ID EU628637; SV 1; circular; genomic DNA; STD; VRL; 2695 BP. XX AC EU628637; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-G_Pas-Jic16-2002, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2695 RX DOI; 10.1099/vir.0.2008/003590-0. RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(Pt 9):2063-2074(2008). XX RN [2] RP 1-2695 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; a42e0e8fae5f8315f02386c25525d9ce. XX FH Key Location/Qualifiers FH FT source 1..2695 FT /organism="Maize streak virus" FT /host="Paspalum notatum" FT /isolate="MSV-G_Pas-Jic16-2002" FT /mol_type="genomic DNA" FT /country="Nigeria" FT /collection_date="2002" FT /db_xref="taxon:10821" FT CDS 164..472 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B6CZT2" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B6CZT2" FT /protein_id="ACF40550.1" FT /translation="MDPQNSFLVQPRVPTATPSQTGGVPWSHVGEVAILSFVGLICLYL FT LYLWVLRDLILVLKARQGRSTEELVFGEQGVDRREPIPNRSASAGPVNPGPFVPGSG" FT CDS 483..1217 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B6CZT3" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B6CZT3" FT /protein_id="ACF40551.1" FT /translation="MSTSKRKRGDDANWKKGPAKKKTSAAGLKKSVSKADRPSLQIQTL FT LHAGATMITVPSGGICDLISTYARGSDEGNRHTSETLTYKMSLDYHFDADAAACKYSNI FT GTGVVWLVYDTTPGGQAPTTKQIFAYNDSLAAWPTTWKVSREMCHRFVVKRRWLFTMET FT NGRIGSDMPPSNAIWNPCKRSINFHKFTSGLGVRTMWKNVTDGGVGSIQRGALYMCIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1723..2541) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B6CZT4" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6CZT4" FT /protein_id="ACF40552.1" FT /translation="MASSSSNRQFSHRNANTFLTYPQCPENPEIVCQMIWELVGHWNPK FT YIICAREAHRDGNLHLHALVQTDKPVRTTDPRFFDIKGFHPNIQSAKSVNKVRDYILKE FT PLALFERGTFIPRKSPFLGKSDSEGSSKKPTKDEIMREIISHSTNKQEYLSMIQKEFPY FT DWATKLQYFEYSANKLFPEIQEEFINPHPPSSPDLLCSESIKDWLQPNIFQVSPEAYML FT LQPTCYSVEDAISDLQWMDNLSSQQMKDQESRASTSSVQQELENLLGPEA" XX SQ Sequence 2695 BP; 684 A; 608 C; 679 G; 724 T; 0 other; taatattacc gcgccttctt ttcctgcgag ggcccgcaag ggcccgagcg attagcgatt 60 tgatttaaag tttagatctg ctttgtgtga tttatctaaa gcagcccaat ctaaagaaac 120 cggtcccggt cactataaat tgcctaacaa gtgcgattca tttatggatc cacagaactc 180 ctttcttgta cagccgcggg tacccacagc gactccttcg cagacaggag gagtgccgtg 240 gagtcacgtt ggcgaggtag ctattttgag ctttgttggt ttgatttgcc tttacctgct 300 ttacctttgg gtgctgagag atcttatctt agttctgaag gctcgacaag ggagatccac 360 ggaggagctg gtattcggcg aacaaggtgt ggataggaga gaacctatcc ctaatagatc 420 agcttctgca ggtccagtga atcccggacc atttgttcct ggttcgggat aagcaatcag 480 ccatgtccac gtccaagagg aagcggggag atgatgcgaa ctggaagaag gggccggcta 540 agaagaagac ttctgcagct ggcctgaaga agtctgtaag caaggccgat aggccatccc 600 tccaaattca gacactcttg catgcggggg ccacaatgat aacagtcccc tccggaggta 660 tttgcgacct catcagcacc tatgcccgag gttcagatga gggcaaccga cacaccagcg 720 agactcttac gtacaagatg tccctcgact accacttcga tgctgacgca gcagcgtgca 780 agtactccaa cattggaacc ggcgtggtct ggctggttta cgacactact cccggcggac 840 aagccccgac taccaaacag atatttgcat ataacgacag cctagctgcc tggccgacga 900 cctggaaggt gagccgggag atgtgtcacc gcttcgtggt gaaacgccgt tggctgttca 960 ccatggagac caacggtcgc atcggttcgg acatgcctcc atcgaatgcc atttggaacc 1020 cctgcaagcg gagcattaac ttccacaagt tcacgagtgg gttgggagta agaacgatgt 1080 ggaagaatgt aacagacggt ggcgttggat cgatacagag aggagccttg tatatgtgca 1140 ttgcccctgg caatggactt acatttactg cccatgggca gacccgtctg tactttaaga 1200 gtgttggcaa ccagtaatga ataaaaactc ccgttttatt atattgatga atgctgaaag 1260 cttacattaa tatgtcgtgc gatggcacga aaacacacgc tatcaataca ggggggtagt 1320 cggagggcgg ctaagggttg tgctcggcgg gcaaaacatc aaaaaatcaa gatgtatatg 1380 aatgttctgc ctccgtagga ggcagctcca ggggagaata ccacttctcc cctggctgca 1440 tgatgtatat catgcagttt gcgtcgaaat actccagctg ccctggagtc atttccttca 1500 tccaatcttc atcagagttg gctagaatga ttgtaggttt agacttcatc tgaaccttct 1560 tcttcttccc atacttagga tttacaatga actctttttg acatccaact aactgtttcc 1620 aacaaggaca gaatttaaac gggatatcat ctactatgtt gtagattgcg tcttcgttgt 1680 atgaagacca atcaacatta ttttgccagt aattatgaac ccctaggctt ctggcccaag 1740 tagattttcc agttcttgtt ggaccgacga tgtagaggct ctgctttctt gatctttcat 1800 ctgttgactg gataagttat ccatccattg aaggtcagaa attgcatcct cgacggaata 1860 acaggtaggt tgaaggagca tgtaagcttc gggactaacc tgaaagatgt taggctggag 1920 ccaatctttg attgactcac tacaaagcaa atcaggtgat gagggtggat gaggattgat 1980 gaactcttcc tgaatctcag gaaaaagttt atttgcagag tattcaaaat actgcaattt 2040 tgttgcccag tcataaggga actctttctg gatcattgag aggtactctt gcttattagt 2100 ggagtgggaa ataatctctc tcattatttc atcttttgta ggtttctttg aacttccctc 2160 tgaatcagat tttcctagga agggggactt cctaggaatg aaagtacctc tctcaaataa 2220 agccagaggt tccttgagaa tgtagtctcg aaccttgtta actgactttg cactctgaat 2280 gtttgggtgg aaccctttga tatcaaagaa ccttgggtca gttgttctta ccggtttatc 2340 cgtctggact aatgcatgta aatgcagatt tccatctcta tgtgcctctc gggcacatat 2400 gatgtactta gggttccagt gaccaacgag ctcccagatc atctgacaga cgatttctgg 2460 attttctgga cattgtggat atgttaggaa cgtgttagcg ttcctgtgtg agaactgacg 2520 gttggatgag gaggaggcca tatctgacga cggaggatga tgctagggga tggcagattg 2580 ggagctccca aactctatcc taccggtgcg ccttcgaaat ccgccgctgc cctctttata 2640 gtggttgtat tctgggccgg actgggccgg cccagcagga aaagaaggcg cgcac 2695 //