mosaic virus" FT /segment="DNA-A" FT /host="Manihot glaziovii" FT /isolate="ACMV-[NG:Mg:03]" FT /mol_type="genomic DNA" FT /country="Nigeria" FT /db_xref="taxon:10817" FT gene 136..477 FT /gene="AV2" FT CDS 136..477 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:B8QSA9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B8QSA9" FT /protein_id="ACF42176.1" FT /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSTLGHDLVRDL FT ISVIRARNYVEATRRYHHFHSRLEGSSKAELRQPIQEPCYCPHCPRHKSKTGLDEQAHV FT QKAHDVQDV" FT gene complement(278..1006) FT /gene="AC5" FT CDS complement(281..1006) FT /codon_start=1 FT /gene="AC5" FT /product="unknown" FT /db_xref="GOA:B8QSB0" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:B8QSB0" FT /protein_id="ACF42182.1" FT /translation="MRTCHVQKQRILCVILVLPCLLMIICHVMIQPVKPFHQRLLLHAR FT WTTNNSGMKFPQHLKPIPQIVLNCCSTGLIIKHVKYLPKVLGRIAIRPSIPKQVKHHII FT SVILLLNIFIHPDLTKNVNGLDTKPLSDPVCQPRPTCHITDHLTDTKVLHIIPLLKRLD FT LTWAFTAPRYVWASIHPVHHGLSVHGPVHPGPFSICDVDSGGSSTVPVWAVEVQPSTNL FT RAWSGNDDISWSLRHNYGP" FT gene 296..1075 FT /gene="AV1" FT CDS 296..1072 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:B8QSB1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B8QSB1" FT /protein_id="ACF42177.1" FT /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAW FT MNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTH FT RVGKRFCIKSIYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNTPQDFGQIFNMFDN FT EPSTATIKNDLRDRFQVLRKFHATVIGGPSGMKEQALVKRFYRLNHHVTYNHQEAGKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN" FT gene complement(1069..1473) FT /gene="AC3" FT CDS complement(1069..1473) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:B8QSB2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B8QSB2" FT /protein_id="ACF42178.1" FT /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHQQRPFLLNQDI FT ITVQVRFNHNLRKELGIHKCFLNFTIWTTLRPQTGRFLRVFRYQVLKYLDNIGVISIND FT VIRAADHVLFNVIEKTIECQLTHEIKFNIY" FT gene complement(1214..1621) FT /gene="AC2" FT CDS complement(1214..1621) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:B8QSB3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B8QSB3" FT /protein_id="ACF42179.1" FT /translation="MQSSSPSQNHSTQVPIKVSHRQFKKRAIRRRRVDLVCGCSYYLHI FT NCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPIFHNHQAPTTTIPAEPGHHNSPGSIQSQ FT PEEGAGDSQMFSQLHDLDDLTASDWSFLKSL" FT gene complement(1530..2606) FT /gene="AC1" FT CDS complement(1530..2606) FT /codon_start=1 FT /gene="AC1" FT /product="replication protein" FT /db_xref="GOA:B8QSB4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B8QSB4" FT /protein_id="ACF42180.1" FT /translation="MRTPRFRVQAKNVFLTYPKCSIPKEHLLSFIQTLSLPSNPTFIKI FT CRELHQNGEPHLHALIQFEGKITITNNRLFDCVHPSCSTNFHPNIQGAKSSSDVKSYLD FT KDGDTVEWGQFQIDGRSARGGQQSANDAYAKALNSGSKSEALNIIRELVPKDFVLQFHN FT LNSNLDRIFQEPPTPYVSPFPCSSFDQVPDELEEWVADNVRDSAARPWRPNSIVIEGDS FT RTGKTIWARSLGPHNYLCGHLDLSPKVFNNDAWYNVIDDVDPHYLKHFKEFMGSQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQEALKAWALKNAIFITLTEPLY FT SGSNQSQSQTVQEASHPA" FT gene complement(2150..2701) FT /gene="AC4" FT CDS complement(2162..2701) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B8QSB5" FT /protein_id="ACF42181.1" FT /translation="MPFRDTYILSPINWRRCSRVSLVECLQLTWSKCELLVLEFKPRMS FT FSHTQSVLYPKNTCCHSFKHYLSHQTLRSLKSVESCIRMGNLTCMPSSNSRAKSRLRTI FT VSSIVFTQAVAPISIPTFKVPNQAQMSSPIWIRTETPSNGDNFRSMDDLLEAVNNQRMM FT LTPKRLTAAVSQKLLI" XX SQ Sequence 2781 BP; 751 A; 559 C; 687 G; 784 T; 0 other; accggttggc cccgcccccc tttaaacgtg gtccccgcgc actacttatg tcggccaatc 60 atgcggtagc gttaaaggtt atttattagt ggtggaccac tatatactta caggcgaagt 120 tgttgctagt gcgcaatgtg ggatccactg gtgaatgagt ttccagactc ggtgcatggg 180 cttaggtgta tgcttgcaat taaatatttg caggccttag aggatacata cgagcccagt 240 actttgggcc acgatctggt tagagatcta atctcagtta tcagggcccg taattatgtc 300 gaagcgacca ggagatatca tcatttccac tccaggctcg aaggttcgtc gaaggctgaa 360 cttcgacagc ccatacagga accgtgctac tgcccccact gtccacgtca caaatcgaaa 420 acgggcctgg atgaacaggc ccatgtacag aaagcccatg atgtacagga tgtatagaag 480 cccagacata cctaggggct gtgaaggccc atgtaaggtc cagtcgtttg agcaaaggga 540 tgatgtgaag caccttggta tctgtaaggt gatcagtgat gtgacacgtg ggcctgggct 600 gacacacagg gtcggaaaga ggttttgtat caagtccatt tacattcttg gtaagatctg 660 gatggatgaa aatattaaga agcagaatca cactaataat gtgatgtttt acctgcttag 720 ggatagaagg ccgtatggca atacgcccca agactttggg cagatattta acatgtttga 780 taatgagccc agtactgcaa caattaagaa cgatttgagg gataggtttc aggtgttgag 840 gaaatttcat gccactgtta ttggtggtcc atctggcatg aaggagcagg cgttggtgaa 900 aaggttttac aggttgaatc atcacgtgac atataatcat caggaggcag ggaagtacga 960 gaatcacaca gagaatgcgt tgcttttgta catggcatgt acgcatgcct ccaatcctgt 1020 atatgctacg ttgaaaatac gtatatactt ctatgacagt attggcaatt aataaatatt 1080 gaattttatt tcatgagtca actgacactc aatagttttt tcaattacat tgaacaaaac 1140 atgatcagca gctctaatga catcgttaat ggagataaca cctatattat ccaagtattt 1200 aagtacttgg tatctaaaga ctcttaagaa acgaccagtc tgaggccgta aggtcgtcca 1260 gatcgtgaag ttgagaaaac atttgtgaat ccccagctcc ttcctcaggt tgtgattgaa 1320 tcgaacctgg actgttatga tgtcctggtt cagcaggaat ggtcgttgtt ggtgcctggt 1380 gattgtgaaa tataggggat tgtttatttc ccaggtatac acgccattca ttgcttgagg 1440 agcagtgatg agttcccctg tgcgtaaatc catgattgga gcagttgata tggaggtaat 1500 aggaacagcc acagacaaga tccactctcc tacgccggat ggctcgcttc ttgaactgtc 1560 tgtgactgac tttgattgga acctgagtag agtggttctg tgagggtgat gaagattgca 1620 ttctttaatg cccaggcctt tagcgcctct tgcttttcct cgtccaggaa ctctttatag 1680 gacgaggtag gtcctggatt gcagaggaag atagtgggaa tgccaccttt aatttgaacg 1740 ggtttcccgt atttcgtgtt ggactgccag tccctctggg accccatgaa ttccttaaag 1800 tgctttaggt agtggggatc gacgtcatca atgacgttgt accaggcatc attattgaag 1860 acctttggac taaggtccag gtgtccacac aggtaattgt gtgggcctaa agatctggcc 1920 catatcgttt tccctgttct gctatcacct tctatgacaa tactattggg tctccatggc 1980 cgcgcagcgg aatcccgaac attatcagcg acccattctt caagttcatc aggaacttgg 2040 tcaaaggaag aacatgggaa gggagaaaca taaggagttg gtggctcctg gaaaatccta 2100 tctaaattac tatttagatt atgaaactga agtacaaagt cctttgggac taattcccta 2160 attatattaa gagcttctga cttactgccg ctgttaagcg ctttggcgta agcatcattc 2220 gctgattgtt gaccgcctct agcagatcgt ccatcgatct gaaattgtcc ccattcgacg 2280 gtgtctccgt ccttatccag ataggacttg acatctgagc ttgatttggc accttgaatg 2340 ttgggatgga aattggtgct acagcttggg tgaacacaat cgaagagacg attgttcgta 2400 atcgtgattt tgccctcgaa ttggatgagg gcatgcaagt gaggttcccc attctgatgc 2460 agctctcgac agattttaat gaacgtaggg tttgatggga gagatagtgt ttgaatgaat 2520 gacagcaggt gttctttggg tatagaacac tttgggtatg tgagaaagac attcttggct 2580 tgaactctaa aacgaggagt tcgcattttg accaagtcaa ttggagacac tcaactagag 2640 acactcttga gcatctcctc cagttaattg gagacaatat ataggtgtct ctaaatggca 2700 ttcttgtaat aagttgaact ttaatttgaa tgaaaaggct caaaaggcgc ggaacaccca 2760 aggggccaac cgtataatat t 2781 //