ID EU628570; SV 1; circular; genomic DNA; STD; VRL; 2690 BP. XX AC EU628570; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-A4_Za-BooB-g145-2006, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2690 RX DOI; 10.1099/vir.0.2008/003590-0. RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(Pt 9):2063-2074(2008). XX RN [2] RP 1-2690 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the INSDC. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; e201ef5735b59f406f1d218c398c72a0. XX FH Key Location/Qualifiers FH FT source 1..2690 FT /organism="Maize streak virus" FT /isolate="MSV-A4_Za-BooB-g145-2006" FT /mol_type="genomic DNA" FT /country="South Africa" FT /lat_lon="29.86 S 30.95 E" FT /collection_date="2006" FT /db_xref="taxon:10821" FT CDS 157..462 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B2BX37" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B2BX37" FT /protein_id="ACF40349.1" FT /translation="MDPQNALYYQPRVPTAAPTSGGVPWSRVGEVAILSFVALICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGGQAVDRSNPIPNLPAPPSQGNPGPFVPGTG" FT CDS 473..1207 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B2BX38" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B2BX38" FT /protein_id="ACF40350.1" FT /translation="MSTSKRKRGDDSNWSKRVPKKKPSSAGLKRAGSKADRPSLQIQTL FT QHAGTTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADAAACRYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1717..2535) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B2BX40" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B2BX40" FT /protein_id="ACF40351.1" FT /translation="MASSSSNRQFSHRNANTFLTYPKCPENPEIACQMIWELVVRWIPK FT YILCAREAHKDGSLHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKSVNRVRDYILKE FT PLAVFERGTFIPRKSPFLGKSDSEVKEKKPSKDEIMRDIISHATSKEEYLSMIQKELPF FT DWSTKLQYFEYSANKLFPEIQEEFTNPHPPSSPDLLCNESINDWLQPNIFQVSPEAYML FT LQPTCYTLEDAISDLQWMDSLSSHQMKDQESRASTSSAQQEPENLLGPEA" XX SQ Sequence 2690 BP; 689 A; 633 C; 693 G; 675 T; 0 other; taatattacc gcgccttctt ttcctgcgag ggcccggtag ggaccgagcg ctttgattta 60 aagcttggtc ctgctttgta tgatttatct aaagcagccc aatctaaaga aaccggtccc 120 gggcactata aattgcctaa caagtgcgat tcattcatgg atccacagaa cgccctgtat 180 tatcagccgc gggtacccac agcagctccg acatccggag gagtgccgtg gagtcgcgta 240 ggcgaggtag ctattttgag ctttgttgca ttgatttgct tttacctgct ttacctttgg 300 gtgctgagag accttatctt agttctgaag gctcgacaag gcagatccac ggaggagctg 360 atatttggtg gacaagctgt ggataggagc aaccctatcc ctaatctacc tgcaccacca 420 agtcagggca atcccgggcc ttttgttcca ggcacgggat aagcaatcag ccatgtccac 480 gtccaagagg aagcggggag atgattcgaa ttggagtaag cgggtgccta agaagaagcc 540 ttcttcagct gggctgaaga gggctggaag caaggccgat aggccatccc tccaaatcca 600 gaccctccag catgctggga ccaccatgat aacggtccca tccggaggag tatgtgacct 660 catcaacacc tatgcccgag gatctgacga gggcaaccgc cacaccagcg agactctgac 720 gtacaagatc gccgtcgact accacttcgt agctgacgcg gcagcctgcc gctactccaa 780 caccggaacc ggtgtaatgt ggctggtgta tgacaccact cccggcggac aagctccgac 840 cccgcaaact atatttgcct accctgacac gctaaaagcg tggccggcca catggaaagt 900 gagccgggag ctgtgtcatc gcttcgtggt gaaacggcgg tggttgttca acatggagac 960 cgacggtcgg attggttcgg atatccctcc ctcgaatgca agttggaagc cttgcaagcg 1020 caacatctac ttccacaagt tcacgagtgg gttgggagtg agaacgcagt ggaagaatgt 1080 aacggacgga ggagttggtg ccatccagag aggagctttg tacatggtca ttgcccccgg 1140 caatggcctt acatttactg cccatgggca gacccgtctg tactttaaga gtgttggcaa 1200 ccagtaatga ataaaaacgc ccgttttatt atatttgatg aatgctgaaa gcttacatta 1260 atatgtcgtg cgatggcacg aaaaaacaca cgcaaacaat acaggggggt agtcggcggg 1320 cggctaaggg tggtgctcgg cgggcagaac atcgaaaaat caagatctat atgaattaca 1380 cttcctccgt aggaggaagc acaaggggag aataccattt ctcccccggc gacataatgt 1440 aaatgatgca gtttgcctcg aaatactcca gctgccctgg agtcatttcc ttcatccaat 1500 cttcatccga gttggcgagg attattgtag gcttagactt cttctgcacc ttcttcttct 1560 taccatactt ggggtttaca atgaaatccc tctgacagcc aactaactgt ttccaacaag 1620 gacagaattt aaacggaata tcatctacga tgttgtagat tgcgtcttcg ttgtatgaag 1680 accaatcaac attattttgc cagtaattat gaacccctag gcttctggcc caagtagatt 1740 ttccggttct tgttgggccg acgatgtaga ggctctgctt tcttgatctt tcatctgatg 1800 actggataga gaatccatcc attggaggtc agaaattgca tcctcgaggg tataacaggt 1860 aggttgaagg agcatgtaag cttcgggact aacctggaag atgttaggct ggagccaatc 1920 attgattgac tcattacaaa gtaaatcagg tgaggagggt ggatgaggat tggtgaactc 1980 ttcctgaatc tcagggaaaa gcttatttgc agagtattca aaatactgca attttgtgga 2040 ccaatcaaag ggaagctctt tctggatcat ggagaggtac tcttcttttg aagtagcgtg 2100 tgaaataatg tctcgcatta tttcatcttt agaaggcttt ttttccttta cctctgaatc 2160 agattttcct aggaaggggg acttcctagg aatgaaagta cctctctcaa acacagccag 2220 aggttccttg agaatgtaat ccctcacccg gttaactgac ttggcactct gaatatttgg 2280 gtgaaaccca tttatatcaa agaaccttga gtcagatatc cttaccggct tctctgtctg 2340 gagcaatgca tgtaaatgca aacttccatc tttatgtgcc tctcgggcac atagaatgta 2400 cttgggaatc caacgaacga cgagctccca gatcatctga caggcgattt caggattttc 2460 tggacacttt ggataggtta ggaacgtgtt agcgttcctg tgtgagaact gacggttgga 2520 tgaggaggag gccatagccg acgacggagg ctgaggctga gggatggcag actgggagct 2580 ctaaactcta tagtatacct gtgcgccttc gaaatccgcc gctcccttgt cttatagtgg 2640 ttgtaaatgg gccggaccgg gccggcccag caggaaaaga aggcgcgcac 2690 //