ID EU628626; SV 1; circular; genomic DNA; STD; VRL; 2687 BP. XX AC EU628626; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-E_Za-MitA-g125-2006, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2687 RX DOI; 10.1099/vir.0.2008/003590-0. RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(Pt 9):2063-2074(2008). XX RN [2] RP 1-2687 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; 23a604a4892b69baa77aac724979d0e6. DR EuropePMC; PMC2777162; 19903330. XX FH Key Location/Qualifiers FH FT source 1..2687 FT /organism="Maize streak virus" FT /host="Digitaria ciliaris" FT /isolate="MSV-E_Za-MitA-g125-2006" FT /mol_type="genomic DNA" FT /country="South Africa" FT /lat_lon="29.83 S 31.01 E" FT /collection_date="2006" FT /db_xref="taxon:10821" FT CDS 158..463 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B6CZP0" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B6CZP0" FT /protein_id="ACF40517.1" FT /translation="MDPQSAVYSLPRVPTAAPPNAGVPWSHVGEVAVLSFVALICIYLL FT YLWVLRDLILVLKARRGRSTEELIFGSEAVDRRSPIPNTLEPTAPVHPGPFVPGSG" FT CDS 474..1208 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B6CZP4" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B6CZP4" FT /protein_id="ACF40518.1" FT /translation="MSTSKRKRADEVQWNKRSTKKKASAPPVKKTGGKADRPSLQIQTL FT LHSGTTMITVPSGGVCDLISTYARGSDEGNRHTSETLTYKVGVDYHFVADAGACRYSNR FT GTGVMWLVYDTTPGGNSPSTKDIFAYPDALVAWPTTWKVSRELCHRFVVKRRWLFTMET FT DGRIGSDIPPTNQSWPPCKRNIDFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGVTFTAHGQTRLYFKSVGNQ" FT CDS complement(1713..2525) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B6CZP8" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6CZP8" FT /protein_id="ACF40519.1" FT /translation="MASSSSNRSFLHRNANTFLTYPHCPENPEIISQKLWDLVARWNPL FT YIVCAREAHRDGNMHLHALLQTDKPVRTTDARFFDIEGFHPNIQSAKSVNKVRDYILKE FT PLAVFERGTFIPRKSCFQGNTSPSEKKPNKDEIMAHIISHATSKQEYLCLVRKEFPYDW FT ATKLQYFEYSANKLFPDIQEEFISPHPPSSPDLLCNESIKDWLQPNIYQVSPEAYMLLQ FT PTCYTVDEAISDLTWMDNLSSQQMKDQESRASTSSVQQGQGNLLGPEV" XX SQ Sequence 2687 BP; 664 A; 614 C; 713 G; 696 T; 0 other; taatattacc gcgccttctt ttcctgcgag ggcccgcagg gaccgagcgt ctttgattta 60 aaggtttgat ctgctttggt ggttttttcc aaagctgccg tgtttaaaga aaccggtccc 120 gtctcactat aaattgtcta acaagtgcga ttcatccatg gatccccaga gtgctgttta 180 ctctttgccg cgggtaccca cagcagctcc gcccaacgca ggagtgccgt ggagtcacgt 240 cggcgaggta gctgttttga gctttgttgc tttgatttgc atttacttgc tttacctttg 300 ggtgctgaga gatcttatct tagtcttgaa ggcaagacgc gggaggtcca cggaggagct 360 gatatttgga tctgaagctg tggataggag gagtcctatc cctaatactt tggaaccaac 420 agctccagtg catcccggac catttgttcc tggttcggga taagcagtga gccatgtcga 480 cgtccaagag gaagcgtgcc gacgaggtgc agtggaataa gaggtccacc aagaagaaag 540 cttctgcacc gccggtgaag aagactgggg gtaaggctga caggccttcc ctccagatac 600 agactctact ccactcgggg accaccatga taaccgtacc gtcaggtggg gtctgtgacc 660 tcatcagtac atatgcccga ggatccgatg agggcaaccg tcacaccagc gaaaccctaa 720 cgtacaaagt tggggtcgac taccacttcg tcgccgacgc aggagcctgc agatactcca 780 accgcggaac aggtgtgatg tggctggtgt acgacactac ccccggcgga aactcaccgt 840 ccacgaagga catcttcgcc tatccggatg cactagtagc ttggccgacg acttggaaag 900 ttagtcggga gttgtgtcac cgcttcgtgg tgaagcggcg atggctcttc acaatggaga 960 ccgacggtcg aattggttcg gatatccctc cgaccaatca gagttggccg ccatgtaagc 1020 ggaacataga cttccacaag ttcactagcg ggttgggagt gaggacgcag tggaagaatg 1080 taacagacgg tggggtcggt gcgatacaga gaggggctct gtatatggtc attgcccctg 1140 gcaatggtgt aacgtttact gcccatgggc agacacgtct gtacttcaag agtgtgggca 1200 accagtaatg aataaaaccc cgttttatta tatctgatga atgctgaaag cttacattaa 1260 tatgtcgtgc gatggcacga aaacacgcta tcaatacagg ggggtcgggg caaagcaggc 1320 ggctataggg cgcgcccggg gcaaaacatt aaaaaaacac cgatatatga attacacttc 1380 ctccgtagga ggaagctgag ggggagaata ccatttctcc cccggcgaca taacataaat 1440 catgcagttt gcttcgaaat actccagttg ccctggagtc atttccttca tccagtcttc 1500 atccgagttg gcgaggatta ttgtaggttt agacttcatc tgaaccttct tcttcttgcc 1560 atatttagga tttacaacga actccttttg gcagccaact aactgtttcc aacaaggaca 1620 atattttaaa gggatatcat ctacgatgtt atagattgcg tcttcgttgt aggaagacca 1680 atcaacatta ttttgccagt aattatgaag ccctaaactt ctggcccaag tagatttccc 1740 tgtccttgtt ggaccgacga tgtagaggct ctgctttctt gatccttcat ctgctggctg 1800 gataagttat ccatccatgt tagatctgaa attgcttcat cgacggtata acaggtaggt 1860 tgaagaagca tgtatgcttc gggactgacc tgatagatgt taggctggag ccaatctttg 1920 attgactcat tacaaagcag atcaggtgaa gagggtggat gaggactgat gaactcttcc 1980 tgaatgtcag gaaagagttt gtttgcagag tattcgaaat actgcaattt ggtggcccag 2040 tcataaggga attccttccg aaccaagcag aggtactctt gcttggaagt ggcgtgagaa 2100 ataatgtgtg ccattatttc atctttgttt ggtttttttt cggaagggga agtatttcct 2160 tggaagcatg acttccgagg aatgaaagta cctctctcaa atactgccag tggttccttg 2220 agaatgtagt cgcgtacctt gtttacggac ttagcactct gaatgtttgg gtgaaatcct 2280 tctatgtcga aaaacctggc atcggtcgtc ctcactggtt tatccgtctg tagtaatgca 2340 tgtaagtgca tatttccatc acgatgtgcc tctcgggcac atacgatgta cagaggattc 2400 caacgagcga cgagatccca tagtttctga ctgatgattt ctggattttc tggacagtgt 2460 ggatatgtga ggaatgtgtt tgcattcctg tgtaagaacg aacggttgga tgaggaggag 2520 gccatatccg acgacggagg ctagtgctag ctcaaggcag aaacgggagc tcccaaactc 2580 tatgtaaccg gtgcgccttc gaaatccgcc gcccctattt atagacgatt tagctgggcc 2640 ggaacgggcc aggccgggcc ggcccagcag ggaaagaagg cgcgcac 2687 //